BDGP Sequence Production Resources |
Search the DGRC for GH18334
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 183 |
Well: | 34 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6255-RA |
Protein status: | GH18334.pep: gold |
Preliminary Size: | 1305 |
Sequenced Size: | 1188 |
Gene | Date | Evidence |
---|---|---|
CG6255 | 2001-01-01 | Release 2 assignment |
CG6255 | 2001-10-10 | Blastp of sequenced clone |
CG6255 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6255 | 2008-04-29 | Release 5.5 accounting |
CG6255 | 2008-08-15 | Release 5.9 accounting |
CG6255 | 2008-12-18 | 5.12 accounting |
1188 bp (1188 high quality bases) assembled on 2001-10-10
GenBank Submission: AY089508
> GH18334.complete CTCCATTCTAAATCAGGCCCCAAAAGTTTAATTTTTTGGCCCAAAAACAA ATCCACCAGCAATCCAAGACTTAATTCCCACAAAATGTCACTAAATCGAG GAAGCAAGATGCTCCTGCGGGCGTTAACGCCCCAAATTTTGAGGCGTGGC AAGGCGGACTATGGCAAGACGGTGTGCAACCTGAAGATCAACAAGGCAAC AAAGGTTCTAGTCCAGGGATTCACCGGCAAGCAGGCCACTTTCCACTCGG AGGAGTCCATAAAGTACGGAACCAATATAGTTGGCGGTGTGAATCCCAAA AAGGGAGGTACGGAGCATCTGGGCAAGCCCGTATTCAAATCGGTGGCAGA AGCTGTGGAGAAGGCGAAGCCAGATGCCACGGTGATCTTTATACCACCTC CATCCGCCGCCGAGGGTATTTGCGCGGCTATCGAGAGTGAAATTGGCTTG ATTGTGGCCATCACCGAGGGTATTCCCCAGGCGGATATGGTGCGGATATC GCAAATGCTGAATTGCCAGGAGAAGTCCCGCCTGCTGGGACCCAACTGTC CGGGAATCATCTCGCCGGATCAGTGCAAAATCGGAATAATGCCGGGAGAT ATCCACAAGCGAGGAGTGGTGGGCATAGTCTCGCGGTCGGGAACCCTGAC CTACGAGTCCGTCCATCAGACCACCAACGTGGGATTGGGTCAGGCTCTTT GCGTTGGCCTCGGCGGGGATCCCTTTAACGGAACTAGCTTCATAGACGCC CTCAAAGTGTTTCTGTCCGACAAGGAGATCAAGGGCATTGTCATGATTGG AGAGATTGGCGGATCCGCCGAGGAAGAGGCTGCCGATTTCCTTAAGGAGA AGAACACTGGCTGCGAGGCCAAGCCAGTAGTTGGCTTCATTGCTGGACAG ACTGCTCCACCGGGTCGTCGAATGGGTCACGCCGGCGCCATCATTTCCGG TGGCAAGGGAGCGGCCAAGGACAAGGTGGCCGCCCTGGAGAAAGCGGGAG TCCGTATGACCGCCAATCCCTGCCACCTGGGCTCCACGCTCCTCGAGGAA ATGATCCGCCTGAAACTGGTGCCCAAGCCGAACAAAAAGAAGGCTCAGGC CGGGAAGAAGTAGGAGTGGCGGAACAAGTTATTGATGCCAATAAACTAAC TTAGTGCTCTTTAAATTGCTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6255-RA | 1188 | CG6255-RA | 19..1188 | 1..1170 | 5850 | 100 | Plus |
Scsalpha-RA | 1673 | Scsalpha-RA | 680..904 | 523..747 | 375 | 77.7 | Plus |
Scsalpha.a | 1495 | Scsalpha.a | 570..794 | 523..747 | 375 | 77.7 | Plus |
Scsalpha-RA | 1673 | Scsalpha-RA | 932..1159 | 775..1002 | 330 | 76.3 | Plus |
Scsalpha.a | 1495 | Scsalpha.a | 903..1039 | 866..1002 | 280 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 15285753..15286922 | 1170..1 | 5775 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 3816877..3817142 | 571..836 | 295 | 74.1 | Plus |
chr3L | 24539361 | chr3L | 3817234..3817370 | 866..1002 | 265 | 79.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 19461875..19463048 | 1174..1 | 5870 | 100 | Minus |
3L | 28110227 | 3L | 3817434..3817699 | 571..836 | 295 | 74.1 | Plus |
3L | 28110227 | 3L | 3817791..3817927 | 866..1002 | 280 | 80.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 19202706..19203879 | 1174..1 | 5870 | 100 | Minus |
3L | 28103327 | 3L | 3817434..3817610 | 571..747 | 285 | 77.4 | Plus |
3L | 28103327 | 3L | 3817791..3817927 | 866..1002 | 280 | 80.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 15285753..15286922 | 1..1170 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6255-RA | 1..1029 | 85..1113 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6255-RA | 1..1029 | 85..1113 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6255-RA | 1..1029 | 85..1113 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6255-RA | 1..1029 | 85..1113 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6255-RA | 1..1029 | 85..1113 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6255-RA | 19..1188 | 1..1170 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6255-RA | 19..1188 | 1..1170 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6255-RA | 19..1188 | 1..1170 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6255-RA | 19..1188 | 1..1170 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6255-RA | 19..1188 | 1..1170 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19461879..19463048 | 1..1170 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19461879..19463048 | 1..1170 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19461879..19463048 | 1..1170 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 15287601..15288770 | 1..1170 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19202710..19203879 | 1..1170 | 100 | Minus |
Translation from 0 to 1112
> GH18334.hyp LHSKSGPKSLIFWPKNKSTSNPRLNSHKMSLNRGSKMLLRALTPQILRRG KADYGKTVCNLKINKATKVLVQGFTGKQATFHSEESIKYGTNIVGGVNPK KGGTEHLGKPVFKSVAEAVEKAKPDATVIFIPPPSAAEGICAAIESEIGL IVAITEGIPQADMVRISQMLNCQEKSRLLGPNCPGIISPDQCKIGIMPGD IHKRGVVGIVSRSGTLTYESVHQTTNVGLGQALCVGLGGDPFNGTSFIDA LKVFLSDKEIKGIVMIGEIGGSAEEEAADFLKEKNTGCEAKPVVGFIAGQ TAPPGRRMGHAGAIISGGKGAAKDKVAALEKAGVRMTANPCHLGSTLLEE MIRLKLVPKPNKKKAQAGKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6255-PA | 342 | CG6255-PA | 1..342 | 29..370 | 1751 | 100 | Plus |
Scsalpha-PB | 328 | CG1065-PB | 20..328 | 49..357 | 1112 | 67.6 | Plus |
Scsalpha-PA | 328 | CG1065-PA | 20..328 | 49..357 | 1112 | 67.6 | Plus |
ATPCL-PF | 1095 | CG8322-PF | 546..778 | 110..333 | 214 | 30 | Plus |
ATPCL-PG | 1096 | CG8322-PG | 547..779 | 110..333 | 214 | 30 | Plus |
Translation from 84 to 1112
> GH18334.pep MSLNRGSKMLLRALTPQILRRGKADYGKTVCNLKINKATKVLVQGFTGKQ ATFHSEESIKYGTNIVGGVNPKKGGTEHLGKPVFKSVAEAVEKAKPDATV IFIPPPSAAEGICAAIESEIGLIVAITEGIPQADMVRISQMLNCQEKSRL LGPNCPGIISPDQCKIGIMPGDIHKRGVVGIVSRSGTLTYESVHQTTNVG LGQALCVGLGGDPFNGTSFIDALKVFLSDKEIKGIVMIGEIGGSAEEEAA DFLKEKNTGCEAKPVVGFIAGQTAPPGRRMGHAGAIISGGKGAAKDKVAA LEKAGVRMTANPCHLGSTLLEEMIRLKLVPKPNKKKAQAGKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22035-PA | 356 | GF22035-PA | 32..346 | 17..331 | 1338 | 82.5 | Plus |
Dana\GF24225-PA | 328 | GF24225-PA | 20..328 | 21..329 | 1017 | 67.3 | Plus |
Dana\GF13329-PA | 1097 | GF13329-PA | 548..810 | 82..331 | 210 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15952-PA | 342 | GG15952-PA | 1..342 | 1..342 | 1734 | 97.1 | Plus |
Dere\GG15160-PA | 328 | GG15160-PA | 20..328 | 21..329 | 1061 | 67.3 | Plus |
Dere\GG22311-PA | 1095 | GG22311-PA | 546..808 | 82..331 | 203 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12731-PA | 334 | GH12731-PA | 1..334 | 1..336 | 1267 | 75 | Plus |
Dgri\GH16428-PA | 328 | GH16428-PA | 20..328 | 21..329 | 1057 | 67.3 | Plus |
Dgri\GH19829-PA | 1100 | GH19829-PA | 551..813 | 82..331 | 201 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Scsalpha2-PA | 342 | CG6255-PA | 1..342 | 1..342 | 1751 | 100 | Plus |
Scsalpha1-PB | 328 | CG1065-PB | 20..328 | 21..329 | 1112 | 67.6 | Plus |
Scsalpha1-PA | 328 | CG1065-PA | 20..328 | 21..329 | 1112 | 67.6 | Plus |
ATPCL-PF | 1095 | CG8322-PF | 546..778 | 82..305 | 214 | 30 | Plus |
ATPCL-PG | 1096 | CG8322-PG | 547..779 | 82..305 | 214 | 30 | Plus |
ATPCL-PE | 1112 | CG8322-PE | 563..795 | 82..305 | 214 | 30 | Plus |
ATPCL-PD | 1112 | CG8322-PD | 563..795 | 82..305 | 214 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14987-PA | 337 | GI14987-PA | 1..333 | 1..329 | 1242 | 74.8 | Plus |
Dmoj\GI12510-PA | 328 | GI12510-PA | 20..328 | 21..329 | 1052 | 67.3 | Plus |
Dmoj\GI20417-PA | 1097 | GI20417-PA | 548..810 | 82..331 | 206 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14403-PA | 323 | GL14403-PA | 1..313 | 1..331 | 1193 | 73.6 | Plus |
Dper\GL25295-PA | 328 | GL25295-PA | 20..328 | 21..329 | 1051 | 67.3 | Plus |
Dper\GL20648-PA | 1069 | GL20648-PA | 482..800 | 27..331 | 209 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23007-PA | 340 | GA23007-PA | 1..330 | 1..331 | 1300 | 78.1 | Plus |
Dpse\GA23751-PA | 328 | GA23751-PA | 20..328 | 21..329 | 1051 | 67.3 | Plus |
Dpse\GA20986-PA | 1087 | GA20986-PA | 482..800 | 27..331 | 209 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26905-PA | 342 | GM26905-PA | 1..342 | 1..342 | 1753 | 98 | Plus |
Dsec\GM14589-PA | 328 | GM14589-PA | 20..328 | 21..329 | 1016 | 67.6 | Plus |
Dsec\GM20101-PA | 1095 | GM20101-PA | 546..808 | 82..331 | 207 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20111-PA | 421 | GD20111-PA | 134..421 | 55..342 | 1476 | 98.3 | Plus |
Dsim\GD13780-PA | 328 | GD13780-PA | 20..328 | 21..329 | 1016 | 67.6 | Plus |
Dsim\GD25577-PA | 1095 | GD25577-PA | 546..808 | 82..331 | 206 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15342-PA | 344 | GJ15342-PA | 23..333 | 19..329 | 1327 | 79.7 | Plus |
Dvir\GJ12416-PA | 328 | GJ12416-PA | 20..328 | 21..329 | 1055 | 67.3 | Plus |
Dvir\GJ20089-PA | 1098 | GJ20089-PA | 549..811 | 82..331 | 207 | 28.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16245-PA | 351 | GK16245-PA | 3..345 | 2..341 | 1282 | 74.1 | Plus |
Dwil\GK20526-PA | 328 | GK20526-PA | 20..328 | 21..329 | 1050 | 66.7 | Plus |
Dwil\GK10643-PA | 1095 | GK10643-PA | 546..808 | 82..331 | 212 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25125-PA | 342 | GE25125-PA | 1..342 | 1..342 | 1703 | 94.4 | Plus |
Dyak\Scsalpha-PA | 328 | GE21380-PA | 20..328 | 21..329 | 1057 | 67.3 | Plus |
Dyak\GE14108-PA | 1096 | GE14108-PA | 547..809 | 82..331 | 206 | 28.8 | Plus |