BDGP Sequence Production Resources |
Search the DGRC for GH18356
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 183 |
Well: | 56 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8708-RA |
Protein status: | GH18356.pep: validated full length |
Preliminary Size: | 1675 |
Sequenced Size: | 1664 |
Gene | Date | Evidence |
---|---|---|
CG8708 | 2001-01-01 | Release 2 assignment |
CG8708 | 2001-07-04 | Blastp of sequenced clone |
CG8708 | 2008-04-29 | Release 5.5 accounting |
CG8708 | 2008-08-15 | Release 5.9 accounting |
CG8708 | 2008-12-18 | 5.12 accounting |
1664 bp (1664 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051529
> GH18356.complete GTTCAGTTGCGGGTGAAAATAGAGTCTTTGACGTACGTGCAAGACAATAA TTGGACACATAACCCACTTCTTGTTTGCACAAGTGAACCATTCTGTGTTC CCAGTTGAAAGGGAAACCCCAATAAGTGCAGAATGACGAGTGCAAGTCTA TTGTCGCGTTCCCTGCTAACAGAAGCTCCGCGTTCTAAGAATCGCTCGGT GTTTACCTTGATTGCTGGTTTGGTGGTCGGCTACTGCCTGGCTCAAATCT TCTCCAGCATTGCGCCGCACGAGAGTCTCTATCCGTATCTCAGCAGACGG TTCAGCGATTCCCAGGTGGCCACCGGTGGTCAATTGGCTCCGGAGCAGAG CGGGTTGAAGCATGATCATCGCAACGACAACGTCAGCGTGGCCGAGCAGT TGAAGAAGGAGGTACGCATCCTCTGCTGGGTGATGACCAATCCCACAAAC CACAAGAAGAAGGCTCGCCATGTGAAGCGAACCTGGGGCAAGCGCTGCAA CATCTTGCTCTTCATGAGTTCCGGCGCGGATGAGGAGCTGCCCACCGTGA AGCTCGACGTGGGCGAGGGACGGGAGAATCTATGGGCCAAGGTCAAGGAG GCGTTCAAGTACGTCTATCATCACCACTATAACGACGCCGACTTCTTCTA CAAGGCCGATGACGACACTTACGCCGTGATCGAGAACATGCGGTATATGC TCTATCCGTACAATCCCGAAACACCCGTGCACTTCGGATTCAAGTTCAAG CCCTTCGTGAAGCAGGGCTACATGTCCGGCGGAGCGGGCTACATACTCAG TCGGGAGGCCCTGCGTCGCTTCGTGGTCGAGGGCATTCCGAATCCCAAGA TGTGCCTGCCGGGCACGGTGGTCAACGAGGACATCGAAATCGGGCGATGC ATGGAGAACCTGAACGTCACCGCCGGCGATTCCAGGGACGAAATCGGTCG CGGTCGCATGTTTCCCTTCATACCGGAGCATCACTTGATCCCAGCCAAGG CGGATAAAAACTTTTGGTACTGGAACTACCTTTACTACAAGACGGATGAC GTAAGTTTCGCCTGATAAGGGATAGGTATTCTTAACATCTTGTGTTCCGA CAGGGTCTCGACTGCTGCTCGGACTTGGCCATCTCCTTTCACTACGTAGC TCCGAATTCCTTCTATGTCCTGGACTATCTCATCTACCACTTGAAACCCT ACGGCCTACTGCGATCCCTGGAGCCTCTGCCCGCCAAACTCAAAGTGGGT CAGTTTCTGCCGCCTCCCGTGGAGGCCAGGGGGCGCCTGGCCAGTAACGA GGATTCCGCCGATGATTACGACAGGATCTATACGACCACGACCGAAAAGC CAAAGGAGCCCGATGCTCGGGAAATGGACTCCAAGGAGGTGGAAAAAGAG GATGCCAAATACAGGGAAAAGCTTTCAAAGGAGGACGAGGAACGCGAAGA CTCGCGAAAAACTGACAATGATTCGGAGTATACTGAGGAGGAAACGGAAA AGCGTTCCAAGTCCAAGGAAACATCGAAAGAAAATTAAAATTTATTGAGT TTACTTGGCAGGCTTTGGAACTGAGCTGTTTCTGAGTCTACGCCGCTCAT CCGGTTTATACATTTTAATAAAAATTTTCTTAGATTATTATTTTAAAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8708-RA | 1821 | CG8708-RA | 117..1761 | 1..1645 | 8225 | 100 | Plus |
CG8708-RB | 1802 | CG8708-RB | 141..1191 | 1..1051 | 5255 | 100 | Plus |
CG8708-RB | 1802 | CG8708-RB | 1191..1732 | 1104..1645 | 2710 | 100 | Plus |
C1GalTA-RA | 2014 | C1GalTA-RA | 749..1046 | 558..855 | 500 | 77.8 | Plus |
C1GalTA-RA | 2014 | C1GalTA-RA | 612..731 | 421..540 | 270 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 4046980..4048450 | 1644..174 | 7310 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 4048552..4048726 | 175..1 | 875 | 100 | Minus |
chr2L | 23010047 | chr2L | 8943345..8943779 | 855..421 | 705 | 77.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 8160659..8162130 | 1645..174 | 7360 | 100 | Minus |
2R | 25260384 | 2R | 8162232..8162406 | 175..1 | 875 | 100 | Minus |
2L | 23513712 | 2L | 8944428..8944725 | 855..558 | 500 | 77.8 | Minus |
2L | 23513712 | 2L | 8944743..8944862 | 540..421 | 270 | 81.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4046980..4048448 | 176..1644 | 99 | <- | Minus |
chr2R | 4048552..4048726 | 1..175 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8708-RA | 1..933 | 133..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8708-RB | 926..1353 | 1111..1538 | 100 | Plus | |
CG8708-RB | 1..925 | 133..1060 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8708-RB | 1..925 | 133..1060 | 99 | == | Plus |
CG8708-RB | 926..1353 | 1111..1538 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8708-RA | 1..933 | 133..1065 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8708-RB | 1..925 | 133..1060 | 99 | == | Plus |
CG8708-RB | 926..1353 | 1111..1538 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8708-RA | 24..1667 | 1..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8708-RB | 28..1084 | 1..1060 | 99 | == | Plus |
CG8708-RB | 1085..1618 | 1111..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8708-RB | 29..1085 | 1..1060 | 99 | == | Plus |
CG8708-RB | 1086..1619 | 1111..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8708-RA | 24..1667 | 1..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8708-RB | 29..1085 | 1..1060 | 99 | == | Plus |
CG8708-RB | 1086..1619 | 1111..1644 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8159461..8160929 | 176..1644 | 100 | <- | Minus |
2R | 8161033..8161207 | 1..175 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8159461..8160929 | 176..1644 | 100 | <- | Minus |
2R | 8161033..8161207 | 1..175 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8159461..8160929 | 176..1644 | 100 | <- | Minus |
2R | 8161033..8161207 | 1..175 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4046966..4048434 | 176..1644 | 100 | <- | Minus |
arm_2R | 4048538..4048712 | 1..175 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8160660..8162128 | 176..1644 | 100 | <- | Minus |
2R | 8162232..8162406 | 1..175 | 100 | Minus |
Translation from 132 to 1064
> GH18356.pep MTSASLLSRSLLTEAPRSKNRSVFTLIAGLVVGYCLAQIFSSIAPHESLY PYLSRRFSDSQVATGGQLAPEQSGLKHDHRNDNVSVAEQLKKEVRILCWV MTNPTNHKKKARHVKRTWGKRCNILLFMSSGADEELPTVKLDVGEGRENL WAKVKEAFKYVYHHHYNDADFFYKADDDTYAVIENMRYMLYPYNPETPVH FGFKFKPFVKQGYMSGGAGYILSREALRRFVVEGIPNPKMCLPGTVVNED IEIGRCMENLNVTAGDSRDEIGRGRMFPFIPEHHLIPAKADKNFWYWNYL YYKTDDVSFA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14913-PA | 452 | GF14913-PA | 13..316 | 13..306 | 1338 | 80.9 | Plus |
Dana\GF15693-PA | 390 | GF15693-PA | 1..312 | 1..306 | 1062 | 62.3 | Plus |
Dana\GF16008-PA | 358 | GF16008-PA | 24..294 | 16..304 | 620 | 44.4 | Plus |
Dana\GF24418-PA | 341 | GF24418-PA | 3..262 | 21..295 | 581 | 43.6 | Plus |
Dana\GF24419-PA | 337 | GF24419-PA | 3..266 | 21..303 | 560 | 42.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10669-PA | 453 | GG10669-PA | 1..308 | 1..306 | 1381 | 82.2 | Plus |
Dere\GG24047-PA | 388 | GG24047-PA | 1..311 | 1..306 | 1075 | 62.2 | Plus |
Dere\GG18081-PA | 374 | GG18081-PA | 60..309 | 59..302 | 599 | 47.8 | Plus |
Dere\GG24890-PA | 386 | GG24890-PA | 78..296 | 86..308 | 575 | 48.9 | Plus |
Dere\GG14745-PA | 342 | GG14745-PA | 3..246 | 21..279 | 550 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12988-PA | 420 | GH12988-PA | 10..304 | 15..306 | 1166 | 72.3 | Plus |
Dgri\GH12348-PA | 382 | GH12348-PA | 2..285 | 26..306 | 1151 | 74 | Plus |
Dgri\GH25123-PA | 389 | GH25123-PA | 1..312 | 1..306 | 1075 | 62.6 | Plus |
Dgri\GH25081-PA | 695 | GH25081-PA | 338..613 | 18..306 | 975 | 61.5 | Plus |
Dgri\GH25081-PA | 695 | GH25081-PA | 6..285 | 11..304 | 938 | 59.7 | Plus |
Dgri\GH23497-PA | 274 | GH23497-PA | 1..268 | 26..308 | 928 | 61.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8708-PD | 450 | CG8708-PD | 1..306 | 1..306 | 1648 | 100 | Plus |
CG8708-PB | 450 | CG8708-PB | 1..306 | 1..306 | 1648 | 100 | Plus |
CG8708-PC | 444 | CG8708-PC | 1..300 | 7..306 | 1591 | 97.7 | Plus |
C1GalTA-PA | 388 | CG9520-PA | 1..311 | 1..306 | 1066 | 62.2 | Plus |
C1GalTA-PC | 388 | CG9520-PC | 1..311 | 1..306 | 1066 | 62.2 | Plus |
C1GalTA-PB | 388 | CG9520-PB | 1..311 | 1..306 | 1066 | 62.2 | Plus |
tgy-PE | 373 | CG7440-PE | 86..308 | 83..302 | 598 | 50.4 | Plus |
tgy-PC | 373 | CG7440-PC | 86..308 | 83..302 | 598 | 50.4 | Plus |
CG2975-PA | 385 | CG2975-PA | 7..294 | 17..308 | 572 | 41.9 | Plus |
CG34056-PA | 341 | CG34056-PA | 3..244 | 21..278 | 531 | 42.5 | Plus |
CG34057-PB | 344 | CG34057-PB | 61..275 | 86..303 | 516 | 46.6 | Plus |
CG34057-PA | 355 | CG34057-PA | 72..286 | 86..303 | 516 | 46.6 | Plus |
CG18558-PB | 588 | CG18558-PB | 309..529 | 83..304 | 470 | 42.7 | Plus |
CG2983-PB | 344 | CG2983-PB | 62..277 | 83..310 | 460 | 41.3 | Plus |
CG3119-PA | 355 | CG3119-PA | 62..250 | 95..281 | 381 | 43.7 | Plus |
CG34452-PC | 318 | CG34452-PC | 53..267 | 95..308 | 344 | 32.9 | Plus |
CG34452-PB | 318 | CG34452-PB | 53..267 | 95..308 | 344 | 32.9 | Plus |
CG3119-PB | 184 | CG3119-PB | 62..177 | 95..208 | 277 | 46.6 | Plus |
CG34451-PC | 253 | CG34451-PC | 7..189 | 106..286 | 277 | 32.8 | Plus |
CG34451-PA | 253 | CG34451-PA | 7..189 | 106..286 | 277 | 32.8 | Plus |
CG18558-PB | 588 | CG18558-PB | 11..241 | 36..297 | 206 | 25.5 | Plus |
CG9220-PD | 832 | CG9220-PD | 75..243 | 100..258 | 152 | 29.9 | Plus |
CG9220-PC | 832 | CG9220-PC | 75..243 | 100..258 | 152 | 29.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17446-PA | 390 | GI17446-PA | 3..300 | 7..306 | 1136 | 70.2 | Plus |
Dmoj\GI12045-PA | 391 | GI12045-PA | 1..312 | 1..306 | 1101 | 64.5 | Plus |
Dmoj\GI12068-PA | 352 | GI12068-PA | 21..265 | 61..306 | 1095 | 80.5 | Plus |
Dmoj\GI12057-PA | 440 | GI12057-PA | 35..265 | 75..305 | 968 | 71.4 | Plus |
Dmoj\GI12912-PA | 264 | GI12912-PA | 10..263 | 21..308 | 873 | 59.4 | Plus |
Dmoj\GI12057-PA | 440 | GI12057-PA | 231..360 | 185..306 | 360 | 55 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26713-PA | 452 | GL26713-PA | 14..314 | 14..306 | 1286 | 81.7 | Plus |
Dper\GL25549-PA | 390 | GL25549-PA | 1..311 | 1..306 | 1071 | 61.9 | Plus |
Dper\GL14674-PA | 303 | GL14674-PA | 3..248 | 57..302 | 610 | 47 | Plus |
Dper\GL15447-PA | 379 | GL15447-PA | 75..297 | 81..308 | 605 | 49.6 | Plus |
Dper\GL16899-PA | 341 | GL16899-PA | 3..256 | 21..287 | 577 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA29031-PA | 452 | GA29031-PA | 14..314 | 14..306 | 1286 | 81.7 | Plus |
Dpse\GA21851-PA | 390 | GA21851-PA | 1..311 | 1..306 | 1071 | 61.9 | Plus |
Dpse\GA20354-PA | 369 | GA20354-PA | 61..306 | 59..304 | 621 | 47 | Plus |
Dpse\GA28803-PA | 347 | GA28803-PA | 75..295 | 81..306 | 609 | 50.4 | Plus |
Dpse\GA23793-PA | 340 | GA23793-PA | 3..256 | 21..287 | 576 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20714-PA | 446 | GM20714-PA | 1..309 | 1..306 | 1613 | 95.8 | Plus |
Dsec\GM12650-PA | 379 | GM12650-PA | 1..302 | 11..306 | 1043 | 61.3 | Plus |
Dsec\GM22770-PA | 373 | GM22770-PA | 59..308 | 59..302 | 601 | 47.4 | Plus |
Dsec\GM18370-PA | 383 | GM18370-PA | 78..292 | 87..308 | 557 | 48.6 | Plus |
Dsec\GM14363-PA | 340 | GM14363-PA | 3..246 | 21..279 | 545 | 40.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10181-PA | 446 | GD10181-PA | 1..309 | 1..306 | 1632 | 97.1 | Plus |
Dsim\GD22375-PA | 388 | GD22375-PA | 1..311 | 1..306 | 1065 | 61.5 | Plus |
Dsim\GD24465-PA | 373 | GD24465-PA | 59..308 | 59..302 | 602 | 47.4 | Plus |
Dsim\GD23186-PA | 386 | GD23186-PA | 78..295 | 87..308 | 576 | 49.5 | Plus |
Dsim\GD13582-PA | 333 | GD13582-PA | 3..246 | 21..279 | 552 | 42.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14139-PA | 441 | GJ14139-PA | 1..302 | 6..306 | 1229 | 73.4 | Plus |
Dvir\GJ14135-PA | 386 | GJ14135-PA | 1..312 | 1..306 | 1077 | 63.3 | Plus |
Dvir\GJ14138-PA | 335 | GJ14138-PA | 16..271 | 25..306 | 1047 | 70.2 | Plus |
Dvir\GJ14141-PA | 589 | GJ14141-PA | 296..531 | 70..303 | 603 | 48.5 | Plus |
Dvir\GJ15256-PA | 373 | GJ15256-PA | 73..310 | 60..302 | 591 | 46.6 | Plus |
Dvir\GJ14141-PA | 589 | GJ14141-PA | 27..246 | 30..301 | 212 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24753-PA | 440 | GK24753-PA | 3..309 | 2..306 | 1251 | 74.1 | Plus |
Dwil\GK24752-PA | 435 | GK24752-PA | 3..310 | 2..306 | 1245 | 72.8 | Plus |
Dwil\GK24751-PA | 324 | GK24751-PA | 7..267 | 49..306 | 1103 | 76.7 | Plus |
Dwil\GK14790-PA | 390 | GK14790-PA | 1..312 | 1..306 | 1058 | 61.3 | Plus |
Dwil\GK14791-PA | 371 | GK14791-PA | 1..312 | 1..306 | 1054 | 61.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23251-PA | 451 | GE23251-PA | 1..309 | 1..306 | 1452 | 92.9 | Plus |
Dyak\GE10709-PA | 388 | GE10709-PA | 1..311 | 1..306 | 1080 | 62.5 | Plus |
Dyak\GE15477-PA | 375 | GE15477-PA | 82..310 | 71..302 | 593 | 49.2 | Plus |
Dyak\GE18184-PA | 385 | GE18184-PA | 76..294 | 86..308 | 572 | 49.1 | Plus |
Dyak\GE21107-PA | 342 | GE21107-PA | 3..246 | 21..279 | 550 | 42.1 | Plus |
Translation from 132 to 1064
> GH18356.hyp MTSASLLSRSLLTEAPRSKNRSVFTLIAGLVVGYCLAQIFSSIAPHESLY PYLSRRFSDSQVATGGQLAPEQSGLKHDHRNDNVSVAEQLKKEVRILCWV MTNPTNHKKKARHVKRTWGKRCNILLFMSSGADEELPTVKLDVGEGRENL WAKVKEAFKYVYHHHYNDADFFYKADDDTYAVIENMRYMLYPYNPETPVH FGFKFKPFVKQGYMSGGAGYILSREALRRFVVEGIPNPKMCLPGTVVNED IEIGRCMENLNVTAGDSRDEIGRGRMFPFIPEHHLIPAKADKNFWYWNYL YYKTDDVSFA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8708-PD | 450 | CG8708-PD | 1..306 | 1..306 | 1648 | 100 | Plus |
CG8708-PB | 450 | CG8708-PB | 1..306 | 1..306 | 1648 | 100 | Plus |
CG8708-PC | 444 | CG8708-PC | 1..300 | 7..306 | 1591 | 97.7 | Plus |
C1GalTA-PA | 388 | CG9520-PA | 1..311 | 1..306 | 1066 | 62.2 | Plus |
C1GalTA-PC | 388 | CG9520-PC | 1..311 | 1..306 | 1066 | 62.2 | Plus |