BDGP Sequence Production Resources |
Search the DGRC for GH18370
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 183 |
Well: | 70 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11779-RC |
Protein status: | GH18370.pep: validated not full length |
Preliminary Size: | 2291 |
Sequenced Size: | 2443 |
Gene | Date | Evidence |
---|---|---|
CG5835 | 2001-01-01 | Release 2 assignment |
CG11779 | 2001-01-01 | Release 2 assignment |
CG11779 | 2001-09-19 | Blastp of sequenced clone |
CG11779 | 2008-04-29 | Release 5.5 accounting |
CG11779 | 2008-08-15 | Release 5.9 accounting |
CG5835 | 2008-08-15 | Release 5.9 accounting |
CG11779 | 2008-12-18 | 5.12 accounting |
CG5835 | 2008-12-18 | 5.12 accounting |
2443 bp (2443 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058409
> GH18370.complete ACAGTTCGAAATTCAAAGTGTTCCTTTTTCAAAATTTAGTAAAGATTGTA GATCAATTGTAGATATATCGAAATTTTTCGGCCGCAAGCGAACATTTTAC GAAATGAAGGCGACCAGTTGCAGACCAATTCCATTCATCAACTTTCGGAT TGTAAGATATTTCTATCGGCCACGACGATTGAACAAGTATTACGATATTT ACAGAATAGCTGCCCTTGTGCGGGATCGCGCCTGTCTCTTCACGTGCCAG CAGGCCTCGCAGAACCTGCAGCAGCAGCAGCCCCGCTTTTATAGTGCGCC AGGTCGCAGGGCCGGCTTCTTCTCGCAGTTCTTCGACAACATGAAGGCGG AGATGGATAAGAACAAGGAGATCAAGGACAATATCCGAAAGTTCCGTGAG GAGGCCCAGAAGCTGGAAGAATCGGATGCCCTGAAATCGGCGCGGCAAAA GTTTAACATTGTCGAATCGGAGGCGCAAAAGTCGTCTAGCATGCTAAAGG AGCAGCTGGGCGCCATCAAGGAGCGCGTAGGCGATGTTCTGGAGGACGCC AGCAAATCCCACCTGGCCAAAAAGGTTACCGAGGAGCTCTCGAAGAAGGC TAGGGGGGTCAGCGACACGATCTCCGACACCAGTGGCAAGCTGGGCCAGA CCAGCGCATTCCAGGCTATCTCTAACACGACGACGACCATCAAGAAGGAG ATGGACAGCGCGAGCATAGAGAATCGTGTCTATCGTGCTCCTGCCAAGTT GCGAAAGCGCGTCCAGCTCGTCATGAGCGATAGTGATCGCGTTGTGGAGC CCAACACGGAAGCCACTGGTATGGAGCTGCACAAGGACTCCAAGTTCTAC GAGTCGTGGGAGAACTTCAAGAACAACAATACCTACGTGAACAAGGTGCT TGACTGGAAGGTTAAATACGACGAGTCCGAGAACCCTGTTATTCGTGCCT CCCGCCTGCTGACCGATAAAGTGTCCGACGTCATGGGTGGACTCTTTTCA AAGACAGAGCTTTCGGAAACGATGACGGAGCTGGTGAAAATCGATCCGAG CTTTGATCAGAAGGATTTCCTCCGCGATTGCGAAACGGACATCATTCCAA ATATTCTGGAATCGATTGTCCGTGGGGATCTGGAGATTCTGAAGGATTGG TGCTTTGAGAGCACTTTCAATATTATCGCAAATCCCATTAAGGAGGCTAA GAAGGCCGGCGTGTACCTGGACTCCAAGATCCTCGACATCGAGAACATTG AACTGGCAATGGGCAAGGTTATGGAGCAGGGCCCGGTACTGATTATCACG TTCCAAGCCCAGCAGATTATGTGCGTGCGGGACCAGAAGAGTCAGGTCGT CGAGGGAGATCCGGAGAAGCCCAAGCCAAGCCCTCGCAGGATTTAAACAA ACCGCAGACGAAGGAGCCAAGTGATCTGGGTGCAGGAGCTGGAGCAGCAC GAGGAGTGCCGGTGGCTGCCAAAAATAAGACAGCTGTCGTGGAGGATACT TCCGACGATTCCGACTCAGAGGCGGAATCGGAGGAGCAGCAGCGGCGGTC ATATCCCCACCGCGACGAGGACCAACTGAACTCGGCCACCAATTTGGTTT TGGCACAGAACTACAAGTACGATGTGGAGATCCTGGAATCCGGCGATGCC GACCAAGACGACAGTAGCATGGATGACGTGGACGATCTGGAGGAGCGTTT CAAGGGACGCGGTGTGATCTTCAGCACGGACACCGAAACCTTCGCCAACG AGAACATCGAGATGAGCCCGCTGAACGTGCAGGCGGATGCGGTTAGCCAG GGACACGTGCTGCTCGGCATCGTGGTGGTGGCACTGGCCTTGGTCTCCAT CGGCCTGTACGCCGGCCTGGTCATATGGCGCTCGCACCTGGAGCAGCGGT ATGGAATGCGCGAACGACTGGTCAATCACGACTTGGAGGATGAAGCGGCT GGTGTCGACGACGTCGATTATCAGGTCTATGCGCCAACCACGACGGCAGC TACGCCTAGGGCGTAGTCCGTTTCGAAATCTGGTCCGATTCGATTCGATC CGATACGACGGTGGGCTTCAATTGGACCTGGTTTCGGTTTAAAGTGCACA CTCACCACACAATTCAGACGAGACGACGACGATGGCAATTCATTGCAGCC TCAGCTAGGATGGTGGTGGAGAGACGGTGCTCAATCGTCTAATGTATGCC ATAAATTTCCACGACAAGCTGAAAAGCATTCCGCTTCCCAATTACACTCT AATGGCGTTGCTAAAGGTCACGCCGATTTCTAACAGCGCAGTTGACAAGA CCAATTAGTTAGTAAGTTTCTGTGATATTGTTCTAGAGATTCTTTTGTAC GTCCTTGCACTAACAATACGCATAGAACCCACGTTGCTAATCGATAATAA AAACTATATGTAAATGTAAATGAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 14979203..14979754 | 1369..818 | 2715 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 14979819..14980362 | 820..277 | 2690 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 14972607..14973139 | 2425..1893 | 2635 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 14973212..14973615 | 1893..1493 | 1895 | 98.5 | Minus |
chr3R | 27901430 | chr3R | 14983569..14983767 | 199..1 | 995 | 100 | Minus |
chr3R | 27901430 | chr3R | 14975438..14975565 | 1495..1368 | 610 | 98.4 | Minus |
chr3R | 27901430 | chr3R | 14980422..14980502 | 280..200 | 405 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 19155247..19155798 | 1369..818 | 2760 | 100 | Minus |
3R | 32079331 | 3R | 19155863..19156406 | 820..277 | 2720 | 100 | Minus |
3R | 32079331 | 3R | 19148628..19149161 | 2426..1893 | 2670 | 100 | Minus |
3R | 32079331 | 3R | 19149234..19149634 | 1893..1493 | 2005 | 100 | Minus |
3R | 32079331 | 3R | 19159610..19159808 | 199..1 | 995 | 100 | Minus |
3R | 32079331 | 3R | 19151488..19151615 | 1495..1368 | 640 | 100 | Minus |
3R | 32079331 | 3R | 19156466..19156546 | 280..200 | 405 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 18896078..18896629 | 1369..818 | 2760 | 100 | Minus |
3R | 31820162 | 3R | 18896694..18897237 | 820..277 | 2720 | 100 | Minus |
3R | 31820162 | 3R | 18889459..18889992 | 2426..1893 | 2670 | 100 | Minus |
3R | 31820162 | 3R | 18890065..18890465 | 1893..1493 | 2005 | 100 | Minus |
3R | 31820162 | 3R | 18900441..18900639 | 199..1 | 995 | 100 | Minus |
3R | 31820162 | 3R | 18892319..18892446 | 1495..1368 | 640 | 100 | Minus |
3R | 31820162 | 3R | 18897297..18897377 | 280..200 | 405 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 14972607..14973139 | 1893..2425 | 99 | <- | Minus |
chr3R | 14973213..14973613 | 1495..1892 | 98 | <- | Minus |
chr3R | 14975439..14975563 | 1370..1494 | 98 | <- | Minus |
chr3R | 14979203..14979753 | 819..1369 | 99 | <- | Minus |
chr3R | 14979821..14980358 | 281..818 | 99 | <- | Minus |
chr3R | 14980422..14980502 | 200..280 | 100 | <- | Minus |
chr3R | 14983569..14983767 | 1..199 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11779-RC | 1..1293 | 104..1396 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11779-RA | 1..1273 | 104..1376 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11779-RA | 1..1273 | 104..1376 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11779-RC | 1..1293 | 104..1396 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11779-RA | 1..1273 | 104..1376 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11779-RC | 71..2495 | 1..2425 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11779-RA | 71..1446 | 1..1376 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11779-RA | 71..1446 | 1..1376 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11779-RC | 71..2495 | 1..2425 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11779-RA | 71..1446 | 1..1376 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19148629..19149161 | 1893..2425 | 100 | <- | Minus |
3R | 19149235..19149632 | 1495..1892 | 100 | <- | Minus |
3R | 19151489..19151613 | 1370..1494 | 100 | <- | Minus |
3R | 19155247..19155797 | 819..1369 | 100 | <- | Minus |
3R | 19155865..19156402 | 281..818 | 100 | <- | Minus |
3R | 19156466..19156546 | 200..280 | 100 | <- | Minus |
3R | 19159610..19159808 | 1..199 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19148629..19149161 | 1893..2425 | 100 | <- | Minus |
3R | 19149235..19149632 | 1495..1892 | 100 | <- | Minus |
3R | 19151489..19151613 | 1370..1494 | 100 | <- | Minus |
3R | 19155247..19155797 | 819..1369 | 100 | <- | Minus |
3R | 19155865..19156402 | 281..818 | 100 | <- | Minus |
3R | 19156466..19156546 | 200..280 | 100 | <- | Minus |
3R | 19159610..19159808 | 1..199 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19148629..19149161 | 1893..2425 | 100 | <- | Minus |
3R | 19149235..19149632 | 1495..1892 | 100 | <- | Minus |
3R | 19151489..19151613 | 1370..1494 | 100 | <- | Minus |
3R | 19155247..19155797 | 819..1369 | 100 | <- | Minus |
3R | 19155865..19156402 | 281..818 | 100 | <- | Minus |
3R | 19156466..19156546 | 200..280 | 100 | <- | Minus |
3R | 19159610..19159808 | 1..199 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 14974351..14974883 | 1893..2425 | 100 | <- | Minus |
arm_3R | 14974957..14975354 | 1495..1892 | 100 | <- | Minus |
arm_3R | 14977211..14977335 | 1370..1494 | 100 | <- | Minus |
arm_3R | 14980969..14981519 | 819..1369 | 100 | <- | Minus |
arm_3R | 14981587..14982124 | 281..818 | 100 | <- | Minus |
arm_3R | 14982188..14982268 | 200..280 | 100 | <- | Minus |
arm_3R | 14985332..14985530 | 1..199 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18900441..18900639 | 1..199 | 100 | Minus | |
3R | 18889460..18889992 | 1893..2425 | 100 | <- | Minus |
3R | 18890066..18890463 | 1495..1892 | 100 | <- | Minus |
3R | 18892320..18892444 | 1370..1494 | 100 | <- | Minus |
3R | 18896078..18896628 | 819..1369 | 100 | <- | Minus |
3R | 18896696..18897233 | 281..818 | 100 | <- | Minus |
3R | 18897297..18897377 | 200..280 | 100 | <- | Minus |
Translation from 0 to 1395
> GH18370.hyp QFEIQSVPFSKFSKDCRSIVDISKFFGRKRTFYEMKATSCRPIPFINFRI VRYFYRPRRLNKYYDIYRIAALVRDRACLFTCQQASQNLQQQQPRFYSAP GRRAGFFSQFFDNMKAEMDKNKEIKDNIRKFREEAQKLEESDALKSARQK FNIVESEAQKSSSMLKEQLGAIKERVGDVLEDASKSHLAKKVTEELSKKA RGVSDTISDTSGKLGQTSAFQAISNTTTTIKKEMDSASIENRVYRAPAKL RKRVQLVMSDSDRVVEPNTEATGMELHKDSKFYESWENFKNNNTYVNKVL DWKVKYDESENPVIRASRLLTDKVSDVMGGLFSKTELSETMTELVKIDPS FDQKDFLRDCETDIIPNILESIVRGDLEILKDWCFESTFNIIANPIKEAK KAGVYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKSQVV EGDPEKPKPSPRRI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11779-PA | 459 | CG11779-PA | 1..422 | 35..456 | 2144 | 100 | Plus |
CG11779-PE | 428 | CG11779-PE | 1..391 | 66..456 | 1969 | 99.7 | Plus |
CG11779-PB | 428 | CG11779-PB | 1..391 | 66..456 | 1969 | 99.7 | Plus |
Translation from 1 to 1395
> GH18370.pep QFEIQSVPFSKFSKDCRSIVDISKFFGRKRTFYEMKATSCRPIPFINFRI VRYFYRPRRLNKYYDIYRIAALVRDRACLFTCQQASQNLQQQQPRFYSAP GRRAGFFSQFFDNMKAEMDKNKEIKDNIRKFREEAQKLEESDALKSARQK FNIVESEAQKSSSMLKEQLGAIKERVGDVLEDASKSHLAKKVTEELSKKA RGVSDTISDTSGKLGQTSAFQAISNTTTTIKKEMDSASIENRVYRAPAKL RKRVQLVMSDSDRVVEPNTEATGMELHKDSKFYESWENFKNNNTYVNKVL DWKVKYDESENPVIRASRLLTDKVSDVMGGLFSKTELSETMTELVKIDPS FDQKDFLRDCETDIIPNILESIVRGDLEILKDWCFESTFNIIANPIKEAK KAGVYLDSKILDIENIELAMGKVMEQGPVLIITFQAQQIMCVRDQKSQVV EGDPEKPKPSPRRI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18940-PA | 461 | GF18940-PA | 4..424 | 36..456 | 1944 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16152-PA | 459 | GG16152-PA | 1..422 | 35..456 | 2181 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18477-PA | 452 | GH18477-PA | 2..415 | 43..456 | 1779 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11779-PA | 459 | CG11779-PA | 1..422 | 35..456 | 2144 | 100 | Plus |
CG11779-PE | 428 | CG11779-PE | 1..391 | 66..456 | 1969 | 99.7 | Plus |
CG11779-PB | 428 | CG11779-PB | 1..391 | 66..456 | 1969 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24055-PA | 452 | GI24055-PA | 5..415 | 46..456 | 1809 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23705-PA | 458 | GL23705-PA | 13..421 | 48..456 | 1804 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11194-PB | 444 | GA11194-PB | 5..407 | 53..456 | 1741 | 80.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10044-PA | 458 | GM10044-PA | 1..421 | 35..456 | 2170 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20131-PA | 304 | GD20131-PA | 1..267 | 190..456 | 1395 | 98.9 | Plus |
Dsim\GD20130-PA | 141 | GD20130-PA | 1..139 | 35..173 | 710 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23681-PA | 428 | GJ23681-PA | 1..391 | 66..456 | 1740 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13236-PA | 457 | GK13236-PA | 1..420 | 35..456 | 1838 | 81.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25149-PA | 459 | GE25149-PA | 1..422 | 35..456 | 2183 | 97.2 | Plus |