BDGP Sequence Production Resources |
Search the DGRC for GH18460
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 184 |
Well: | 60 |
Vector: | pOT2 |
Associated Gene/Transcript | MtnA-RA |
Protein status: | GH18460.pep: gold |
Sequenced Size: | 403 |
Gene | Date | Evidence |
---|---|---|
CG9470 | 2002-11-11 | Blastp of sequenced clone |
MtnA | 2008-04-29 | Release 5.5 accounting |
MtnA | 2008-08-15 | Release 5.9 accounting |
MtnA | 2008-12-18 | 5.12 accounting |
403 bp (403 high quality bases) assembled on 2002-11-11
GenBank Submission: BT001431
> GH18460.complete TACAATGGTATGCGTAGAAGTGTTTGGCGTAAGCCTGCATGGAGCTGCCA TTGGTACAGATCAGTTGTGGTCAGCAGCAAAATCAAGTGAATCATCTCAG TGCAACTAAAGGCCTAAATAGCCCATACCTACCTTTTTTGTAAACAAGTG AACAAGTTCGAGGAAATACAACTCAATCAAGATGCCTTGCCCATGCGGAA GCGGATGCAAATGCGCCAGCCAGGCCACCAAGGGATCCTGCAACTGCGGA TCTGACTGCAAGTGCGGCGGCGACAAGAAATCCGCCTGCGGCTGCTCCGA GTGAGCTTTCCCCCAAAAAAGATCTGGAGTAGAGGCGCTGCATCTTGTCT CTCTACACACCCTGCAATAAATGTCCAATTAAAGTAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 5609614..5609796 | 385..203 | 915 | 100 | Minus |
chr3R | 27901430 | chr3R | 5610059..5610203 | 204..60 | 725 | 100 | Minus |
chrU | 10048995 | chrU | 8595959..8596020 | 1..62 | 310 | 100 | Plus |
chrU | 10048995 | chrU | 8839349..8839410 | 62..1 | 310 | 100 | Minus |
chrU | 10048995 | chrU | 8962331..8962392 | 62..1 | 310 | 100 | Minus |
chrU | 10048995 | chrU | 3651688..3651749 | 62..1 | 295 | 98.4 | Minus |
chrU | 10048995 | chrU | 6633979..6634040 | 1..62 | 295 | 98.4 | Plus |
chrU | 10048995 | chrU | 10047343..10047404 | 1..62 | 295 | 98.4 | Plus |
chrXHet | 204175 | chrXHet | 194937..194998 | 1..62 | 295 | 98.4 | Plus |
chrU | 10048995 | chrU | 9805333..9805394 | 1..62 | 265 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CR40766-RA | 838 | CR40766-RA | 112..173 | 1..62 | 310 | 100 | Plus |
CR41540-RA | 1279 | CR41540-RA | 817..878 | 1..62 | 310 | 100 | Plus |
CR40596-RA | 1001 | CR40596-RA | 450..511 | 1..62 | 295 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 9783776..9783960 | 387..203 | 925 | 100 | Minus |
3R | 32079331 | 3R | 9784223..9784367 | 204..60 | 725 | 100 | Minus |
rDNA | 76973 | rDNA | 48391..48452 | 1..62 | 310 | 100 | Plus |
rDNA | 76973 | rDNA | 72572..72633 | 1..62 | 310 | 100 | Plus |
XYmm | 216041 | XYmm | 165510..165571 | 1..62 | 310 | 100 | Plus |
Xmm | 1049845 | Xmm | 464574..464635 | 62..1 | 310 | 100 | Minus |
rDNA | 76973 | rDNA | 18552..18613 | 1..62 | 295 | 98.4 | Plus |
U | 3151297 | U | 2994278..2994339 | 1..62 | 295 | 98.4 | Plus |
X | 23542271 | X | 23216056..23216117 | 1..62 | 295 | 98.4 | Plus |
X | 23542271 | X | 23278357..23278418 | 62..1 | 295 | 98.4 | Minus |
X | 23542271 | X | 23441444..23441505 | 1..62 | 295 | 98.4 | Plus |
X | 23542271 | X | 23535973..23536034 | 62..1 | 295 | 98.4 | Minus |
U | 3151297 | U | 2481575..2481636 | 1..62 | 265 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 9524607..9524791 | 387..203 | 925 | 100 | Minus |
3R | 31820162 | 3R | 9525054..9525198 | 204..60 | 725 | 100 | Minus |
X | 23527363 | X | 23426536..23426597 | 1..62 | 295 | 98.3 | Plus |
X | 23527363 | X | 23201148..23201209 | 1..62 | 295 | 98.3 | Plus |
X | 23527363 | X | 23521065..23521126 | 62..1 | 295 | 98.3 | Minus |
X | 23527363 | X | 23263449..23263510 | 62..1 | 295 | 98.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5609614..5609795 | 204..385 | 100 | <- | Minus |
chr3R | 5610060..5610207 | 54..203 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MtnA-RA | 1..123 | 182..304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MtnA-RA | 1..123 | 182..304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MtnA-RA | 1..123 | 182..304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MtnA-RA | 1..123 | 182..304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MtnA-RA | 1..123 | 182..304 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CR41540-RA | 817..895 | 1..81 | 93 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MtnA-RA | 3..330 | 59..385 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MtnA-RA | 3..330 | 59..385 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MtnA-RA | 2..329 | 59..385 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MtnA-RA | 3..330 | 59..385 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MtnA-RA | 2..329 | 59..385 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9783778..9783959 | 204..385 | 100 | <- | Minus |
3R | 9784224..9784371 | 54..203 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9783778..9783959 | 204..385 | 100 | <- | Minus |
3R | 9784224..9784371 | 54..203 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9783778..9783959 | 204..385 | 100 | <- | Minus |
3R | 9784224..9784371 | 54..203 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5609500..5609681 | 204..385 | 100 | <- | Minus |
arm_3R | 5609946..5610093 | 54..203 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9524609..9524790 | 204..385 | 100 | <- | Minus |
3R | 9525055..9525202 | 54..203 | 98 | Minus |
Translation from 181 to 303
> GH18460.hyp MPCPCGSGCKCASQATKGSCNCGSDCKCGGDKKSACGCSE*
Translation from 181 to 303
> GH18460.pep MPCPCGSGCKCASQATKGSCNCGSDCKCGGDKKSACGCSE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\MtnA-PA | 40 | GF17152-PA | 1..40 | 1..40 | 172 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\MtnA-PA | 40 | GG17325-PA | 1..40 | 1..40 | 171 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MtnA-PB | 40 | CG9470-PB | 1..40 | 1..40 | 245 | 100 | Plus |
MtnA-PA | 40 | CG9470-PA | 1..40 | 1..40 | 245 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24880-PA | 40 | GI24880-PA | 1..40 | 1..40 | 151 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23229-PA | 40 | GL23229-PA | 1..40 | 1..40 | 149 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\MtnA-PA | 40 | GA21812-PA | 1..40 | 1..40 | 149 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\MtnA-PA | 40 | GM26211-PA | 1..40 | 1..40 | 169 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\MtnA-PA | 40 | GD20757-PA | 1..40 | 1..40 | 175 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\MtnA-PA | 41 | GJ24522-PA | 1..39 | 1..39 | 153 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11122-PA | 41 | GK11122-PA | 1..39 | 1..39 | 154 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\MtnA-PA | 40 | GE24728-PA | 1..40 | 1..40 | 170 | 92.5 | Plus |