GH18521.complete Sequence
954 bp (954 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122118
> GH18521.complete
CCCCATTACACATTTATCACTAAACATTCAAAGAATTTTCCAAACTTTTA
CTCTGTTTTAAACACGATGACGTCCATGCTGAATACCCCGATAGTCTCCA
TCTTCGATTTGATGGTGGAACGTCACATCAGGCTGCGCAGGGAACTGAAT
GGAAATCTTCCGCCAGTTCGTCGGCCTAAAGCAGCACGTGGAGCTGCCGA
CGGAAAGAAACCTTTCAAATACAAACCAAGTCCGATGGAGTTTCCCTTGC
CAGAAACACTGGAATTGATGTCTCCGCCAGCGGCAAATGCCATTACTGCC
GCGCATTTGACCCAGAAACACACTTTCCTTAAGATCCAGCCACCGAGCGA
GAAGAACGCAATTAAGAAGCTGGTGGAGAAGATGTCCCATGGACGAGGCA
AGACCAAGACCGTGTCGCCAAGGCACTCCCTGTCCAGCAAGAAGACCAGT
GCCAATTCCTCCAAGACGGTCGTCATTCAGCCTCGCAAAAGGAAAGTAGC
CGGGCAGGGATCATTCCGTGCTCAGCCAAAGCTCGGCAAGACCAGTTCCA
CTCAGTTGAAGCGACAACCCCTCTCTCCCAGAAGGGCAGAATCTACAGCT
AAGGATGCCAGTACGCTGAGCAAGACGAAGACCAAGAAGAGTTCGCCTGA
AAAGTCGGGTGCACAGATGCGAAATACCAGGTCTGCAGATCGACTCGGCA
ATGCAGAGATTCCGGTCTCAAAACGATGGCGTCTTTAGAAGCGATAGATA
TACCAGTAGATTTTCATTCATTCAAGCTAATCAAATTTGCACCAAGTAAT
CAACAACTTTAATCACAGTGATCCCTCCATGTGATGGACCGCACTGAATC
CCACATGAAGGCGATCCAAATTGAAAATGTACTTAAATATGGATTGTCTA
GTTTATATACACATGAATAAAAATGTCATGAAATGAAAAAAAAAAAAAAA
AAAA
GH18521.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:48:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8838-RA | 935 | CG8838-RA | 1..935 | 1..935 | 4675 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:22:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 3357317..3358251 | 1..935 | 4585 | 99.4 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:58:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:22:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3357684..3358625 | 1..942 | 4695 | 99.9 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:21:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3357684..3358625 | 1..942 | 4695 | 99.8 | Plus |
Blast to na_te.dros performed on 2019-03-15 19:22:54 has no hits.
GH18521.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:23:47 Download gff for
GH18521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 3357317..3358251 | 1..935 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:48:08 Download gff for
GH18521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8838-RA | 1..672 | 67..738 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:23:27 Download gff for
GH18521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8838-RA | 1..672 | 67..738 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:48:56 Download gff for
GH18521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8838-RA | 1..672 | 67..738 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:14:08 Download gff for
GH18521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8838-RA | 1..672 | 67..738 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:16:03 Download gff for
GH18521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8838-RA | 1..672 | 67..738 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:50:33 Download gff for
GH18521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8838-RA | 1..935 | 1..935 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:23:26 Download gff for
GH18521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8838-RA | 1..935 | 1..935 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:48:56 Download gff for
GH18521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8838-RA | 39..973 | 1..935 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:14:09 Download gff for
GH18521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8838-RA | 1..935 | 1..935 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:16:03 Download gff for
GH18521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8838-RA | 39..973 | 1..935 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:23:47 Download gff for
GH18521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3357684..3358618 | 1..935 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:23:47 Download gff for
GH18521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3357684..3358618 | 1..935 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:23:47 Download gff for
GH18521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3357684..3358618 | 1..935 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:48:56 Download gff for
GH18521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3357684..3358618 | 1..935 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:47:03 Download gff for
GH18521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3357684..3358618 | 1..935 | 100 | | Plus |
GH18521.hyp Sequence
Translation from 0 to 737
> GH18521.hyp
PHYTFITKHSKNFPNFYSVLNTMTSMLNTPIVSIFDLMVERHIRLRRELN
GNLPPVRRPKAARGAADGKKPFKYKPSPMEFPLPETLELMSPPAANAITA
AHLTQKHTFLKIQPPSEKNAIKKLVEKMSHGRGKTKTVSPRHSLSSKKTS
ANSSKTVVIQPRKRKVAGQGSFRAQPKLGKTSSTQLKRQPLSPRRAESTA
KDASTLSKTKTKKSSPEKSGAQMRNTRSADRLGNAEIPVSKRWRL*
GH18521.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 09:58:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8838-PA | 223 | CG8838-PA | 1..223 | 23..245 | 1126 | 100 | Plus |
GH18521.pep Sequence
Translation from 66 to 737
> GH18521.pep
MTSMLNTPIVSIFDLMVERHIRLRRELNGNLPPVRRPKAARGAADGKKPF
KYKPSPMEFPLPETLELMSPPAANAITAAHLTQKHTFLKIQPPSEKNAIK
KLVEKMSHGRGKTKTVSPRHSLSSKKTSANSSKTVVIQPRKRKVAGQGSF
RAQPKLGKTSSTQLKRQPLSPRRAESTAKDASTLSKTKTKKSSPEKSGAQ
MRNTRSADRLGNAEIPVSKRWRL*
GH18521.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:28:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF14181-PA | 234 | GF14181-PA | 1..234 | 1..223 | 188 | 33.3 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:28:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG24935-PA | 222 | GG24935-PA | 1..222 | 1..223 | 666 | 67.7 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8838-PA | 223 | CG8838-PA | 1..223 | 1..223 | 1126 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:28:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM18412-PA | 226 | GM18412-PA | 1..226 | 1..223 | 816 | 82.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:28:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD23224-PA | 229 | GD23224-PA | 1..229 | 1..223 | 820 | 82.1 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:28:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE18227-PA | 228 | GE18227-PA | 1..228 | 1..223 | 761 | 75.1 | Plus |