BDGP Sequence Production Resources |
Search the DGRC for GH18603
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 186 |
Well: | 3 |
Vector: | pOT2 |
Associated Gene/Transcript | Ufd1-like-RA |
Protein status: | GH18603.pep: gold |
Preliminary Size: | 1317 |
Sequenced Size: | 1204 |
Gene | Date | Evidence |
---|---|---|
CG6233 | 2001-01-01 | Release 2 assignment |
CG6233 | 2001-10-10 | Blastp of sequenced clone |
CG6233 | 2003-01-01 | Sim4 clustering to Release 3 |
Ufd1-like | 2008-04-29 | Release 5.5 accounting |
Ufd1-like | 2008-08-15 | Release 5.9 accounting |
Ufd1-like | 2008-12-18 | 5.12 accounting |
1204 bp (1204 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060735
> GH18603.complete TGGTCACACTGCCCCCGCCGTGACAAACAAAATAGAAAAAAAAAATAAAA CAAAAGATAAAATTTTAGCCTCCCCCCTTTGAGAAATAAAGGGTCATTTG AGGCAGTTTAAATCGAAAAGAATCCATAGGCACGGAGAGCCCAGCACACA TAGAATGTTCCACTTCAGCGGCTTCAACATGATGTTCCCGGAGGGACGCA ATTTTCATGCCAACTACAAGTGCTTCTCCGTATCCATGTTGCCAGGAAAC GAGCGAACCGACGTGGAAAAGGGCGGAAAGATTATTATGCCTCCCTCGGC GCTGGACACGCTCACCCGCCTGAATGTCGAGTATCCAATGCTGTTCAAGC TGACCAACGTCAAGAAATCGCGATCCTCGCATGCCGGCGTACTCGAGTTT GTGGCCGACGAGGGCAAATGCTATCTACCCCACTGGATGATGGAAAACCT GCTGTTGGGTGAGGGCGACATACTCAACATCGAGAGTGTCTCGCTGCCGG TGGCCACCTTCTCAAAGTTTCAACCGCACAGCACCGACTTCCTGGACATC ACCAATCCCAAGGCGGTGCTGGAGAATGCATTGCGCAACTTTGCCTGCCT CACCAGGGGCGATGTCATAGCCATTAAGTACAACAAGAAGGTCTACGAAC TGTGTGTCCTGGAGACAAAGCCCGGCAATGCAGTCAGCATCATTGAGTGC GACATGAATGTGGAATTTGAGGCGCCAGTCGGCTACAAGGATCACTCCGA AACGCAGGCATCGGGCTCTGGGCAGCAGGGTGCTGCTGGAACTGTTGGCG GCGAAATCGCTGGAGCCACCAACGCCATACTCGAAGAGGTCGTGGAGACC TTCAAGGGTTCCGGCGTACGTCTCGATGGTAAGAAGAAGAAGGAAAGCCA GTTGGAAACGCCGGTCGTTAAGAAGGTGCTAGCCCGCGGCGTTCCAGACT ATGATTTCCAGTTTGGACTCATCCGTTTCGATCGCAACATTCGGCCTATC AGTGATAGAAGCCAAGAAGATGATGCCGTAGCTGGCAATGCGGACGCTTC CGATGCGGAGAGCTTCCACGGCACCGGTTTCTCGATGAAGAAAACGCGCA AATAGCTCTGTATCTCTAGTTCTAGTTATATATTGTGTGACACATAGAAA TTAAAGGAAAAACCTCACAGGGGCAGCGTCAAAAAAAAAAAAAAAAAAAA AAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11112844..11113742 | 282..1180 | 99 | <- | Minus |
chr3L | 11113800..11114078 | 1..281 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ufd1-like-RA | 1..951 | 155..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ufd1-like-RA | 1..951 | 155..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ufd1-like-RA | 1..951 | 155..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ufd1-like-RA | 1..951 | 155..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ufd1-like-RA | 1..951 | 155..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ufd1-like-RA | 1..1179 | 1..1180 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ufd1-like-RA | 1..1179 | 1..1180 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ufd1-like-RA | 16..1194 | 1..1180 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ufd1-like-RA | 1..1179 | 1..1180 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ufd1-like-RA | 16..1194 | 1..1180 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11121966..11122864 | 282..1180 | 100 | <- | Minus |
3L | 11122922..11123201 | 1..281 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11121966..11122864 | 282..1180 | 100 | <- | Minus |
3L | 11122922..11123201 | 1..281 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11121966..11122864 | 282..1180 | 100 | <- | Minus |
3L | 11122922..11123201 | 1..281 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11115066..11115964 | 282..1180 | 100 | <- | Minus |
arm_3L | 11116022..11116301 | 1..281 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11115066..11115964 | 282..1180 | 100 | <- | Minus |
3L | 11116022..11116301 | 1..281 | 99 | Minus |
Translation from 154 to 1104
> GH18603.pep MFHFSGFNMMFPEGRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSAL DTLTRLNVEYPMLFKLTNVKKSRSSHAGVLEFVADEGKCYLPHWMMENLL LGEGDILNIESVSLPVATFSKFQPHSTDFLDITNPKAVLENALRNFACLT RGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYKDHSET QASGSGQQGAAGTVGGEIAGATNAILEEVVETFKGSGVRLDGKKKKESQL ETPVVKKVLARGVPDYDFQFGLIRFDRNIRPISDRSQEDDAVAGNADASD AESFHGTGFSMKKTRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24568-PA | 317 | GF24568-PA | 1..317 | 1..316 | 1408 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13934-PA | 314 | GG13934-PA | 1..314 | 1..316 | 1557 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14636-PA | 334 | GH14636-PA | 1..334 | 1..316 | 1340 | 79.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ufd1-like-PA | 316 | CG6233-PA | 1..316 | 1..316 | 1643 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11622-PA | 314 | GI11622-PA | 1..314 | 1..316 | 1384 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19461-PA | 313 | GA19461-PA | 1..313 | 1..316 | 1404 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24769-PA | 316 | GM24769-PA | 1..316 | 1..316 | 1649 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12819-PA | 316 | GD12819-PA | 1..316 | 1..316 | 1662 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11302-PA | 314 | GJ11302-PA | 1..314 | 1..316 | 1361 | 82.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20554-PA | 325 | GK20554-PA | 1..325 | 1..316 | 1333 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20233-PA | 316 | GE20233-PA | 1..316 | 1..316 | 1495 | 94.9 | Plus |
Translation from 154 to 1104
> GH18603.hyp MFHFSGFNMMFPEGRNFHANYKCFSVSMLPGNERTDVEKGGKIIMPPSAL DTLTRLNVEYPMLFKLTNVKKSRSSHAGVLEFVADEGKCYLPHWMMENLL LGEGDILNIESVSLPVATFSKFQPHSTDFLDITNPKAVLENALRNFACLT RGDVIAIKYNKKVYELCVLETKPGNAVSIIECDMNVEFEAPVGYKDHSET QASGSGQQGAAGTVGGEIAGATNAILEEVVETFKGSGVRLDGKKKKESQL ETPVVKKVLARGVPDYDFQFGLIRFDRNIRPISDRSQEDDAVAGNADASD AESFHGTGFSMKKTRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ufd1-like-PA | 316 | CG6233-PA | 1..316 | 1..316 | 1643 | 100 | Plus |