BDGP Sequence Production Resources |
Search the DGRC for GH18625
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 186 |
Well: | 25 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3342-RA |
Protein status: | GH18625.pep: gold |
Preliminary Size: | 1709 |
Sequenced Size: | 1679 |
Gene | Date | Evidence |
---|---|---|
CG3342 | 2001-01-01 | Release 2 assignment |
CG3342 | 2001-09-19 | Blastp of sequenced clone |
CG3342 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3342 | 2008-04-29 | Release 5.5 accounting |
CG3342 | 2008-08-15 | Release 5.9 accounting |
CG3342 | 2008-12-18 | 5.12 accounting |
1679 bp (1679 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058411
> GH18625.complete TTTTTAAACATTTTCGATGCGACTGCATAATTAGGCATGGAAATCGGCAA CGATCAGTCCTATCAGGACTTCTTCGACAAGTTGCGAAGTGAATCGGGTC CTCGCAACTTGCGCCAGATCTTTGAGGACGACGATCGTCCGCTGGCGAAC GAATCATCCAGCTTGCGCTATCAGCCAGGCAGCTCCAAAAAATTGCAGGC TGGCAAAAGACCGGCCATGACCAGGAGTAGCACCCAGGAGACGGGTGATT CACCGCCTGCCGCCTGGAACACGGCCATTGCCAAGGTGGTGCATGCCTAT CGGAGCAGCGAGAACGTTGGACGCGTCGGCCTGGCCCTCTCGATTCTGGG CGAGATGGAGGCCAGCAAGCTGATTGTCTACCGCAGCAAGAGTCAGGTGC TGACCACGCTGCAGTTGACACCGCGTGGCGGCAAGGTGATACTGCGCGAA TCCTATCTGCAGTTCTACGATGACGAGCAGCGCTTCTGGAGCCTGCGATT CGACAAGGAACCGGATGAGAAGGAATTCATAACGTTTATGGTCAAAAACA AACTGCCAGTGGAGCACTATCTCAGCGAGATCTCATCCTCCAGCTCGGCA TCGCCTTCGCGTGAGGATTTATCTAAGATCCGAACTAAAGCAACGGTCAC AAAGACGACGCCTAATCCGCCACAGCCGCAACCACGTTCCCGCGTAACGC TGCCAACGCTGGAGAAGGCGGACGATGAGGAACGCGAACGGGAAACAGAG ACACCTTCCAATGAGGATGTGATAGTAACGCCAGTGCCGCGACCCATAGG TTCGTCAAATGCTCACAGGAAACTCAGTGCCAGTTCCCTGGCGGTGGCCA ACGCTTCAACGAGCAGCGATACTCCGTTGGCTGTGACGACACTGGACAAA TATCTAGACGAACAGCGTGCCTCGGGTGCGTTAATGGAGCACAAGATGGA CGCCATTCTGCAGGCCATGAATCGCATGGGCGGCCAGTCGAGTGTTGCGC CCAAGAAGCCCAGTGATCCGCTGCTGGAACGCGACAGCGAGGACGAGATG CTGGAGCTGGAGCAGAAGCTGCTCAACTTGAAGCGGGAGAATCGAGCGCT AATGCGCAACCTCAAGGCACGCGAACAGGCGCTGGAGGATCTACGCTGCT CGGCGTGCGCCCTTTGCGAGGAGCTACTAGTCCAGAATGGCGAGCTCAAG TCGCAGAATGCCCAGCTGTTGTTAGCCAGCCAGCATATTTCCGATTCAAG CACAGCTGCTTCGCCTGCCCATTGCCGCAATTGCGAGTCGTCTTCCCGGC AAATAGCCAAAATGCAGCTACACATTTCCGCACTGCAGGAAGCGCTGCGA ATCTTTCAGAAATCAGGCGACTCCAGCTCCAGTTCGGGTCGGTTATAGCA CCTAACGTAGGCGTATTATATATGTTCGGTATTACTATCGAAAAGTGTAT TAAATCATTTGTTAGGTCGCGTAACATATCCACAAATACAAGCCAGACAC TATTAGCTATCTTTAAGTCATTAGATTGCCATGTTATTGGGCTCATTTAC AAAGCGATTTTCTAATCTATTACAACTATTATTACTAAATGTGAGATATA AAATATGTTGCGGAAGATTATAATTAATAGCAACCCATGCTTTGCTCTCT CTCAATTATGAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6420007..6420095 | 1..89 | 100 | Minus | |
chrX | 6418362..6419932 | 90..1660 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3342-RA | 1..1362 | 37..1398 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3342-RA | 1..1362 | 37..1398 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3342-RA | 1..1362 | 37..1398 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3342-RA | 1..1362 | 37..1398 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3342-RA | 1..1362 | 37..1398 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3342-RA | 23..1682 | 1..1660 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3342-RA | 23..1682 | 1..1660 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3342-RA | 50..1709 | 1..1660 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3342-RA | 23..1682 | 1..1660 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3342-RA | 50..1709 | 1..1660 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6526106..6527676 | 90..1660 | 100 | <- | Minus |
X | 6527751..6527839 | 1..89 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6526106..6527676 | 90..1660 | 100 | <- | Minus |
X | 6527751..6527839 | 1..89 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6526106..6527676 | 90..1660 | 100 | <- | Minus |
X | 6527751..6527839 | 1..89 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6420139..6421709 | 90..1660 | 100 | <- | Minus |
arm_X | 6421784..6421872 | 1..89 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6534204..6535774 | 90..1660 | 100 | <- | Minus |
X | 6535849..6535937 | 1..89 | 100 | Minus |
Translation from 36 to 1397
> GH18625.hyp MEIGNDQSYQDFFDKLRSESGPRNLRQIFEDDDRPLANESSSLRYQPGSS KKLQAGKRPAMTRSSTQETGDSPPAAWNTAIAKVVHAYRSSENVGRVGLA LSILGEMEASKLIVYRSKSQVLTTLQLTPRGGKVILRESYLQFYDDEQRF WSLRFDKEPDEKEFITFMVKNKLPVEHYLSEISSSSSASPSREDLSKIRT KATVTKTTPNPPQPQPRSRVTLPTLEKADDEERERETETPSNEDVIVTPV PRPIGSSNAHRKLSASSLAVANASTSSDTPLAVTTLDKYLDEQRASGALM EHKMDAILQAMNRMGGQSSVAPKKPSDPLLERDSEDEMLELEQKLLNLKR ENRALMRNLKAREQALEDLRCSACALCEELLVQNGELKSQNAQLLLASQH ISDSSTAASPAHCRNCESSSRQIAKMQLHISALQEALRIFQKSGDSSSSS GRL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3342-PA | 453 | CG3342-PA | 1..453 | 1..453 | 2272 | 100 | Plus |
Translation from 36 to 1397
> GH18625.pep MEIGNDQSYQDFFDKLRSESGPRNLRQIFEDDDRPLANESSSLRYQPGSS KKLQAGKRPAMTRSSTQETGDSPPAAWNTAIAKVVHAYRSSENVGRVGLA LSILGEMEASKLIVYRSKSQVLTTLQLTPRGGKVILRESYLQFYDDEQRF WSLRFDKEPDEKEFITFMVKNKLPVEHYLSEISSSSSASPSREDLSKIRT KATVTKTTPNPPQPQPRSRVTLPTLEKADDEERERETETPSNEDVIVTPV PRPIGSSNAHRKLSASSLAVANASTSSDTPLAVTTLDKYLDEQRASGALM EHKMDAILQAMNRMGGQSSVAPKKPSDPLLERDSEDEMLELEQKLLNLKR ENRALMRNLKAREQALEDLRCSACALCEELLVQNGELKSQNAQLLLASQH ISDSSTAASPAHCRNCESSSRQIAKMQLHISALQEALRIFQKSGDSSSSS GRL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21902-PA | 327 | GF21902-PA | 8..183 | 11..192 | 193 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17671-PA | 449 | GG17671-PA | 1..449 | 1..453 | 1933 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12631-PA | 472 | GH12631-PA | 7..469 | 8..449 | 539 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3342-PA | 453 | CG3342-PA | 1..453 | 1..453 | 2272 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21468-PA | 547 | GI21468-PA | 1..519 | 1..444 | 680 | 37.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14314-PA | 435 | GL14314-PA | 1..431 | 1..437 | 716 | 42.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17391-PA | 435 | GA17391-PA | 1..431 | 1..437 | 717 | 42.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12570-PA | 440 | GM12570-PA | 1..440 | 1..453 | 1981 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16488-PA | 494 | GJ16488-PA | 1..476 | 1..444 | 738 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19723-PA | 485 | GK19723-PA | 1..476 | 1..437 | 732 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16461-PA | 452 | GE16461-PA | 1..452 | 1..453 | 1759 | 80.7 | Plus |