BDGP Sequence Production Resources |
Search the DGRC for GH18717
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 187 |
Well: | 17 |
Vector: | pOT2 |
Associated Gene/Transcript | Mlh1-RA |
Protein status: | GH18717.pep: validated not full length |
Preliminary Size: | 2133 |
Sequenced Size: | 2068 |
Gene | Date | Evidence |
---|---|---|
CG11482 | 2001-01-01 | Release 2 assignment |
CG11482 | 2001-11-08 | Blastp of sequenced clone |
Mlh1 | 2008-04-29 | Release 5.5 accounting |
Mlh1 | 2008-08-15 | Release 5.9 accounting |
Mlh1 | 2008-12-18 | 5.12 accounting |
2068 bp (2068 high quality bases) assembled on 2001-11-08
GenBank Submission: AY069160
> GH18717.complete GAATATTTGCAGCCTGGAGTCATCCGGAAGCTGGACGAGGTGGTGGTGAA CCGCATAGCCGCCGGCGAGATTATTCAGCGACCCGCCAACGCCCTAAAAG AGCTGCTCGAGAACAGTTTGGACGCCCAATCGACCCACATCCAGGTGCAG GTGAAGGCCGGTGGGCTGAAGCTGCTTCAAATCCAGGACAATGGCACGGG GATACGACGCGAGGATCTGGCCATCGTCTGCGAGCGGTTCACCACCTCCA AGCTGACCCGCTTCGAGGATTTGTCCCAGATAGCAACATTTGGCTTCAGA GGAGAGGCCTTGGCCAGCATTAGTCATGTGGCGCACCTAAGCATCCAGAC CAAGACGGCTAAGGAGAAGTGCGGCTACAAGGCCACCTACGCGGATGGCA AGCTCCAGGGTCAGCCGAAGCCGTGTGCCGGAAACCAAGGCACGATCATT TGCATAGAGGATCTGTTCTACAACATGCCGCAAAGGAGGCAGGCACTCCG TTCGCCGGCCGAGGAGTTCCAGAGATTGTCCGAGGTTCTGGCTAGGTACG CTGTCCACAATCCAAGGGTGGGCTTCACTCTCCGCAAGCAGGGAGACGCG CAACCTGCCCTGCGGACACCAGTGGCCAGTTCCCGATCCGAAAACATCCG CATCATTTACGGGGCAGCAATTTCCAAGGAGCTGCTGGAGTTTAGCCACC GCGATGAGGTTTACAAGTTCGAGGCCGAGTGTCTGATCACTCAGGTTAAC TATTCGGCCAAAAAGTGTCAGATGCTGCTGTTCATCAACCAGCGACTGGT GGAGTCCACAGCTCTCAGGACCTCCGTGGACTCGATTTATGCCACATACC TGCCCCGTGGCCACCATCCTTTCGTATATATGAGCCTGACGCTGCCGCCA CAGAACTTGGACGTGAATGTCCATCCCACCAAGCATGAGGTGCACTTTCT CTACCAGGAAGAGATTGTGGATAGCATTAAGCAGCAGGTTGAAGCCCGAC TCCTAGGCAGCAATGCCACGAGGACGTTCTACAAACAGCTAAGGCTACCA GGAGCCCCCGACCTGGATGAAACCCAGTTGGCTGATAAAACGCAACGCAT TTATCCCAAGGAGATGGTGCGTACTGACTCCACAGAGCAAAAGCTGGATA AGTTTTTGGCGCCTCTGGTCAAAAGTGACTCAGGCGTATCCTCCAGTTCC TCCCAGGAAGCGTCTCGTCTGCCAGAAGAGAGTTTTCGCGTTACAGCGGC AAAAAAATCACGAGAAGTGCGTTTGAGCAGCGTGCTAGACATGAGGAAGC GCGTGGAGCGGCAGTGCAGCGTTCAGCTGAGGAGCACGCTCAAAAACTTG GTCTATGTGGGCTGTGTGGATGAGAGGCGAGCCCTGTTCCAGCATGAAAC GCGCCTTTATATGTGCAACACACGGTCGTTTAGTGAGGAACTGTTCTATC AGCGGATGATTTACGAGTTTCAAAACTGCTCGGAAATCACAATAAGTCCG CCATTGCCTCTCAAGGAGCTGCTAATCTTGTCGCTGGAAAGCGAAGCCGC CGGCTGGACGCCCGAAGACGGGGATAAGGCTGAGCTGGCGGACGGTGCTG CGGACATTCTTCTGAAAAAGGCGCCCATCATGAGAGAGTATTTCGGGCTG CGCATCTCGGAGGATGGAATGCTCGAATCTCTGCCCAGTTTGCTGCACCA GCATCGACCTTGTGTGGCCCACCTGCCTGTTTACCTGCTCCGCTTGGCCA CCGAAGTGGACTGGGAGCAGGAGACACGATGCTTCGAGACATTCTGTAGG GAAACTGCTCGATTTTACGCGCAATTGGATTGGCGGGAAGGTGCGACTGC GGGCTTTTCCAGATGGACAATGGAACACGTTCTATTTCCTGCCTTTAAAA AATATCTTCTGCCACCACCACGCATCAAGGATCAGATCTACGAGCTCACT AACCTGCCCACTCTGTACAAGGTGTTCGAGCGGTGCTAGTTTAGGTTGTT CACTTCCAGAACTTTAAATATTGATTATATTTGGTATTCTAAACATAAAA AAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4057833..4058643 | 1..811 | 99 | -> | Plus |
chr2R | 4058701..4059935 | 812..2046 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mlh1-RA | 7..1995 | 1..1989 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mlh1-RA | 7..1995 | 1..1989 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mlh1-RA | 7..1995 | 1..1989 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mlh1-RA | 7..1995 | 1..1989 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mlh1-RA | 7..1995 | 1..1989 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mlh1-RA | 264..2309 | 1..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mlh1-RA | 264..2309 | 1..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mlh1-RA | 26..2071 | 1..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mlh1-RA | 264..2309 | 1..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Mlh1-RA | 26..2071 | 1..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8170299..8171109 | 1..811 | 100 | -> | Plus |
2R | 8171167..8172401 | 812..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8170299..8171109 | 1..811 | 100 | -> | Plus |
2R | 8171167..8172401 | 812..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8170299..8171109 | 1..811 | 100 | -> | Plus |
2R | 8171167..8172401 | 812..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4057804..4058614 | 1..811 | 100 | -> | Plus |
arm_2R | 4058672..4059906 | 812..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8171498..8172308 | 1..811 | 100 | -> | Plus |
2R | 8172366..8173600 | 812..2046 | 100 | Plus |
Translation from 0 to 1988
> GH18717.pep EYLQPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQ VKAGGLKLLQIQDNGTGIRREDLAIVCERFTTSKLTRFEDLSQIATFGFR GEALASISHVAHLSIQTKTAKEKCGYKATYADGKLQGQPKPCAGNQGTII CIEDLFYNMPQRRQALRSPAEEFQRLSEVLARYAVHNPRVGFTLRKQGDA QPALRTPVASSRSENIRIIYGAAISKELLEFSHRDEVYKFEAECLITQVN YSAKKCQMLLFINQRLVESTALRTSVDSIYATYLPRGHHPFVYMSLTLPP QNLDVNVHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTFYKQLRLP GAPDLDETQLADKTQRIYPKEMVRTDSTEQKLDKFLAPLVKSDSGVSSSS SQEASRLPEESFRVTAAKKSREVRLSSVLDMRKRVERQCSVQLRSTLKNL VYVGCVDERRALFQHETRLYMCNTRSFSEELFYQRMIYEFQNCSEITISP PLPLKELLILSLESEAAGWTPEDGDKAELADGAADILLKKAPIMREYFGL RISEDGMLESLPSLLHQHRPCVAHLPVYLLRLATEVDWEQETRCFETFCR ETARFYAQLDWREGATAGFSRWTMEHVLFPAFKKYLLPPPRIKDQIYELT NLPTLYKVFERC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13669-PA | 663 | GF13669-PA | 4..663 | 3..662 | 2973 | 82.9 | Plus |
Dana\GF11871-PA | 919 | GF11871-PA | 24..374 | 6..314 | 341 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23342-PA | 664 | GG23342-PA | 3..664 | 1..662 | 3302 | 93.4 | Plus |
Dere\GG22356-PA | 888 | GG22356-PA | 25..375 | 6..314 | 317 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21079-PA | 662 | GH21079-PA | 4..662 | 4..662 | 2610 | 73.9 | Plus |
Dgri\GH21651-PA | 903 | GH21651-PA | 19..369 | 6..314 | 339 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mlh1-PA | 664 | CG11482-PA | 3..664 | 1..662 | 3403 | 100 | Plus |
Mlh1-PB | 663 | CG11482-PB | 3..663 | 1..662 | 3382 | 99.7 | Plus |
Pms2-PA | 899 | CG8169-PA | 25..436 | 6..380 | 314 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18680-PA | 659 | GI18680-PA | 2..659 | 3..662 | 2703 | 75.3 | Plus |
Dmoj\GI20104-PA | 380 | GI20104-PA | 19..377 | 6..323 | 334 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11208-PA | 675 | GL11208-PA | 5..675 | 3..662 | 2875 | 77.8 | Plus |
Dper\GL20044-PA | 645 | GL20044-PA | 19..376 | 6..322 | 337 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11026-PA | 675 | GA11026-PA | 5..675 | 3..662 | 2875 | 77.8 | Plus |
Dpse\GA20862-PA | 881 | GA20862-PA | 19..376 | 6..322 | 338 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21014-PA | 664 | GM21014-PA | 5..664 | 3..662 | 3465 | 97.4 | Plus |
Dsec\GM20141-PA | 901 | GM20141-PA | 25..375 | 6..314 | 329 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10548-PA | 664 | GD10548-PA | 5..664 | 3..662 | 3451 | 96.7 | Plus |
Dsim\GD25619-PA | 713 | GD25619-PA | 25..375 | 6..314 | 333 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21695-PA | 660 | GJ21695-PA | 1..660 | 3..662 | 2626 | 74.9 | Plus |
Dvir\GJ19872-PA | 886 | GJ19872-PA | 17..376 | 4..322 | 333 | 27.8 | Plus |
Translation from 0 to 1988
> GH18717.hyp EYLQPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQ VKAGGLKLLQIQDNGTGIRREDLAIVCERFTTSKLTRFEDLSQIATFGFR GEALASISHVAHLSIQTKTAKEKCGYKATYADGKLQGQPKPCAGNQGTII CIEDLFYNMPQRRQALRSPAEEFQRLSEVLARYAVHNPRVGFTLRKQGDA QPALRTPVASSRSENIRIIYGAAISKELLEFSHRDEVYKFEAECLITQVN YSAKKCQMLLFINQRLVESTALRTSVDSIYATYLPRGHHPFVYMSLTLPP QNLDVNVHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTFYKQLRLP GAPDLDETQLADKTQRIYPKEMVRTDSTEQKLDKFLAPLVKSDSGVSSSS SQEASRLPEESFRVTAAKKSREVRLSSVLDMRKRVERQCSVQLRSTLKNL VYVGCVDERRALFQHETRLYMCNTRSFSEELFYQRMIYEFQNCSEITISP PLPLKELLILSLESEAAGWTPEDGDKAELADGAADILLKKAPIMREYFGL RISEDGMLESLPSLLHQHRPCVAHLPVYLLRLATEVDWEQETRCFETFCR ETARFYAQLDWREGATAGFSRWTMEHVLFPAFKKYLLPPPRIKDQIYELT NLPTLYKVFERC*