BDGP Sequence Production Resources |
Search the DGRC for GH18902
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 189 |
Well: | 2 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4951-RA |
Protein status: | GH18902.pep: gold |
Preliminary Size: | 1243 |
Sequenced Size: | 1062 |
Gene | Date | Evidence |
---|---|---|
CG4951 | 2001-01-01 | Release 2 assignment |
CG4951 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4951 | 2003-01-15 | Blastp of sequenced clone |
CG4951 | 2008-04-29 | Release 5.5 accounting |
CG4951 | 2008-08-15 | Release 5.9 accounting |
CG4951 | 2008-12-18 | 5.12 accounting |
1062 bp (1062 high quality bases) assembled on 2003-01-15
GenBank Submission: AY060739
> GH18902.complete CTACGGTCACATCAGGACGCATAGCAATTTTATAAAAATGTCATTTTCCG CCATCGGTGATTGCCAACTAATTTCGCAATTATACCAGTACAAGAAGCAC CGCGTCATCTGCAGCGTCAAAGTTCTGCCGACACCTGTGACCCATTTTGA GCGGGAATCCAAGAATGATTTCCATTGGATGACCGCGGATCGGTGGAGCC GGATTGAGTGTGGTCTATGGCGCCTGTTCGAGAACCTGAAGCAGTGGCAG GATGCCTACCAACTGGACACCGAGCTCATTATCGATCACATCATCGTGCG CGTCCAGGCGACCAATAAGTCGCATCCTGCAACGGTCGCTCTTCTGGCCG GTACGGAGTCCAGCTCCAAGGATCTCTGCCTGGACCTACAGCTGCAGTAC ATAACACAAGAGGACACCACCATTGTGGACGTCATTCCCGCCAAGCGCGA GCTTGCCACGGAAGCAGAAACAAATGGCACCAGACCCACATCCCGCAAGA TCCGCGTAGCAAACTCAGGATCCAAGCCAAAAGCGGGCACACAATCGAAG CCCAAGCACATTGACGCCGACAACGAGGATGACAAGAGCTCCACCACGGC CAGCCAACCAACCAAGATCAAGAGCGAGCGCAGGTCCATTTCCCAAGGAG GCGAAAAGGATAAGGCTTCTTCCAGCAGCCCCAGTTCCTCGCAGCAGAGC AACCGCATTAAGCGATCGCACAGTCCATCACAGCAGAATTCCAGATCCAG CTCCGTTGAGGCCAAGCCTGCACGCCGCTCCGGCCGATCGCCCATACGCC CGAGTCGATTCAAAAACTTCGTAGTTGGCGAGACCAGGAGCGGCAAGAGC AGAGGACCCAAGCCCAAAGTGAAACGAGTATCGCCAGTGCCGGCCAAAGA TTTCAAGGTGGAACACATGGACGGAGGGCGGTTCAATGCATTGCAGCGGC TGGACAGCATGCTGGACACGCCCAAGCCGCGCGAGGTTAAGATTTTGTAA GTGACTCGACTAGATGCAAATAAAGCGAACACGAATGTGCCTTCAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 23776460..23776911 | 537..86 | 2260 | 100 | Minus |
chr3R | 27901430 | chr3R | 23775671..23775887 | 1044..828 | 1070 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 23776105..23776304 | 736..537 | 1000 | 100 | Minus |
chr3R | 27901430 | chr3R | 23775955..23776047 | 828..736 | 450 | 98.9 | Minus |
chr3R | 27901430 | chr3R | 23776964..23777051 | 88..1 | 440 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 27953498..27953949 | 537..86 | 2260 | 100 | Minus |
3R | 32079331 | 3R | 27952707..27952925 | 1046..828 | 1095 | 100 | Minus |
3R | 32079331 | 3R | 27953143..27953342 | 736..537 | 1000 | 100 | Minus |
3R | 32079331 | 3R | 27952993..27953085 | 828..736 | 465 | 100 | Minus |
3R | 32079331 | 3R | 27954002..27954089 | 88..1 | 440 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 27694329..27694780 | 537..86 | 2260 | 100 | Minus |
3R | 31820162 | 3R | 27693538..27693756 | 1046..828 | 1095 | 100 | Minus |
3R | 31820162 | 3R | 27693974..27694173 | 736..537 | 1000 | 100 | Minus |
3R | 31820162 | 3R | 27693824..27693916 | 828..736 | 465 | 100 | Minus |
3R | 31820162 | 3R | 27694833..27694920 | 88..1 | 440 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 23776106..23776303 | 538..735 | 100 | <- | Minus |
chr3R | 23775671..23775886 | 829..1044 | 99 | <- | Minus |
chr3R | 23775955..23776047 | 736..828 | 98 | <- | Minus |
chr3R | 23776460..23776908 | 89..537 | 100 | <- | Minus |
chr3R | 23776964..23777051 | 1..88 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4951-RA | 1..963 | 38..1000 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4951-RA | 1..963 | 38..1000 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4951-RA | 1..963 | 38..1000 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4951-RA | 1..963 | 38..1000 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4951-RA | 1..963 | 38..1000 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4951-RA | 24..1067 | 1..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4951-RA | 24..1067 | 1..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4951-RA | 24..1067 | 1..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4951-RA | 24..1067 | 1..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4951-RA | 24..1067 | 1..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27952709..27952924 | 829..1044 | 100 | <- | Minus |
3R | 27952993..27953085 | 736..828 | 100 | <- | Minus |
3R | 27953144..27953341 | 538..735 | 100 | <- | Minus |
3R | 27953498..27953946 | 89..537 | 100 | <- | Minus |
3R | 27954002..27954089 | 1..88 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27952709..27952924 | 829..1044 | 100 | <- | Minus |
3R | 27952993..27953085 | 736..828 | 100 | <- | Minus |
3R | 27953144..27953341 | 538..735 | 100 | <- | Minus |
3R | 27953498..27953946 | 89..537 | 100 | <- | Minus |
3R | 27954002..27954089 | 1..88 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27952709..27952924 | 829..1044 | 100 | <- | Minus |
3R | 27952993..27953085 | 736..828 | 100 | <- | Minus |
3R | 27953144..27953341 | 538..735 | 100 | <- | Minus |
3R | 27953498..27953946 | 89..537 | 100 | <- | Minus |
3R | 27954002..27954089 | 1..88 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 23778431..23778646 | 829..1044 | 100 | <- | Minus |
arm_3R | 23778715..23778807 | 736..828 | 100 | <- | Minus |
arm_3R | 23778866..23779063 | 538..735 | 100 | <- | Minus |
arm_3R | 23779220..23779668 | 89..537 | 100 | <- | Minus |
arm_3R | 23779724..23779811 | 1..88 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 27693540..27693755 | 829..1044 | 100 | <- | Minus |
3R | 27693824..27693916 | 736..828 | 100 | <- | Minus |
3R | 27693975..27694172 | 538..735 | 100 | <- | Minus |
3R | 27694329..27694777 | 89..537 | 100 | <- | Minus |
3R | 27694833..27694920 | 1..88 | 100 | Minus |
Translation from 0 to 999
> GH18902.hyp YGHIRTHSNFIKMSFSAIGDCQLISQLYQYKKHRVICSVKVLPTPVTHFE RESKNDFHWMTADRWSRIECGLWRLFENLKQWQDAYQLDTELIIDHIIVR VQATNKSHPATVALLAGTESSSKDLCLDLQLQYITQEDTTIVDVIPAKRE LATEAETNGTRPTSRKIRVANSGSKPKAGTQSKPKHIDADNEDDKSSTTA SQPTKIKSERRSISQGGEKDKASSSSPSSSQQSNRIKRSHSPSQQNSRSS SVEAKPARRSGRSPIRPSRFKNFVVGETRSGKSRGPKPKVKRVSPVPAKD FKVEHMDGGRFNALQRLDSMLDTPKPREVKIL*
Translation from 37 to 999
> GH18902.pep MSFSAIGDCQLISQLYQYKKHRVICSVKVLPTPVTHFERESKNDFHWMTA DRWSRIECGLWRLFENLKQWQDAYQLDTELIIDHIIVRVQATNKSHPATV ALLAGTESSSKDLCLDLQLQYITQEDTTIVDVIPAKRELATEAETNGTRP TSRKIRVANSGSKPKAGTQSKPKHIDADNEDDKSSTTASQPTKIKSERRS ISQGGEKDKASSSSPSSSQQSNRIKRSHSPSQQNSRSSSVEAKPARRSGR SPIRPSRFKNFVVGETRSGKSRGPKPKVKRVSPVPAKDFKVEHMDGGRFN ALQRLDSMLDTPKPREVKIL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16135-PA | 448 | GF16135-PA | 1..322 | 1..320 | 923 | 59 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12080-PA | 439 | GG12080-PA | 1..313 | 1..320 | 1279 | 79.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19163-PA | 467 | GH19163-PA | 1..340 | 1..320 | 435 | 36.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4951-PB | 446 | CG4951-PB | 1..320 | 1..320 | 1645 | 100 | Plus |
CG4951-PA | 320 | CG4951-PA | 1..320 | 1..320 | 1645 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23268-PA | 469 | GI23268-PA | 1..342 | 1..320 | 490 | 36.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23879-PA | 247 | GL23879-PA | 1..239 | 1..264 | 379 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18549-PB | 335 | GA18549-PB | 1..286 | 1..264 | 367 | 37.4 | Plus |
Dpse\GA18549-PA | 460 | GA18549-PA | 1..286 | 1..264 | 366 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16306-PA | 319 | GM16306-PA | 1..319 | 1..320 | 1529 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18044-PA | 319 | GD18044-PA | 1..319 | 1..320 | 1520 | 91.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10769-PA | 479 | GJ10769-PA | 1..351 | 1..320 | 514 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22531-PA | 269 | GK22531-PA | 1..263 | 48..320 | 324 | 38.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10525-PA | 319 | GE10525-PA | 1..319 | 1..320 | 1382 | 83.4 | Plus |