BDGP Sequence Production Resources |
Search the DGRC for GH18921
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 189 |
Well: | 21 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5862-RA |
Protein status: | GH18921.pep: gold |
Preliminary Size: | 1172 |
Sequenced Size: | 1073 |
Gene | Date | Evidence |
---|---|---|
CG5862 | 2001-01-01 | Release 2 assignment |
CG5862 | 2001-10-10 | Blastp of sequenced clone |
CG5862 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5862 | 2008-04-29 | Release 5.5 accounting |
CG5862 | 2008-08-15 | Release 5.9 accounting |
CG5862 | 2008-12-18 | 5.12 accounting |
1073 bp (1073 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060740
> GH18921.complete AAAGCATTGCGTGCACCAGGCTAGGAAGCCTCCCAACGTATTCGCAATGG ATCTGATCATTCTCGTGGGGATTGCCGTAGCTCTTTTAGTTGTGATCGTC ACACTGTACCTGCTGCAAAAGAAAAACGCCGCCCCAGAAACCAAGGTAGC TGCAGCTCCTCAACGTGGCGTTCCACAGCGCGCCCAGGAGGGTGTTCCGC GTCGGGCTCAAATAGCTCGAAATCAGCGCAATCGACTGCGCCAGAATGTT CCAGCGGCTCCAGTCGCCGCGGCAGCTGGTGCTCTTCCGGCTGCCGGCGA CTCTGACCACGAGGACGAGGGTCAGGTCGATGGTGATGAGGCACGTGTGC CCCAGGGAGCGGTGCTGGATGAGAAAATGGGTGCTAAGAAGCGTGCCAAG ATGGAGGCCAAGGAGCAGAAGCGGCTTCAGCGGGAGCAGGAACTGCACGA TCGCGAACAGCGCAAGGTGAAGGAGGCGAAGGAGGAGGCGGAGCGCAAGC AGCAAGAAGACCTTGAGGCAGAGGCCGAGCGCAAGCGGGTGGATGCCGAG CGCCTGGCCAAAGAGGAACGGGAGCGCAAGGAGCACGAGGAGTACCTGAA GATGAAGGCTGCCTTCAGTGTGGAGGAAGAGGGCTTCGAAGAGGGCGACG CCGACGACCAGGACAACCTCCTGGCCGACTTCATTCAGTACATTAGGGAC AACAAGGTGGTGGTCCTAGAGGATCTGGCCGTGGCCTTCAAATTAAAGAC GCAGCAGGTCATTGATCGCATCCAGAACCTGCAGGCCGATGGCACCCTCA CCGGCGTCATAGACGACCGCGGCAAGTTCATCTATGTTTCCGAGAAGGAG CTATTGGCCGTGGCCAAGTTCATAAAACAACGCGGACGCGTCTCCATCGC CGAGCTGGCCGAGAGCAGCAACAACCTGATTAACCTGACGCCCATTTCTG CCGGCGGCGGCGAAGCCAGCTCCTGATGAGATTTGTTAGCCATTTGTATA TTAAATTTATATTTAGATGCGATGTGTTGGTAGAGTAACAAGAACAAAAC AATTCAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 17038925..17039061 | 1..137 | 100 | -> | Plus |
chr3R | 17039120..17040037 | 138..1055 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5862-RA | 1..930 | 47..976 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5862-RA | 1..930 | 47..976 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5862-RA | 1..930 | 47..976 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5862-RA | 1..930 | 47..976 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5862-RA | 1..930 | 47..976 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5862-RA | 43..1097 | 1..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5862-RA | 55..1109 | 1..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5862-RA | 36..1090 | 1..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5862-RA | 43..1097 | 1..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5862-RA | 36..1090 | 1..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21215114..21215250 | 1..137 | 100 | -> | Plus |
3R | 21215309..21216226 | 138..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21215114..21215250 | 1..137 | 100 | -> | Plus |
3R | 21215309..21216226 | 138..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21215114..21215250 | 1..137 | 100 | -> | Plus |
3R | 21215309..21216226 | 138..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 17040836..17040972 | 1..137 | 100 | -> | Plus |
arm_3R | 17041031..17041948 | 138..1055 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20956140..20957057 | 138..1055 | 100 | Plus | |
3R | 20955945..20956081 | 1..137 | 100 | -> | Plus |
Translation from 0 to 975
> GH18921.hyp KHCVHQARKPPNVFAMDLIILVGIAVALLVVIVTLYLLQKKNAAPETKVA AAPQRGVPQRAQEGVPRRAQIARNQRNRLRQNVPAAPVAAAAGALPAAGD SDHEDEGQVDGDEARVPQGAVLDEKMGAKKRAKMEAKEQKRLQREQELHD REQRKVKEAKEEAERKQQEDLEAEAERKRVDAERLAKEERERKEHEEYLK MKAAFSVEEEGFEEGDADDQDNLLADFIQYIRDNKVVVLEDLAVAFKLKT QQVIDRIQNLQADGTLTGVIDDRGKFIYVSEKELLAVAKFIKQRGRVSIA ELAESSNNLINLTPISAGGGEASS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5862-PA | 309 | CG5862-PA | 1..309 | 16..324 | 1516 | 100 | Plus |
Translation from 46 to 975
> GH18921.pep MDLIILVGIAVALLVVIVTLYLLQKKNAAPETKVAAAPQRGVPQRAQEGV PRRAQIARNQRNRLRQNVPAAPVAAAAGALPAAGDSDHEDEGQVDGDEAR VPQGAVLDEKMGAKKRAKMEAKEQKRLQREQELHDREQRKVKEAKEEAER KQQEDLEAEAERKRVDAERLAKEERERKEHEEYLKMKAAFSVEEEGFEEG DADDQDNLLADFIQYIRDNKVVVLEDLAVAFKLKTQQVIDRIQNLQADGT LTGVIDDRGKFIYVSEKELLAVAKFIKQRGRVSIAELAESSNNLINLTPI SAGGGEASS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23066-PA | 304 | GF23066-PA | 1..303 | 1..305 | 1137 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24454-PA | 312 | GG24454-PA | 1..312 | 1..309 | 1345 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19408-PA | 303 | GH19408-PA | 1..303 | 1..307 | 992 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5862-PA | 309 | CG5862-PA | 1..309 | 1..309 | 1516 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22611-PA | 310 | GI22611-PA | 1..307 | 1..305 | 1139 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12371-PA | 309 | GL12371-PA | 1..309 | 1..309 | 1151 | 82.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19186-PA | 309 | GA19186-PA | 1..309 | 1..309 | 1151 | 82.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15076-PA | 223 | GM15076-PA | 1..216 | 1..216 | 1057 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19406-PA | 293 | GD19406-PA | 1..276 | 1..276 | 1344 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23857-PA | 307 | GJ23857-PA | 1..307 | 1..307 | 1079 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14514-PA | 307 | GK14514-PA | 1..307 | 1..307 | 1038 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25716-PA | 312 | GE25716-PA | 1..312 | 1..309 | 1321 | 91.3 | Plus |