Clone GH18995 Report

Search the DGRC for GH18995

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:189
Well:95
Vector:pOT2
Associated Gene/Transcriptfzr2-RA
Protein status:GH18995.pep: gold
Preliminary Size:1520
Sequenced Size:1441

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2970 2001-01-01 Release 2 assignment
CG16783 2001-01-01 Release 2 assignment
CG16783 2001-07-04 Blastp of sequenced clone
CG16783 2003-01-01 Sim4 clustering to Release 3
fzr2 2008-04-29 Release 5.5 accounting
fzr2 2008-08-15 Release 5.9 accounting
fzr2 2008-12-18 5.12 accounting

Clone Sequence Records

GH18995.complete Sequence

1441 bp (1441 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051537

> GH18995.complete
GAATTCGGAGATGTTTCAATCAGAGTATCAGCAACGATTGCTTCCGGGCG
TCGCCGTCGGCAAAAAGGAGGACATCGATCTGCGCTGCATTCCCACACGA
GCTGGTAACCACTGGAACCGGAACTTTGTCAATGCTCCGGGAGACTCCAA
TGTGTACGAGAGCTCTGTGTACTCATGCCTCTTGCGCAACGAGTTCCTGG
ACGAGAACATCACTTCCTTGGAGAACTGCGAGCAGACCGCACAGGTCCAT
GCCCAGACTGATGATTTTAGGGATCGGCATAACCGTATCTTTGGTTTTGC
CAGCGGTTCTTCGTCGCCAGTACGCACACCATTCGCCAACATCAGCGAGA
GCAGCCAGCGGCTGCTCAGCATCTTCAAGAGACCCATGCGCCGACTGCCA
CGTCGCCCGTACAAGATACTCGATGCGCCGGAGCTGCAAGACGACTTCTA
CCTGAACCTTATTGACTGGTCGTCGAAAAACACCCTGGCCGTTGGTCTCG
GGTGCTCGGTTTATCTCTGGAGTGCCGTCAGTGGTCAGGTGACGCGACTA
TGCGACTTCAACAATGAGGATAACCTGATTACAGCAGTTAGCTGGCACGG
TGAAGGCCGGCAGGTGGCCATTGGCACCCAGTCCGGGTACGTGACCATTT
GGGATGCCGAGAACCAAAAGCAGATAAACCGACTGGAAGAGCACTCGGCG
CGTGTAACGGCGCTAGCTTGGTGCGGCAACCGATTGGCCAGTGGCTCCCG
CGACCGCTCAATTTTGCAGCGGGATATCCGCAATCCGCCGACGCACATAA
CCCGCTGCTTGCGCGGACACAAGCTAGAGGTGTGTGGCCTACAGTGGTCG
CCCAGCAATCGATACTTGGCCAGCGGTGGCAGCGACAACCGCCTGTTGGT
TTGGACCGACGATTGGCCGGAGCCCATTTACGCCTTCGACGAGCACAAGG
CGGTGGTCAAGGCGCTGGGCTGGTCGCCACATAAGTCCGGTCTTCTGGCC
AGTGGCGGTGGGTCCGCCGATCGCTGCTTGCGCTTTTGGAACGTCCTCAC
CGGGAAGCTGGTGAAGTGCATCAACACCGGCGCCCAGATCAGCAACCTGG
CCTGGGCCAGGGATTCCCGAGAGCTGGTTACCACCCACGGACACGCGCAG
CCACAGGTCATTGCCTGGCGCTATCCCTCGCTGAAGCAGATGGCCAGGCT
GTCCGGGCACACACAGCGGGTACTCCACCTGTCAGTGAGTCCGGATAACG
AGTCCATAGTGACTGGCGGCGCAGATGAGACGCTTCGCTTCTGGACCGTT
TTTACCAAACAGAAAATATCCAAAGAGCCAAACTCCGTGCTCCGTTTGTT
TAAAGGCATAAGATGAGGACAAAATTGCGACGTATTCTTTGTGCTACGAT
AAATTATATTTGTTACCATCTAAAAAAAAAAAAAAAAAAAA

GH18995.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:35:11
Subject Length Description Subject Range Query Range Score Percent Strand
fzr2-RA 1594 fzr2-RA 171..1594 1..1424 7120 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:50:06
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 19836750..19838170 1..1421 6985 99.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:58:45 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:50:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23950676..23952099 1..1424 7120 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:56:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 23951875..23953298 1..1424 7120 100 Plus
Blast to na_te.dros performed on 2019-03-16 02:50:04 has no hits.

GH18995.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:50:48 Download gff for GH18995.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 19836750..19838170 1..1421 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:48:40 Download gff for GH18995.complete
Subject Subject Range Query Range Percent Splice Strand
fzr2-RA 1..1356 11..1366 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:25:24 Download gff for GH18995.complete
Subject Subject Range Query Range Percent Splice Strand
fzr2-RA 1..1356 11..1366 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:01:45 Download gff for GH18995.complete
Subject Subject Range Query Range Percent Splice Strand
fzr2-RA 1..1356 11..1366 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:58:23 Download gff for GH18995.complete
Subject Subject Range Query Range Percent Splice Strand
fzr2-RA 1..1356 11..1366 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:23:03 Download gff for GH18995.complete
Subject Subject Range Query Range Percent Splice Strand
fzr2-RA 1..1356 11..1366 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:23:55 Download gff for GH18995.complete
Subject Subject Range Query Range Percent Splice Strand
fzr2-RA 171..1591 1..1421 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:25:23 Download gff for GH18995.complete
Subject Subject Range Query Range Percent Splice Strand
fzr2-RA 171..1591 1..1421 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:01:45 Download gff for GH18995.complete
Subject Subject Range Query Range Percent Splice Strand
fzr2-RA 30..1450 1..1421 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:58:23 Download gff for GH18995.complete
Subject Subject Range Query Range Percent Splice Strand
fzr2-RA 171..1591 1..1421 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:23:03 Download gff for GH18995.complete
Subject Subject Range Query Range Percent Splice Strand
fzr2-RA 30..1450 1..1421 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:50:48 Download gff for GH18995.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23950676..23952096 1..1421 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:50:48 Download gff for GH18995.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23950676..23952096 1..1421 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:50:48 Download gff for GH18995.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23950676..23952096 1..1421 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:01:45 Download gff for GH18995.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19838199..19839619 1..1421 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:36:12 Download gff for GH18995.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23951893..23953313 1..1421 100   Plus

GH18995.hyp Sequence

Translation from 0 to 1365

> GH18995.hyp
NSEMFQSEYQQRLLPGVAVGKKEDIDLRCIPTRAGNHWNRNFVNAPGDSN
VYESSVYSCLLRNEFLDENITSLENCEQTAQVHAQTDDFRDRHNRIFGFA
SGSSSPVRTPFANISESSQRLLSIFKRPMRRLPRRPYKILDAPELQDDFY
LNLIDWSSKNTLAVGLGCSVYLWSAVSGQVTRLCDFNNEDNLITAVSWHG
EGRQVAIGTQSGYVTIWDAENQKQINRLEEHSARVTALAWCGNRLASGSR
DRSILQRDIRNPPTHITRCLRGHKLEVCGLQWSPSNRYLASGGSDNRLLV
WTDDWPEPIYAFDEHKAVVKALGWSPHKSGLLASGGGSADRCLRFWNVLT
GKLVKCINTGAQISNLAWARDSRELVTTHGHAQPQVIAWRYPSLKQMARL
SGHTQRVLHLSVSPDNESIVTGGADETLRFWTVFTKQKISKEPNSVLRLF
KGIR*

GH18995.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 10:02:08
Subject Length Description Subject Range Query Range Score Percent Strand
fzr2-PA 451 CG16783-PA 1..451 4..454 2406 100 Plus
rap-PA 478 CG3000-PA 1..478 4..454 1184 49.2 Plus
rap-PB 478 CG3000-PB 1..478 4..454 1184 49.2 Plus
fzy-PA 526 CG4274-PA 188..508 126..442 733 42.4 Plus
ago-PA 1326 CG15010-PA 927..1267 67..435 199 23.3 Plus

GH18995.pep Sequence

Translation from 10 to 1365

> GH18995.pep
MFQSEYQQRLLPGVAVGKKEDIDLRCIPTRAGNHWNRNFVNAPGDSNVYE
SSVYSCLLRNEFLDENITSLENCEQTAQVHAQTDDFRDRHNRIFGFASGS
SSPVRTPFANISESSQRLLSIFKRPMRRLPRRPYKILDAPELQDDFYLNL
IDWSSKNTLAVGLGCSVYLWSAVSGQVTRLCDFNNEDNLITAVSWHGEGR
QVAIGTQSGYVTIWDAENQKQINRLEEHSARVTALAWCGNRLASGSRDRS
ILQRDIRNPPTHITRCLRGHKLEVCGLQWSPSNRYLASGGSDNRLLVWTD
DWPEPIYAFDEHKAVVKALGWSPHKSGLLASGGGSADRCLRFWNVLTGKL
VKCINTGAQISNLAWARDSRELVTTHGHAQPQVIAWRYPSLKQMARLSGH
TQRVLHLSVSPDNESIVTGGADETLRFWTVFTKQKISKEPNSVLRLFKGI
R*

GH18995.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:42:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20850-PA 478 GF20850-PA 1..478 1..451 1192 49.1 Plus
Dana\GF14581-PA 529 GF14581-PA 189..525 123..445 758 43.1 Plus
Dana\GF16340-PA 832 GF16340-PA 151..396 190..436 188 24 Plus
Dana\GF23871-PA 1276 GF23871-PA 875..1221 62..436 183 23.8 Plus
Dana\GF20651-PA 698 GF20651-PA 411..660 190..436 170 24.1 Plus
Dana\GF16340-PA 832 GF16340-PA 190..412 145..365 161 26 Plus
Dana\GF20651-PA 698 GF20651-PA 465..674 159..365 154 25.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:42:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22907-PA 791 GG22907-PA 274..698 6..429 2061 89.2 Plus
Dere\GG18523-PA 478 GG18523-PA 1..478 1..451 1194 49.7 Plus
Dere\GG25203-PA 526 GG25203-PA 188..522 123..445 749 42.4 Plus
Dere\GG12984-PA 804 GG12984-PA 119..393 163..436 181 23.7 Plus
Dere\GG19653-PA 1056 GG19653-PA 10..240 184..377 180 27.7 Plus
Dere\GG12984-PA 804 GG12984-PA 231..409 190..365 159 28.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:42:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17898-PA 478 GH17898-PA 1..478 1..451 1187 48.9 Plus
Dgri\GH10315-PA 538 GH10315-PA 199..519 123..439 759 43.3 Plus
Dgri\GH12580-PA 982 GH12580-PA 10..240 184..377 184 28.5 Plus
Dgri\GH11222-PA 766 GH11222-PA 475..724 184..432 182 25.1 Plus
Dgri\anon-2-PA 1411 GH15539-PA 1010..1352 62..432 179 23.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:17:00
Subject Length Description Subject Range Query Range Score Percent Strand
fzr2-PA 451 CG16783-PA 1..451 1..451 2406 100 Plus
fzr-PA 478 CG3000-PA 1..478 1..451 1184 49.2 Plus
fzr-PB 478 CG3000-PB 1..478 1..451 1184 49.2 Plus
fzy-PA 526 CG4274-PA 188..508 123..439 733 42.4 Plus
ago-PA 1326 CG15010-PA 927..1267 64..432 199 23.3 Plus
ago-PB 1326 CG15010-PB 927..1267 64..432 199 23.3 Plus
ago-PC 1326 CG15010-PC 927..1267 64..432 199 23.3 Plus
CG7568-PE 482 CG7568-PE 208..481 169..443 196 25.4 Plus
ebi-PA 700 CG4063-PA 409..662 184..436 195 24.7 Plus
CG7568-PD 467 CG7568-PD 208..466 169..428 194 26.5 Plus
Hira-PA 1047 CG12153-PA 10..239 184..376 192 28.5 Plus
Wdr33-PB 807 CG1109-PB 149..394 190..436 185 23.6 Plus
Wdr33-PA 807 CG1109-PA 149..394 190..436 185 23.6 Plus
Nle-PA 488 CG2863-PA 179..486 164..428 177 24.2 Plus
Wdr33-PB 807 CG1109-PB 232..410 190..365 169 28.3 Plus
Wdr33-PA 807 CG1109-PA 232..410 190..365 169 28.3 Plus
ebi-PA 700 CG4063-PA 467..676 159..365 158 25.3 Plus
wds-PB 361 CG17437-PB 71..195 312..440 158 32.3 Plus
wds-PA 361 CG17437-PA 71..195 312..440 158 32.3 Plus
flr-PB 604 CG10724-PB 84..348 167..428 157 23.1 Plus
flr-PA 608 CG10724-PA 88..352 167..428 157 23.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:42:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15421-PA 478 GI15421-PA 1..478 1..451 1183 48.6 Plus
Dmoj\GI17076-PA 527 GI17076-PA 188..500 123..431 759 44.8 Plus
Dmoj\GI16816-PA 1393 GI16816-PA 992..1334 62..432 191 24.1 Plus
Dmoj\GI21646-PA 723 GI21646-PA 436..685 190..436 185 25.3 Plus
Dmoj\GI23774-PA 804 GI23774-PA 149..394 190..436 174 23.2 Plus
Dmoj\GI23774-PA 804 GI23774-PA 232..410 190..365 155 27.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:42:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14550-PA 472 GL14550-PA 1..472 1..451 1095 47.3 Plus
Dper\GL16343-PA 532 GL16343-PA 193..516 123..442 749 42.6 Plus
Dper\GL11182-PA 640 GL11182-PA 271..546 6..273 748 53.6 Plus
Dper\GL26984-PA 380 GL26984-PA 122..363 190..441 460 38.2 Plus
Dper\GL18875-PA 694 GL18875-PA 407..656 190..436 176 24.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:42:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15568-PA 478 GA15568-PA 1..478 1..451 1197 49.3 Plus
Dpse\GA18074-PA 532 GA18074-PA 193..516 123..442 749 42.6 Plus
Dpse\GA22332-PA 513 GA22332-PA 152..496 90..441 689 38.7 Plus
Dpse\GA29186-PA 514 GA29186-PA 153..497 90..441 685 38.7 Plus
Dpse\GA10752-PA 812 GA10752-PA 149..394 190..436 189 24 Plus
Dpse\GA10752-PA 812 GA10752-PA 188..410 145..365 161 26 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:42:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16067-PA 774 GM16067-PA 274..710 1..444 2054 88.1 Plus
Dsec\GM12670-PA 940 GM12670-PA 503..940 30..451 1170 51.5 Plus
Dsec\GM18667-PA 526 GM18667-PA 188..508 123..439 741 42.4 Plus
Dsec\GM12236-PA 446 GM12236-PA 187..445 169..428 184 25.7 Plus
Dsec\GM17533-PA 1047 GM17533-PA 10..240 184..377 184 27.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:42:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16281-PA 478 GD16281-PA 1..478 1..451 1197 49.7 Plus
Dsim\GD24052-PA 526 GD24052-PA 188..508 123..439 741 42.4 Plus
Dsim\GD17720-PA 446 GD17720-PA 187..445 169..428 184 25.7 Plus
Dsim\GD19809-PA 807 GD19809-PA 120..394 163..436 182 23.7 Plus
Dsim\GD13273-PA 1328 GD13273-PA 927..1273 62..436 174 23.5 Plus
Dsim\GD19809-PA 807 GD19809-PA 232..410 190..365 160 28.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:42:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16380-PA 478 GJ16380-PA 1..478 1..451 1189 48.6 Plus
Dvir\GJ10640-PA 529 GJ10640-PA 190..510 123..439 760 43.7 Plus
Dvir\GJ12563-PA 1354 GJ12563-PA 953..1295 62..432 186 23.9 Plus
Dvir\GJ17774-PA 709 GJ17774-PA 422..671 190..436 184 24.9 Plus
Dvir\GJ15893-PA 991 GJ15893-PA 10..240 184..377 173 28.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:42:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25147-PA 478 GK25147-PA 1..478 1..451 1196 49.3 Plus
Dwil\GK23987-PA 522 GK23987-PA 183..513 123..448 752 42.9 Plus
Dwil\GK13364-PA 820 GK13364-PA 149..394 190..436 181 23.6 Plus
Dwil\GK24403-PA 766 GK24403-PA 479..728 190..436 178 25.5 Plus
Dwil\GK25579-PA 1032 GK25579-PA 10..240 184..377 176 28.1 Plus
Dwil\GK13364-PA 820 GK13364-PA 188..410 145..365 159 26 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:42:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14345-PA 796 GE14345-PA 274..703 1..429 2064 90.9 Plus
Dyak\GE16840-PA 478 GE16840-PA 1..478 1..451 1194 49.3 Plus
Dyak\GE21464-PA 526 GE21464-PA 188..522 123..445 744 42.1 Plus
Dyak\GE15728-PA 1054 GE15728-PA 10..240 184..377 186 27.8 Plus
Dyak\GE10447-PA 467 GE10447-PA 208..466 169..428 181 25.7 Plus