BDGP Sequence Production Resources |
Search the DGRC for GH19029
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 190 |
Well: | 29 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5287-RA |
Protein status: | GH19029.pep: gold |
Preliminary Size: | 1741 |
Sequenced Size: | 1579 |
Gene | Date | Evidence |
---|---|---|
CG5287 | 2001-01-01 | Release 2 assignment |
CG5287 | 2001-07-04 | Blastp of sequenced clone |
CG5287 | 2008-04-29 | Release 5.5 accounting |
CG5287 | 2008-08-15 | Release 5.9 accounting |
CG5287 | 2008-12-18 | 5.12 accounting |
1579 bp (1579 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051538
> GH19029.complete AACAGCTGAGTTTGTTGTTATCAGCAATTTGAGTTTCAATTGCGTGTACT TTTTTTTGTCGGCGTAATTGATTTCTGCACCATGATCGAGTGATCGGCTG GTTTTCCGCGGCCTCCCACTATCCCAATTGAAACAGCGCACTCCGTACGC GTGACTCCGGCAAATTTGCTGCGCACAGAGCTGCACCAGCTAATTGAATT AGTGCAGCGGAAGGTGGATTTTCAAGGCCGACCATGTCGGGAGTCGCCAT AGCCATCAATGCGGCCATTTCGGGCGCCGCCTACTGCATGACAGTCCGGA TGATACCCCGCTTCCGCGAGATGTTCATCAAGGCCAATCTCTTTGGCAAC GATCTGTGCAAGAAGGACAAGCCGCAGGTACCTGAATCCTTTGGTGTGCT TATTGGCTGTGTGTTCCTGGTGTCCTTGTTTCTGTTCATACCGATTCCCT TCGCCTTCGACGAGGCAGCTGCCACGGATGCGATTACTGGAGGCAAACCA GATACCTTTCCACATGATAAGTTCGTGGAATTGATTGCCGCCCTTCTTTC CATTTGCTGCATGATCTTCTTGGGCTTCGCCGATGACGTTCTCGACCTGC GATGGCGCCACAAGCTCCTGTTGCCCACCATCGCCACGTTGCCGCTGCTA ATGGTGTACTACGTAAACTATAACTCCACGACGGTCATTATGCCCAACTT TGCAAGGAATCTGATTGGGACCTCCTTGAATATAGGTGCCTTGTACTACG TCTTCATGGGCATGTTGGCGGTATTCTGCACAAATGCCATCAACATCCTG GCGGGCATCAATGGCCTGGAGGTGGGACAATCCTTTATTATTGCAGGCTC CATTCTGGTCTTCAATGCCATTGAACTGTTGCTCGGTCACCAGGTGGATT CGCATATATTCTCCATTTACTTCATGCTGCCTTTCCTGGCCACCACCCTA GCGCTATGGAAGTTCAACAAATATCCATCGCAGGTGTTTGTTGGGGACAC CTACTGCTACTTTGCCGGCATGACTTTCGCCGTGGTTGGAATCCTGGGCC ACTTCAGCAAGACGCTGCTGCTCTTCTTCCTGCCGCAGATCCTGAATTTC CTGTACTCCACGCCGCAGCTGTTCCACTTTGTGCCATGTCCGCGTCACCG GCTGCCCAAGTACGACAGCAAGACGGATCTGCTCCACATCAGCACCACGG AGTTTCGCCTGGAGGATCTCAACGCTCCGGGTCGCCTGATGGTCACAGTA CTGCGGAACTTGCGACTAATAAGCTGGCATACCAAAGCGGACGGAGTTGT TAGGACCAACAACTTTACGCTCATTAACTTTGTCCTAGTCGTTTTCGGAC CTGTCCACGAGCGAGTGGTCACCCAGATGCTGATGGGATTCCAGGTGCTG TGTACACTGATTGCCCTGACCATACGATATCCACTGGCCAACTACTTCTA TGCGAAAACGTAGCCCTCGATTTCATCATTCTTCGATTCTGATATTTATT GTAGTAAGCCTTTGCTAAGTTAACTATACAAACAGAATACATTTATTTAA TGCCTACACAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 13181588..13182176 | 971..1559 | 2945 | 100 | Plus |
chr2L | 23010047 | chr2L | 13177932..13178310 | 1..379 | 1895 | 100 | Plus |
chr2L | 23010047 | chr2L | 13178846..13179082 | 734..970 | 1170 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 13178572..13178789 | 520..737 | 1090 | 100 | Plus |
chr2L | 23010047 | chr2L | 13178370..13178511 | 380..521 | 710 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13182907..13183499 | 971..1563 | 2965 | 100 | Plus |
2L | 23513712 | 2L | 13179245..13179623 | 1..379 | 1895 | 100 | Plus |
2L | 23513712 | 2L | 13180159..13180395 | 734..970 | 1185 | 100 | Plus |
2L | 23513712 | 2L | 13179885..13180102 | 520..737 | 1090 | 100 | Plus |
2L | 23513712 | 2L | 13179683..13179824 | 380..521 | 710 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13182907..13183499 | 971..1563 | 2965 | 100 | Plus |
2L | 23513712 | 2L | 13179245..13179623 | 1..379 | 1895 | 100 | Plus |
2L | 23513712 | 2L | 13180159..13180395 | 734..970 | 1185 | 100 | Plus |
2L | 23513712 | 2L | 13179885..13180102 | 520..737 | 1090 | 100 | Plus |
2L | 23513712 | 2L | 13179683..13179824 | 380..521 | 710 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 13177932..13178310 | 1..379 | 100 | -> | Plus |
chr2L | 13178370..13178511 | 380..521 | 100 | -> | Plus |
chr2L | 13178574..13178787 | 522..735 | 100 | -> | Plus |
chr2L | 13178848..13179082 | 736..970 | 99 | -> | Plus |
chr2L | 13181588..13182176 | 971..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5287-RA | 1..1230 | 234..1463 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5287-RA | 1..1230 | 234..1463 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5287-RA | 1..1230 | 234..1463 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5287-RA | 1..1230 | 234..1463 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5287-RA | 1..1230 | 234..1463 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5287-RA | 1..1559 | 1..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5287-RA | 1..1559 | 1..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5287-RA | 1..1557 | 3..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5287-RA | 1..1559 | 1..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5287-RA | 1..1557 | 3..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13180161..13180395 | 736..970 | 100 | -> | Plus |
2L | 13179245..13179623 | 1..379 | 100 | -> | Plus |
2L | 13179683..13179824 | 380..521 | 100 | -> | Plus |
2L | 13179887..13180100 | 522..735 | 100 | -> | Plus |
2L | 13182907..13183495 | 971..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13180161..13180395 | 736..970 | 100 | -> | Plus |
2L | 13179245..13179623 | 1..379 | 100 | -> | Plus |
2L | 13179683..13179824 | 380..521 | 100 | -> | Plus |
2L | 13179887..13180100 | 522..735 | 100 | -> | Plus |
2L | 13182907..13183495 | 971..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13180161..13180395 | 736..970 | 100 | -> | Plus |
2L | 13179245..13179623 | 1..379 | 100 | -> | Plus |
2L | 13179683..13179824 | 380..521 | 100 | -> | Plus |
2L | 13179887..13180100 | 522..735 | 100 | -> | Plus |
2L | 13182907..13183495 | 971..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 13179245..13179623 | 1..379 | 100 | -> | Plus |
arm_2L | 13179683..13179824 | 380..521 | 100 | -> | Plus |
arm_2L | 13179887..13180100 | 522..735 | 100 | -> | Plus |
arm_2L | 13180161..13180395 | 736..970 | 100 | -> | Plus |
arm_2L | 13182907..13183495 | 971..1559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13180161..13180395 | 736..970 | 100 | -> | Plus |
2L | 13179245..13179623 | 1..379 | 100 | -> | Plus |
2L | 13179683..13179824 | 380..521 | 100 | -> | Plus |
2L | 13179887..13180100 | 522..735 | 100 | -> | Plus |
2L | 13182907..13183495 | 971..1559 | 100 | Plus |
Translation from 233 to 1462
> GH19029.pep MSGVAIAINAAISGAAYCMTVRMIPRFREMFIKANLFGNDLCKKDKPQVP ESFGVLIGCVFLVSLFLFIPIPFAFDEAAATDAITGGKPDTFPHDKFVEL IAALLSICCMIFLGFADDVLDLRWRHKLLLPTIATLPLLMVYYVNYNSTT VIMPNFARNLIGTSLNIGALYYVFMGMLAVFCTNAINILAGINGLEVGQS FIIAGSILVFNAIELLLGHQVDSHIFSIYFMLPFLATTLALWKFNKYPSQ VFVGDTYCYFAGMTFAVVGILGHFSKTLLLFFLPQILNFLYSTPQLFHFV PCPRHRLPKYDSKTDLLHISTTEFRLEDLNAPGRLMVTVLRNLRLISWHT KADGVVRTNNFTLINFVLVVFGPVHERVVTQMLMGFQVLCTLIALTIRYP LANYFYAKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14223-PA | 409 | GF14223-PA | 1..409 | 1..409 | 2000 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23818-PA | 409 | GG23818-PA | 1..409 | 1..409 | 2093 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11394-PA | 412 | GH11394-PA | 1..407 | 1..407 | 1849 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5287-PA | 409 | CG5287-PA | 1..409 | 1..409 | 2126 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18098-PA | 410 | GI18098-PA | 1..407 | 1..407 | 1832 | 84 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24744-PA | 409 | GL24744-PA | 1..409 | 1..409 | 2004 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18787-PA | 409 | GA18787-PA | 1..409 | 1..409 | 2006 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10202-PA | 409 | GM10202-PA | 1..409 | 1..409 | 2128 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23869-PA | 409 | GD23869-PA | 1..409 | 1..409 | 2112 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16886-PA | 410 | GJ16886-PA | 1..407 | 1..407 | 1887 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23958-PA | 412 | GK23958-PA | 1..410 | 1..409 | 1931 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18620-PA | 409 | GE18620-PA | 1..409 | 1..409 | 2110 | 97.6 | Plus |
Translation from 233 to 1462
> GH19029.hyp MSGVAIAINAAISGAAYCMTVRMIPRFREMFIKANLFGNDLCKKDKPQVP ESFGVLIGCVFLVSLFLFIPIPFAFDEAAATDAITGGKPDTFPHDKFVEL IAALLSICCMIFLGFADDVLDLRWRHKLLLPTIATLPLLMVYYVNYNSTT VIMPNFARNLIGTSLNIGALYYVFMGMLAVFCTNAINILAGINGLEVGQS FIIAGSILVFNAIELLLGHQVDSHIFSIYFMLPFLATTLALWKFNKYPSQ VFVGDTYCYFAGMTFAVVGILGHFSKTLLLFFLPQILNFLYSTPQLFHFV PCPRHRLPKYDSKTDLLHISTTEFRLEDLNAPGRLMVTVLRNLRLISWHT KADGVVRTNNFTLINFVLVVFGPVHERVVTQMLMGFQVLCTLIALTIRYP LANYFYAKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5287-PA | 409 | CG5287-PA | 1..409 | 1..409 | 2126 | 100 | Plus |