BDGP Sequence Production Resources |
Search the DGRC for GH19118
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 191 |
Well: | 18 |
Vector: | pOT2 |
Associated Gene/Transcript | CG42825-RA |
Protein status: | GH19118.pep: gold |
Preliminary Size: | 1747 |
Sequenced Size: | 1735 |
Gene | Date | Evidence |
---|---|---|
CG6640 | 2001-01-01 | Release 2 assignment |
CG6640 | 2001-07-04 | Blastp of sequenced clone |
CG6640 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6640 | 2008-04-29 | Release 5.5 accounting |
CG6640 | 2008-08-15 | Release 5.9 accounting |
CG6640 | 2008-12-18 | 5.12 accounting |
1735 bp (1735 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051541
> GH19118.complete TTTGTCTTCGCAATAGAGTGAAATAGATATAAAGCGATCGGAAATTCAGA ACGATAAGTTTGCCCCACCGCCGTTGGCCATGCAAAACGACAAGTATCCA GCGCCAATAGGCTTTTATCCACCACAAGGACAGCCGGGATATCCACAACC AGCGTCACAGCCAGGATACCCTCAGCCAGGGCAGCCGCAACACATCACAC CGGCGGAGACATACGGACCACAACCACCGCCAATGCCACCGCGGGATCCA CACACCAGAGTGGATCCACCAGGAGGATGCTTTCAGCGCAACCAAAAGAA CAAACCTCAATCCAATGCTGTGGGCGCAGCTGGTCTCATCTTTATCTCTG GAGGTATGAACATAGCGTGGGCGATTGGCTTCCAAGGACCAATCTATTAC CAAACCACCAAGCACAATTACATTGCCTGGTTCATAGGCGCCATTATTGG AGCTTTGGTTACGATGGCGCTGACCAACAAGGTGGCCAAAAAATATATTC TGCAATTTTCTTCAGTGTTGGTGACCGTCGGTGGATTGGTTATTGCCTGC ACCCACAATAATGGAGCTGGAACCACGGCAGCTTGTTACCTAGATGGTAT TGCCAATGGTCTGGTATTTGCCCCATTTATGGCGTTGGTCGGAGAGATCT CGGTTCCCTATTTGAGGGGCAAGGCCAGTGCCACCTTGGAGCAATTGTGC TTTGGAACCGGTATACTTCTTCAGATCCTTTATGTGTCAAATTGGACATA TTCTTCGTATATGACATACAATGATTTTACGTCCGAGAATATGAAAGGAG TGCTGAGCACAATCTACGGCGTTTTGGCCCTTATTATGGGCTCATTTTTT ACCATCGAATCGCCGGTTCTAATGCTGGCCAATAACGAAGAACAGGCGGC CATTGACGCACTGCGTCGGCTACAAAAGCCTGCGGTGCTAACCGAGGAAA CTTACGAGCTTCTGGCGGAGCACAAACGCTACTTGGCCTACAACAAGAAT ATGTCAAAGAGTGAAAGCATTTCCAAAGCGCTGCCCACCTTCATGCGACT TGCATACCTGCGCGCCCTGAATGCTATGAGCATCTCCAGCTTTGTGATCA TCACTTATGTCGTTGCGATCTTAGTCTCCAATGATTTAAGAAATGCGAGC TCCTGGTACATAGGATTAGCCTTTTGCCGTTGGTTGGGATCCCTAATCCC ATCCTTTTGCATGGAGTCCTTGGGCCGAAAGAAGCCTGCGGTCTTTGGCC TGCTCGTAAGCTGCGGCTTGTCGTTTGCCGTGGGTTCACAGTACAATGTA TATACGTATATGAGCCAAGTGACCGTCTTGATAATGATTTTCGAGTTCTT TGCCGGTATGGCCTTCTCATCCAACTCGGCCTACCTGACGGAGGCATATC CCATGGGAGTTAAGCAACACTTTATCGGTTTAACTTTCATCACCGAAATA TTTGTCTTCCTCATCATAAATGTTTGTGACTTCAATTTTGGACAAGGCTA CAACTACTTCTACATCATGGGAGCCATGTACCTGGCGGGAGTGATTCTCG GAGTCCTTACACTGCCGGAGACAAGGAGGATGACCTTGCAAGGTGCCCAG GAGCAGTTCAATAAATTCGTTAACTTCCGCTTTTAATGTTCAAAGGAATT ATAGATTAATAAATCTACTATTAAAGTGCAAGAGGTCTAAGGCCTCTGTA TTCCTCCACATAACGATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6640-RB | 1860 | CG6640-RB | 112..1829 | 1..1718 | 8590 | 100 | Plus |
CG6640-RA | 2839 | CG6640-RA | 1164..2833 | 49..1718 | 8350 | 100 | Plus |
CG32054-RA | 2230 | CG32054-RA | 1005..1063 | 785..843 | 160 | 84.7 | Plus |
CG32054-RA | 2230 | CG32054-RA | 1251..1325 | 1028..1102 | 150 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 10087428..10088643 | 1717..502 | 5930 | 99.2 | Minus |
chr3L | 24539361 | chr3L | 10089443..10089771 | 329..1 | 1630 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 10088704..10088879 | 502..327 | 820 | 97.7 | Minus |
chr3L | 24539361 | chr3L | 10085025..10085345 | 1102..785 | 280 | 73.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 10095753..10096969 | 1718..502 | 6085 | 100 | Minus |
3L | 28110227 | 3L | 10097752..10098080 | 329..1 | 1645 | 100 | Minus |
3L | 28110227 | 3L | 10097030..10097205 | 502..327 | 880 | 100 | Minus |
3L | 28110227 | 3L | 10093369..10093689 | 1102..785 | 265 | 72.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 10088853..10090069 | 1718..502 | 6085 | 100 | Minus |
3L | 28103327 | 3L | 10090852..10091180 | 329..1 | 1645 | 100 | Minus |
3L | 28103327 | 3L | 10090130..10090305 | 502..327 | 880 | 100 | Minus |
3L | 28103327 | 3L | 10086868..10086997 | 706..577 | 170 | 75.3 | Minus |
3L | 28103327 | 3L | 10086731..10086789 | 843..785 | 160 | 84.7 | Minus |
3L | 28103327 | 3L | 10087186..10087313 | 454..327 | 160 | 75 | Minus |
3L | 28103327 | 3L | 10086469..10086543 | 1102..1028 | 150 | 80 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 10087428..10088642 | 503..1717 | 99 | <- | Minus |
chr3L | 10088704..10088876 | 330..502 | 97 | <- | Minus |
chr3L | 10089443..10089771 | 1..329 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6640-RA | 1164..2751 | 49..1636 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42825-RA | 1..1557 | 80..1636 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42825-RA | 1..1557 | 80..1636 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6640-RA | 1164..2751 | 49..1636 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42825-RA | 1..1557 | 80..1636 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6640-RB | 1..1717 | 1..1717 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42825-RA | 1..1717 | 1..1717 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42825-RA | 36..1752 | 1..1717 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6640-RB | 1..1717 | 1..1717 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42825-RA | 36..1752 | 1..1717 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10097752..10098080 | 1..329 | 100 | Minus | |
3L | 10095754..10096968 | 503..1717 | 100 | <- | Minus |
3L | 10097030..10097202 | 330..502 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10097752..10098080 | 1..329 | 100 | Minus | |
3L | 10095754..10096968 | 503..1717 | 100 | <- | Minus |
3L | 10097030..10097202 | 330..502 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10097752..10098080 | 1..329 | 100 | Minus | |
3L | 10095754..10096968 | 503..1717 | 100 | <- | Minus |
3L | 10097030..10097202 | 330..502 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 10088854..10090068 | 503..1717 | 100 | <- | Minus |
arm_3L | 10090130..10090302 | 330..502 | 100 | <- | Minus |
arm_3L | 10090852..10091180 | 1..329 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 10088854..10090068 | 503..1717 | 100 | <- | Minus |
3L | 10090130..10090302 | 330..502 | 100 | <- | Minus |
3L | 10090852..10091180 | 1..329 | 100 | Minus |
Translation from 79 to 1635
> GH19118.pep MQNDKYPAPIGFYPPQGQPGYPQPASQPGYPQPGQPQHITPAETYGPQPP PMPPRDPHTRVDPPGGCFQRNQKNKPQSNAVGAAGLIFISGGMNIAWAIG FQGPIYYQTTKHNYIAWFIGAIIGALVTMALTNKVAKKYILQFSSVLVTV GGLVIACTHNNGAGTTAACYLDGIANGLVFAPFMALVGEISVPYLRGKAS ATLEQLCFGTGILLQILYVSNWTYSSYMTYNDFTSENMKGVLSTIYGVLA LIMGSFFTIESPVLMLANNEEQAAIDALRRLQKPAVLTEETYELLAEHKR YLAYNKNMSKSESISKALPTFMRLAYLRALNAMSISSFVIITYVVAILVS NDLRNASSWYIGLAFCRWLGSLIPSFCMESLGRKKPAVFGLLVSCGLSFA VGSQYNVYTYMSQVTVLIMIFEFFAGMAFSSNSAYLTEAYPMGVKQHFIG LTFITEIFVFLIINVCDFNFGQGYNYFYIMGAMYLAGVILGVLTLPETRR MTLQGAQEQFNKFVNFRF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23844-PA | 519 | GF23844-PA | 1..518 | 1..518 | 1469 | 57.7 | Plus |
Dana\GF23845-PA | 553 | GF23845-PA | 1..553 | 1..518 | 1358 | 50.4 | Plus |
Dana\GF23846-PA | 508 | GF23846-PA | 7..489 | 31..514 | 770 | 37.1 | Plus |
Dana\GF23843-PA | 473 | GF23843-PA | 8..473 | 54..518 | 640 | 33.7 | Plus |
Dana\GF18489-PA | 486 | GF18489-PA | 49..485 | 69..518 | 402 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13988-PA | 571 | GG13988-PA | 32..571 | 13..518 | 1466 | 53.6 | Plus |
Dere\GG13987-PA | 442 | GG13987-PA | 1..347 | 1..350 | 1456 | 81.5 | Plus |
Dere\GG13989-PA | 496 | GG13989-PA | 2..492 | 27..514 | 684 | 35.1 | Plus |
Dere\GG13984-PA | 473 | GG13984-PA | 7..473 | 48..518 | 629 | 34.1 | Plus |
Dere\GG16995-PA | 490 | GG16995-PA | 26..488 | 50..517 | 420 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16561-PA | 538 | GH16561-PA | 1..538 | 1..518 | 1180 | 47.5 | Plus |
Dgri\GH16562-PA | 534 | GH16562-PA | 1..526 | 1..511 | 1030 | 43.6 | Plus |
Dgri\GH16563-PA | 461 | GH16563-PA | 11..460 | 64..513 | 739 | 38.8 | Plus |
Dgri\GH16560-PA | 479 | GH16560-PA | 14..479 | 48..518 | 704 | 34.6 | Plus |
Dgri\GH19546-PA | 492 | GH19546-PA | 12..490 | 36..517 | 430 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42825-PA | 518 | CG6640-PB | 1..518 | 1..518 | 2711 | 100 | Plus |
CG32054-PA | 563 | CG32054-PA | 1..563 | 1..518 | 1514 | 53.3 | Plus |
CG32053-PA | 496 | CG32053-PA | 45..492 | 67..514 | 783 | 39 | Plus |
CG42826-PA | 473 | CG42826-PA | 8..473 | 53..518 | 699 | 34.4 | Plus |
CG17930-PA | 502 | CG17930-PA | 10..495 | 22..512 | 461 | 29.2 | Plus |
CG6901-PA | 485 | CG6901-PA | 8..479 | 31..513 | 453 | 27.9 | Plus |
CG17929-PB | 491 | CG17929-PB | 7..489 | 44..517 | 389 | 25.3 | Plus |
CG14160-PA | 483 | CG14160-PA | 21..481 | 73..512 | 229 | 22.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13853-PA | 569 | GI13853-PA | 32..569 | 9..518 | 1081 | 45.9 | Plus |
Dmoj\GI13854-PA | 489 | GI13854-PA | 18..488 | 45..513 | 729 | 36.3 | Plus |
Dmoj\GI13851-PA | 512 | GI13851-PA | 40..512 | 48..518 | 704 | 35.5 | Plus |
Dmoj\GI22946-PA | 496 | GI22946-PA | 12..489 | 32..512 | 436 | 29 | Plus |
Dmoj\GI22944-PA | 492 | GI22944-PA | 10..488 | 22..515 | 408 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11806-PA | 537 | GL11806-PA | 1..537 | 1..518 | 1325 | 52.9 | Plus |
Dper\GL11795-PA | 472 | GL11795-PA | 8..472 | 54..518 | 758 | 37.8 | Plus |
Dper\GL11817-PA | 490 | GL11817-PA | 2..486 | 35..514 | 709 | 33.7 | Plus |
Dper\GL21598-PA | 493 | GL21598-PA | 45..489 | 70..515 | 427 | 29.7 | Plus |
Dper\GL21599-PA | 497 | GL21599-PA | 66..490 | 88..512 | 380 | 29.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23811-PA | 561 | GA23811-PA | 1..561 | 1..518 | 1354 | 51.8 | Plus |
Dpse\GA23810-PA | 472 | GA23810-PA | 8..472 | 54..518 | 748 | 37.6 | Plus |
Dpse\GA16641-PA | 490 | GA16641-PA | 2..486 | 35..514 | 709 | 33.5 | Plus |
Dpse\GA26344-PA | 499 | GA26344-PA | 51..495 | 70..515 | 427 | 29.9 | Plus |
Dpse\GA14732-PA | 497 | GA14732-PA | 66..490 | 88..512 | 410 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24821-PA | 916 | GM24821-PA | 399..916 | 1..518 | 2507 | 92.3 | Plus |
Dsec\GM24822-PA | 553 | GM24822-PA | 1..553 | 1..518 | 1516 | 53.5 | Plus |
Dsec\GM24823-PA | 496 | GM24823-PA | 2..492 | 27..514 | 764 | 36.7 | Plus |
Dsec\GM24821-PA | 916 | GM24821-PA | 3..382 | 47..427 | 542 | 35.5 | Plus |
Dsec\GM15147-PA | 490 | GM15147-PA | 10..488 | 31..517 | 445 | 28.3 | Plus |
Dsec\GM15149-PA | 502 | GM15149-PA | 51..495 | 69..512 | 411 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12874-PA | 562 | GD12874-PA | 1..562 | 1..518 | 1440 | 51.2 | Plus |
Dsim\GD12873-PA | 720 | GD12873-PA | 536..720 | 334..518 | 863 | 87.6 | Plus |
Dsim\GD12875-PA | 496 | GD12875-PA | 45..492 | 67..514 | 758 | 38.3 | Plus |
Dsim\GD12873-PA | 720 | GD12873-PA | 399..536 | 1..138 | 662 | 93.5 | Plus |
Dsim\GD12873-PA | 720 | GD12873-PA | 3..382 | 47..427 | 539 | 35.5 | Plus |
Dsim\GD19089-PA | 491 | GD19089-PA | 11..489 | 31..517 | 453 | 27.8 | Plus |
Dsim\GD19091-PA | 500 | GD19091-PA | 49..493 | 69..512 | 421 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11716-PA | 562 | GJ11716-PA | 2..561 | 3..518 | 1238 | 47 | Plus |
Dvir\GJ11715-PA | 485 | GJ11715-PA | 35..485 | 68..518 | 728 | 37 | Plus |
Dvir\GJ11717-PA | 544 | GJ11717-PA | 118..543 | 87..513 | 640 | 36.6 | Plus |
Dvir\GJ23724-PA | 493 | GJ23724-PA | 10..486 | 48..512 | 436 | 30 | Plus |
Dvir\GJ23723-PA | 473 | GJ23723-PA | 29..466 | 74..512 | 395 | 28 | Plus |
Dvir\GJ11717-PA | 544 | GJ11717-PA | 2..105 | 79..182 | 275 | 55.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24096-PA | 536 | GK24096-PA | 86..529 | 61..511 | 1251 | 55 | Plus |
Dwil\GK24100-PA | 477 | GK24100-PA | 9..464 | 67..514 | 738 | 37.8 | Plus |
Dwil\GK24094-PA | 484 | GK24094-PA | 16..484 | 42..518 | 727 | 34.5 | Plus |
Dwil\GK21730-PA | 532 | GK21730-PA | 83..525 | 71..512 | 383 | 27.5 | Plus |
Dwil\GK13773-PA | 495 | GK13773-PA | 56..488 | 72..512 | 326 | 27.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20283-PA | 925 | GE20283-PA | 417..925 | 14..518 | 2143 | 83.7 | Plus |
Dyak\GE20284-PA | 573 | GE20284-PA | 1..573 | 1..518 | 1468 | 52 | Plus |
Dyak\GE20283-PA | 925 | GE20283-PA | 33..388 | 72..427 | 494 | 35.2 | Plus |
Dyak\GE20285-PA | 575 | GE20285-PA | 2..283 | 27..309 | 475 | 37.3 | Plus |
Dyak\GE24387-PA | 490 | GE24387-PA | 11..488 | 31..517 | 435 | 27.6 | Plus |
Dyak\GE24390-PA | 501 | GE24390-PA | 50..494 | 69..512 | 417 | 28.4 | Plus |
Dyak\GE20285-PA | 575 | GE20285-PA | 298..571 | 245..514 | 350 | 31.8 | Plus |
Translation from 79 to 1635
> GH19118.hyp MQNDKYPAPIGFYPPQGQPGYPQPASQPGYPQPGQPQHITPAETYGPQPP PMPPRDPHTRVDPPGGCFQRNQKNKPQSNAVGAAGLIFISGGMNIAWAIG FQGPIYYQTTKHNYIAWFIGAIIGALVTMALTNKVAKKYILQFSSVLVTV GGLVIACTHNNGAGTTAACYLDGIANGLVFAPFMALVGEISVPYLRGKAS ATLEQLCFGTGILLQILYVSNWTYSSYMTYNDFTSENMKGVLSTIYGVLA LIMGSFFTIESPVLMLANNEEQAAIDALRRLQKPAVLTEETYELLAEHKR YLAYNKNMSKSESISKALPTFMRLAYLRALNAMSISSFVIITYVVAILVS NDLRNASSWYIGLAFCRWLGSLIPSFCMESLGRKKPAVFGLLVSCGLSFA VGSQYNVYTYMSQVTVLIMIFEFFAGMAFSSNSAYLTEAYPMGVKQHFIG LTFITEIFVFLIINVCDFNFGQGYNYFYIMGAMYLAGVILGVLTLPETRR MTLQGAQEQFNKFVNFRF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42825-PA | 518 | CG6640-PB | 1..518 | 1..518 | 2711 | 100 | Plus |
CG32054-PA | 563 | CG32054-PA | 1..563 | 1..518 | 1514 | 53.3 | Plus |
CG32053-PA | 496 | CG32053-PA | 45..492 | 67..514 | 783 | 39 | Plus |
CG42826-PA | 473 | CG42826-PA | 8..473 | 53..518 | 699 | 34.4 | Plus |
CG17930-PA | 502 | CG17930-PA | 10..495 | 22..512 | 461 | 29.2 | Plus |