BDGP Sequence Production Resources |
Search the DGRC for GH19261
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 192 |
Well: | 61 |
Vector: | pOT2 |
Associated Gene/Transcript | rush-RA |
Protein status: | GH19261.pep: gold |
Sequenced Size: | 2708 |
Gene | Date | Evidence |
---|---|---|
CG11875 | 2002-01-01 | Sim4 clustering to Release 2 |
CG14782 | 2002-05-18 | Blastp of sequenced clone |
CG14782 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11875 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14782 | 2008-04-29 | Release 5.5 accounting |
CG14782 | 2008-08-15 | Release 5.9 accounting |
RpS27 | 2008-08-15 | Release 5.9 accounting |
RpS27 | 2008-12-18 | 5.12 accounting |
CG14782 | 2008-12-18 | 5.12 accounting |
2708 bp (2708 high quality bases) assembled on 2002-05-18
GenBank Submission: BT003610
> GH19261.complete AGAGCCTATGAAACATTCTTTATTGTTGTGAAGTTAATCAATGGTTAGAT CTAAGCATAACTAGTGAAAAATTCCTGAAGTTTTGCCGCACAAGGGTATT TGCACACACAAGAGCTTCCATTATGGGCGGTTTCTTATCGGGGAACCCCA GCGATTGAGCTCCACTATCTATCCTGTTGGCAATTATCCACTTTCTATAA ACAAATACGACAAGAACTGTTTTTTTTTTCACTTAGCCGACCACAACATC GTTAATTCTTTAATTCACAAAGCACAATGAACCAAAGGACCGCAGCAATT GAATTACAAGCTTTCTCTCGTATGGGTTCTGTGGTTTCTTTACGTTTTAG AGTTTTTATTAAAAAATTAATAATTTGTGGTTCATCGCGAGTCCCATTTT ACTGTGGCTTCCTGCGGAAGGAGCAGCCTTCTGTCAGCTTGGCGCGTCCT CCAGTCGGCTGGCACAAAATGGTAGCGCATCCAGCGCAGACCACGACGCC TTGGGCGTGGCTGAAGACGGTGGTGATCCTGTAGCAGCCGGGGCACTTCA CGTCCATGAAGTACGAGTTGGGGTGCTGGACCAGGCGCTTCAGCTTGTGC TTGCGCTTCTCCTCGGCGGGCAGAGGGTGCAGAAGATCTTTTGCTAGCGG CATGTTTTTTGCCAGCCCCAAAACCTCTCCTGTGCCCAAACACGAGACCC AAATTCAAGGGCCGTACGGCAACTATCCAAGAACGCCCCAGTTCTCCAGT GCAGCAGCCCCAGGTCGGGAATCCGACGCTCGACAAACAATAACACGGGC GGTGGGCAGAGCGAGACGGAGCGAGCTCAGTTTGTTTTTGTTGCTGTGGT GTGAGTGAGTCATGACGTTTCGGACGGCGTAGAAAAGCCAGTTACAGTCA ACCGTCGAACATTGCATAAAGCGGGAGCTGTTGCCCTGCATTCCGGAACC AGGATCCGCCAGTCGCCCCACTTCCTCACCGTTTGCCAGGACCTGCAACA GCTGCGCCCAGTCCGCACACACCGAAGCACGCACGTACACACACACACAC ATTTCTGGAGGAGCTGTGGCACCGAGTGTCACACCATACACACACGGCGC GAGCGCACGCACACCACTGCAGCAGGCAGTCTGTCGTCACAGTTGGCTAC ATTTCGACTCGGATTCGGACTCGGATCGAGCTAGCTGAGCAGCAACTTTC GCCGCACTCGAATCGAAGTTAAGCCCAAACCAAAAGCAAAAGCCAAACCC AAGCCGAGCCCAAGCGCCTATTATCGTCATGGTGGACCGTCTGGTCAACT CGGAGGCCAACACGCGCCGCATCGCCTCCGTGGAGAACTGCTTCGGGAGC TCGGGCGTGCCGCTGGCGATGCAAGGTCGCGTTCTGGTGGGCGAGGGCGT GCTGACCAAGATGTGTCGCAAGCGGCCCAAGTCGCGCCAGTTCTTCCTGT TCAACGACATCCTGGTGTACGGAAACATAGTGATTGGCAAGAAGAAGTAC AACAAGCAGCATATCATGCCGCTGGAGGAGGTCTCGCTGGAATCGATTGC CGACAACCAGACGTACAGAAACGGCTGGTACATCCGCACCACCACCAAGT CGTTTGTGGTGTTTGCGGCCACCAGCACCGAGAAGCAGGAGTGGATGGCT CACATCAACAAGTGCGTGGAGGACCTGCTGCGCAAGAGCGGCAAGAAGCC GGTGGAGAACCACGCCGCCGTTTGGGTGCCCGACACCGACGCCAGCGTCT GCATGCACTGCAAGAAGACGCAGTTTACTTTCATCCAGCGCCGGCATCAC TGCCGCAACTGCGGCGCTGTTGTCTGCGCCGGCTGCTCGGCCAAGAAGTT CCTGCTTCCGCAGCAGAGCACCAAGGCGTTGCGCGTCTGTGACGCCTGCT ACGAGCGCTTGAAGCACGTGCCAAGTTCCCTTGGCTCTGGCGAGGACTCG GCAGCGGCTACCGGCGCTGCCTCCGGCAACAAGCTCAACACAACAGCCGG CGACAGCTCCAACGATGAGGACTCCGACGAGGAGACTGCCTCCCCTGGTG GCGAGTCGCACGATGAGCCGCGCTTCTACGGGGACAACAGCGTGCTATCC GCCGTCGAAGACTCCTCGACGATAACCTCGCCCTCCTCCGCCACCACTGG CAGCTTGGAGGCTCCCCAGGTGACACCGAGCGTCCAAAGCTCCCCGGCTG CCGTTGCGACGACGGGCAGCCACTGTTGAACGGACCACATAGCGAATGAT TATGATTATGCAAGACGAACAACGGAAGCGATGCGAGCAGGAGGAGATTA AGGAGCTGCGCAAGATGACGGCATTCAAGGCTCGTCCGAATCCATTTAAA TAGTGCTCGACGGAACCAATCGACTACCAAACGTTTGATAGCCCTGTCCA AATTTAAATGAAGTGAAGTCGATGCTACACATAATCGTGTTTACCGATGC ATAGTTTTACCAGATTAACACAATTTTTGTCTCTTAACATTAACATTACT TTTACGCATATATCGTTCCCGTTTTTGGCGGATAAGAACCACTAAAATCG TATGTTTGGCGAGAGGATAAACTATATGGATATGTATACAACATAAGCAA TTTGCAATTGCGATCATTAACTGTTTTCTATTTGTACAAAGCCCAAAAAA CAATAAATTAATACTGTAAATTGAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14782-RA | 2311 | CG14782-RA | 104..2119 | 660..2675 | 10080 | 100 | Plus |
RpS27-RA | 980 | RpS27-RA | 168..827 | 660..1 | 3300 | 100 | Minus |
RpS27.a | 703 | RpS27.a | 288..700 | 413..1 | 2065 | 100 | Minus |
RpS27.a | 703 | RpS27.a | 57..290 | 660..427 | 1170 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 1372515..1374115 | 660..2260 | 7945 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 21069039..21069467 | 1..429 | 2145 | 100 | Plus |
chrX | 22417052 | chrX | 1374902..1375315 | 2260..2673 | 2055 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 21069531..21069756 | 427..652 | 1115 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 1478620..1480220 | 660..2260 | 8005 | 100 | Plus |
3R | 32079331 | 3R | 25245955..25246383 | 1..429 | 2145 | 100 | Plus |
X | 23542271 | X | 1481007..1481422 | 2260..2675 | 2080 | 100 | Plus |
3R | 32079331 | 3R | 25246447..25246672 | 427..652 | 1115 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 1486718..1488318 | 660..2260 | 8005 | 100 | Plus |
3R | 31820162 | 3R | 24986786..24987214 | 1..429 | 2145 | 100 | Plus |
X | 23527363 | X | 1489105..1489520 | 2260..2675 | 2080 | 100 | Plus |
3R | 31820162 | 3R | 24987278..24987503 | 427..652 | 1115 | 99.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 1372505..1374115 | 651..2260 | 99 | -> | Plus |
chrX | 1374903..1375315 | 2261..2673 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14782-RA | 1..951 | 1279..2229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14782-RA | 1..951 | 1279..2229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rush-RA | 1..951 | 1279..2229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14782-RA | 1..951 | 1279..2229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rush-RA | 1..951 | 1279..2229 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14782-RA | 59..2082 | 651..2673 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14782-RA | 59..2082 | 651..2673 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rush-RA | 59..2082 | 651..2673 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14782-RA | 59..2082 | 651..2673 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rush-RA | 59..2082 | 651..2673 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1478610..1480220 | 651..2260 | 99 | -> | Plus |
X | 1481008..1481420 | 2261..2673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1478610..1480220 | 651..2260 | 99 | -> | Plus |
X | 1481008..1481420 | 2261..2673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1478610..1480220 | 651..2260 | 99 | -> | Plus |
X | 1481008..1481420 | 2261..2673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 1372643..1374253 | 651..2260 | 99 | -> | Plus |
arm_X | 1375041..1375453 | 2261..2673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1486708..1488318 | 651..2260 | 99 | -> | Plus |
X | 1489106..1489518 | 2261..2673 | 100 | Plus |
Translation from 1278 to 2228
> GH19261.pep MVDRLVNSEANTRRIASVENCFGSSGVPLAMQGRVLVGEGVLTKMCRKRP KSRQFFLFNDILVYGNIVIGKKKYNKQHIMPLEEVSLESIADNQTYRNGW YIRTTTKSFVVFAATSTEKQEWMAHINKCVEDLLRKSGKKPVENHAAVWV PDTDASVCMHCKKTQFTFIQRRHHCRNCGAVVCAGCSAKKFLLPQQSTKA LRVCDACYERLKHVPSSLGSGEDSAAATGAASGNKLNTTAGDSSNDEDSD EETASPGGESHDEPRFYGDNSVLSAVEDSSTITSPSSATTGSLEAPQVTP SVQSSPAAVATTGSHC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20914-PA | 325 | GF20914-PA | 1..278 | 1..280 | 1421 | 93.9 | Plus |
Dana\GF22946-PA | 985 | GF22946-PA | 901..962 | 149..210 | 180 | 54 | Plus |
Dana\GF12817-PA | 1347 | GF12817-PA | 533..592 | 148..208 | 177 | 49.2 | Plus |
Dana\GF13888-PA | 763 | GF13888-PA | 160..227 | 154..221 | 165 | 44.9 | Plus |
Dana\GF18724-PA | 228 | GF18724-PA | 163..226 | 147..208 | 146 | 41.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12863-PA | 327 | GG12863-PA | 1..297 | 1..297 | 1589 | 98.7 | Plus |
Dere\GG12136-PA | 981 | GG12136-PA | 898..966 | 149..219 | 180 | 50 | Plus |
Dere\GG22114-PA | 1349 | GG22114-PA | 534..612 | 148..230 | 178 | 41 | Plus |
Dere\GG24878-PA | 762 | GG24878-PA | 160..225 | 154..221 | 164 | 49.3 | Plus |
Dere\GG12131-PA | 226 | GG12131-PA | 161..223 | 148..208 | 147 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17951-PA | 321 | GH17951-PA | 1..315 | 1..305 | 1186 | 75.2 | Plus |
Dgri\GH18624-PA | 1115 | GH18624-PA | 1022..1083 | 149..210 | 180 | 52.4 | Plus |
Dgri\GH21833-PA | 1483 | GH21833-PA | 635..694 | 148..208 | 171 | 45.9 | Plus |
Dgri\GH11165-PA | 738 | GH11165-PA | 160..242 | 154..239 | 164 | 39.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
rush-PB | 316 | CG14782-PB | 1..316 | 1..316 | 1655 | 100 | Plus |
rush-PA | 316 | CG14782-PA | 1..316 | 1..316 | 1655 | 100 | Plus |
CG6051-PD | 988 | CG6051-PD | 905..973 | 149..219 | 171 | 50 | Plus |
CG6051-PC | 989 | CG6051-PC | 906..974 | 149..219 | 171 | 50 | Plus |
CG6051-PB | 989 | CG6051-PB | 906..974 | 149..219 | 171 | 50 | Plus |
Sara-PA | 1343 | CG15667-PA | 527..606 | 148..231 | 170 | 41.7 | Plus |
Hrs-PA | 647 | CG2903-PA | 47..179 | 154..308 | 166 | 29.9 | Plus |
Hrs-PC | 760 | CG2903-PC | 160..292 | 154..308 | 166 | 29.9 | Plus |
Hrs-PB | 760 | CG2903-PB | 160..292 | 154..308 | 166 | 29.9 | Plus |
CG5270-PB | 2243 | CG5270-PB | 1441..1500 | 149..207 | 158 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16489-PA | 328 | GI16489-PA | 1..272 | 1..280 | 1225 | 81.2 | Plus |
Dmoj\GI24295-PA | 1051 | GI24295-PA | 962..1043 | 149..232 | 182 | 47.1 | Plus |
Dmoj\GI19076-PA | 1347 | GI19076-PA | 519..601 | 148..231 | 171 | 39.3 | Plus |
Dmoj\GI17877-PA | 750 | GI17877-PA | 160..231 | 154..225 | 161 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14261-PA | 310 | GL14261-PA | 1..310 | 1..316 | 1335 | 81 | Plus |
Dper\GL23610-PA | 1009 | GL23610-PA | 914..975 | 149..210 | 177 | 54 | Plus |
Dper\GL16978-PA | 1352 | GL16978-PA | 537..615 | 148..227 | 175 | 42.5 | Plus |
Dper\GL26577-PA | 765 | GL26577-PA | 159..214 | 153..208 | 162 | 49.1 | Plus |
Dper\GL23056-PA | 260 | GL23056-PA | 195..257 | 148..208 | 149 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13242-PA | 310 | GA13242-PA | 1..310 | 1..316 | 1330 | 80.7 | Plus |
Dpse\GA19323-PB | 1007 | GA19323-PB | 912..980 | 149..217 | 182 | 52.9 | Plus |
Dpse\GA13882-PB | 1310 | GA13882-PB | 495..577 | 148..231 | 177 | 41.7 | Plus |
Dpse\GA15506-PA | 748 | GA15506-PA | 159..217 | 153..211 | 161 | 48.3 | Plus |
Dpse\GA30046-PC | 732 | GA30046-PC | 667..729 | 148..208 | 154 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19146-PA | 316 | GM19146-PA | 1..316 | 1..316 | 1689 | 98.7 | Plus |
Dsec\GM10129-PA | 975 | GM10129-PA | 892..960 | 149..219 | 180 | 50 | Plus |
Dsec\GM15837-PA | 1345 | GM15837-PA | 529..608 | 148..231 | 179 | 41.7 | Plus |
Dsec\GM18359-PA | 747 | GM18359-PA | 160..232 | 154..235 | 168 | 45.8 | Plus |
Dsec\GM10123-PA | 284 | GM10123-PA | 219..281 | 148..208 | 147 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18091-PA | 820 | GD18091-PA | 737..805 | 149..219 | 180 | 50 | Plus |
Dsim\GD11597-PA | 1345 | GD11597-PA | 529..608 | 148..231 | 179 | 41.7 | Plus |
Dsim\GD23175-PA | 759 | GD23175-PA | 160..232 | 154..235 | 168 | 45.8 | Plus |
Dsim\GD18085-PA | 493 | GD18085-PA | 428..490 | 148..208 | 150 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16034-PA | 298 | GJ16034-PA | 1..277 | 1..279 | 1286 | 84.2 | Plus |
Dvir\GJ23073-PA | 1052 | GJ23073-PA | 969..1052 | 149..234 | 182 | 46 | Plus |
Dvir\GJ20050-PA | 1344 | GJ20050-PA | 528..587 | 148..208 | 170 | 45.9 | Plus |
Dvir\GJ17377-PA | 734 | GJ17377-PA | 160..218 | 154..212 | 160 | 48.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16096-PA | 330 | GK16096-PA | 1..285 | 1..280 | 1297 | 83 | Plus |
Dwil\GK22512-PA | 993 | GK22512-PA | 902..963 | 149..210 | 180 | 54 | Plus |
Dwil\GK20901-PA | 1323 | GK20901-PA | 497..556 | 148..208 | 172 | 47.5 | Plus |
Dwil\GK24576-PA | 738 | GK24576-PA | 160..218 | 154..212 | 163 | 48.3 | Plus |
Dwil\GK22600-PA | 219 | GK22600-PA | 154..216 | 148..208 | 147 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16694-PA | 316 | GE16694-PA | 1..316 | 1..316 | 1674 | 98.1 | Plus |
Dyak\GE12197-PA | 1348 | GE12197-PA | 532..611 | 148..231 | 180 | 41.7 | Plus |
Dyak\GE10583-PA | 984 | GE10583-PA | 901..969 | 149..219 | 180 | 50 | Plus |
Dyak\GE18175-PA | 765 | GE18175-PA | 160..231 | 154..230 | 170 | 48.7 | Plus |
Translation from 1278 to 2228
> GH19261.hyp MVDRLVNSEANTRRIASVENCFGSSGVPLAMQGRVLVGEGVLTKMCRKRP KSRQFFLFNDILVYGNIVIGKKKYNKQHIMPLEEVSLESIADNQTYRNGW YIRTTTKSFVVFAATSTEKQEWMAHINKCVEDLLRKSGKKPVENHAAVWV PDTDASVCMHCKKTQFTFIQRRHHCRNCGAVVCAGCSAKKFLLPQQSTKA LRVCDACYERLKHVPSSLGSGEDSAAATGAASGNKLNTTAGDSSNDEDSD EETASPGGESHDEPRFYGDNSVLSAVEDSSTITSPSSATTGSLEAPQVTP SVQSSPAAVATTGSHC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
rush-PB | 316 | CG14782-PB | 1..316 | 1..316 | 1655 | 100 | Plus |
rush-PA | 316 | CG14782-PA | 1..316 | 1..316 | 1655 | 100 | Plus |
CG6051-PD | 988 | CG6051-PD | 905..973 | 149..219 | 171 | 50 | Plus |
CG6051-PC | 989 | CG6051-PC | 906..974 | 149..219 | 171 | 50 | Plus |
CG6051-PB | 989 | CG6051-PB | 906..974 | 149..219 | 171 | 50 | Plus |