BDGP Sequence Production Resources |
Search the DGRC for GH19412
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 194 |
Well: | 12 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4300-RA |
Protein status: | GH19412.pep: gold |
Sequenced Size: | 1987 |
Gene | Date | Evidence |
---|---|---|
CG4300 | 2002-11-11 | Blastp of sequenced clone |
CG4300 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4300 | 2008-04-29 | Release 5.5 accounting |
CG4300 | 2008-08-15 | Release 5.9 accounting |
CG4300 | 2008-12-18 | 5.12 accounting |
1987 bp (1987 high quality bases) assembled on 2002-11-11
GenBank Submission: BT001432
> GH19412.complete TCGGTACGCGGTTCAGCGTTTTTGTTCAACGGATTAGCGCAAGTTAAGCA CGATGGCGGCCCAGACGATACTGTTTGATTTCACGCTGGACAAGGACAAG ACGGCGGATGAGGAGGCGCGCCTCCAGGTGGCCAAAATCCTGCGTAACGA GCTGGAGCAGCTGTTCCCCCAGCTGGAGCTGGCCTACTCGATGGAGTCGC CGGAAAACGGCTACTTTGCGGTGCTGCACGAGAACAAGGACACGGTGATT ACCTGCCGCATCTTCCAGCACGGCCTGCTGACGCTCAACGTGGAGTACTT CCTGCCCGATGGCAAGGAGCCGAGCATATCCTTCGACACCATGCGCACCA TGGAACTGATTTTGCGGCAGAAATTTGATTCCGATCGGTCCAAGTACTTG CCGCCGATTAAACGCGGCGGATATATCGACATATATATGACTAGCTCAGA TGAGCGCATCATCGAGTACGACATCGACAAGGTGGTCTTCGAGGCGCGCT CGCCCTTCCAGAAGATTCAAATCATGCACTCCAAGACCCTGGGCAACATG CTGCTCCTCGACGAGCTGCAGAACATTGCTGAATCCGATTTGATTTACAC GGAGACCCTGATGTGTCGCGGCGTGGAGAACTACGAGGGCAAGGAGATCT GCATCCTGGGCGGCGGTGATGGCGCCTTGTTGTACGAGCTACTCAAGGAG AATCCGAAGCATGTGGTGATGCTGGAGATCGATGAGCTTGTGATGCAAAC CTGCAACAAATACCTCAACGTGATCTGCGGCGATGTGCTGGAGAAACGCA AGGGCGATCAGTACGAGATCATTGTGGGCGACTGTGTGGAGTACTTGAAG AAGTTCATCGCCGAGGGCCGCAAGTTCGACTACGTTTTTGGGGATCTTAC GGACATACCCATAACCGATGCCCCGGAGGGCGAGACCTGGGATTTCATTC GTACCATCTTCGAGCACTCCTTCAAGGTGCTGAAACCCGACGGAAAGTAT TTGACTCATGGCAATGGGTCCACCTGCAAGGTGCAGCTGCGTCTATTCGA GGAGCAGTTGAATTTGCTGCGTCCCAAGGTGAAGTTCACCACCACCAAGG CGTTTGTGCCGTCGTTCATGGAAGAGTGGCTCTTCTACCAAGTGACTTTC GCCTGACAAGCTCAGGTGGACTCCTCAGCAGCAGCAGTAGCTACTTCTAG CGCACCACCAACCGCCAGTCACACACCAGCATCACACAGCATAAGTCAGG AACCGGGAACCGTCGGAGAGATGCTCCAGCTGCACTCCTACACTGTCACT ATCCATGGAGCAGCAGTCGGAGTTCAGGAGGAGGAAAATATGAATAATGG AGCCGTGGGTCAATTGAAACCGCGACCAAGGCGTCGAAAGAAGAAGCGTG TACACTACCATCACACGCTGGTTTCTTAGTCCAGGAAACACGGAATCCGA TGCACAAGCTAATCGCCATCATCGAAACCATCGCAACAAAACCCAAGACA GAGGAAAACACGCACTTCCAATGGCTGTTACTTACAATTGAAAACCAAAC CAAATACTGAACCCAATTCGTTTACGCTTAAGTTAGGCTTTAGTTCCGTT TCTCGTTCACTGATTTCAATGCTAAAAACTAAGACAAAAGTACAACCTTT AAGCAAGGACAGGCTAAAATAATAACTTATGTATTCGTGTTTATTTGAAT TACGCCTAAGCATAGCATGTTGGCCAACTATTTGTAATATTTCGTATAAC GTGTACATCTATATAATGTAGACCATATGTTTAGTTATCCATTAACAAGC AAAGTGGAGCGGGGAAGGCCCAAGGATCGAGGATGTGTGTATGTGGGTGT GAGGAAGCGTAGCAGGAACACCAACTTTTATTGCTGTAATAACGATTAAT ACCAAACATTTTAAACGGGAGAACTAATAAAGTTAAATAAATAGTCGTAC GCAGAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4300-RA | 2083 | CG4300-RA | 76..2036 | 1..1961 | 9805 | 100 | Plus |
CG4300-RB | 2080 | CG4300-RB | 518..2033 | 446..1961 | 7580 | 100 | Plus |
CG4300.a | 1929 | CG4300.a | 494..1882 | 573..1961 | 6945 | 100 | Plus |
CG4300-RB | 2080 | CG4300-RB | 76..413 | 1..338 | 1690 | 100 | Plus |
CG4300.a | 1929 | CG4300.a | 48..385 | 1..338 | 1690 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 12262308..12263693 | 1958..573 | 6840 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 12267542..12267878 | 337..1 | 1655 | 99.4 | Minus |
chr3L | 24539361 | chr3L | 12264149..12264272 | 570..447 | 590 | 98.4 | Minus |
chr3L | 24539361 | chr3L | 12265726..12265837 | 449..338 | 560 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 12271653..12273041 | 1961..573 | 6945 | 100 | Minus |
3L | 28110227 | 3L | 12276890..12277226 | 337..1 | 1685 | 100 | Minus |
3L | 28110227 | 3L | 12273498..12273623 | 572..447 | 630 | 100 | Minus |
3L | 28110227 | 3L | 12275076..12275187 | 449..338 | 560 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 12264753..12266141 | 1961..573 | 6945 | 100 | Minus |
3L | 28103327 | 3L | 12269990..12270326 | 337..1 | 1685 | 100 | Minus |
3L | 28103327 | 3L | 12266598..12266723 | 572..447 | 630 | 100 | Minus |
3L | 28103327 | 3L | 12268176..12268287 | 449..338 | 560 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2349..2424 | 1176..1253 | 123 | 72 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 12262308..12263693 | 573..1958 | 99 | <- | Minus |
chr3L | 12264147..12264269 | 450..572 | 97 | <- | Minus |
chr3L | 12265726..12265837 | 338..449 | 100 | <- | Minus |
chr3L | 12267542..12267878 | 1..337 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RA | 1..1104 | 53..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RA | 1..1104 | 53..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RA | 1..1104 | 53..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RA | 1..1104 | 53..1156 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RD | 1..1377 | 53..1429 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RA | 41..1998 | 1..1958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RA | 41..1998 | 1..1958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RA | 26..1983 | 1..1958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RA | 41..1998 | 1..1958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4300-RA | 26..1983 | 1..1958 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12273498..12273620 | 450..572 | 100 | <- | Minus |
3L | 12275076..12275187 | 338..449 | 100 | <- | Minus |
3L | 12276890..12277226 | 1..337 | 100 | Minus | |
3L | 12271656..12273041 | 573..1958 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12273498..12273620 | 450..572 | 100 | <- | Minus |
3L | 12275076..12275187 | 338..449 | 100 | <- | Minus |
3L | 12276890..12277226 | 1..337 | 100 | Minus | |
3L | 12271656..12273041 | 573..1958 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12273498..12273620 | 450..572 | 100 | <- | Minus |
3L | 12275076..12275187 | 338..449 | 100 | <- | Minus |
3L | 12276890..12277226 | 1..337 | 100 | Minus | |
3L | 12271656..12273041 | 573..1958 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 12264756..12266141 | 573..1958 | 100 | <- | Minus |
arm_3L | 12266598..12266720 | 450..572 | 100 | <- | Minus |
arm_3L | 12268176..12268287 | 338..449 | 100 | <- | Minus |
arm_3L | 12269990..12270326 | 1..337 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 12264756..12266141 | 573..1958 | 100 | <- | Minus |
3L | 12266598..12266720 | 450..572 | 100 | <- | Minus |
3L | 12268176..12268287 | 338..449 | 100 | <- | Minus |
3L | 12269990..12270326 | 1..337 | 100 | Minus |
Translation from 52 to 1155
> GH19412.hyp MAAQTILFDFTLDKDKTADEEARLQVAKILRNELEQLFPQLELAYSMESP ENGYFAVLHENKDTVITCRIFQHGLLTLNVEYFLPDGKEPSISFDTMRTM ELILRQKFDSDRSKYLPPIKRGGYIDIYMTSSDERIIEYDIDKVVFEARS PFQKIQIMHSKTLGNMLLLDELQNIAESDLIYTETLMCRGVENYEGKEIC ILGGGDGALLYELLKENPKHVVMLEIDELVMQTCNKYLNVICGDVLEKRK GDQYEIIVGDCVEYLKKFIAEGRKFDYVFGDLTDIPITDAPEGETWDFIR TIFEHSFKVLKPDGKYLTHGNGSTCKVQLRLFEEQLNLLRPKVKFTTTKA FVPSFMEEWLFYQVTFA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4300-PA | 367 | CG4300-PA | 1..367 | 1..367 | 1915 | 100 | Plus |
CG4300-PD | 458 | CG4300-PD | 1..367 | 1..367 | 1915 | 100 | Plus |
CG4300-PB | 366 | CG4300-PB | 1..366 | 1..367 | 1766 | 92.9 | Plus |
CG4300-PC | 457 | CG4300-PC | 1..366 | 1..367 | 1766 | 92.9 | Plus |
SpdS-PC | 287 | CG8327-PC | 26..196 | 141..320 | 156 | 30.5 | Plus |
Translation from 52 to 1155
> GH19412.pep MAAQTILFDFTLDKDKTADEEARLQVAKILRNELEQLFPQLELAYSMESP ENGYFAVLHENKDTVITCRIFQHGLLTLNVEYFLPDGKEPSISFDTMRTM ELILRQKFDSDRSKYLPPIKRGGYIDIYMTSSDERIIEYDIDKVVFEARS PFQKIQIMHSKTLGNMLLLDELQNIAESDLIYTETLMCRGVENYEGKEIC ILGGGDGALLYELLKENPKHVVMLEIDELVMQTCNKYLNVICGDVLEKRK GDQYEIIVGDCVEYLKKFIAEGRKFDYVFGDLTDIPITDAPEGETWDFIR TIFEHSFKVLKPDGKYLTHGNGSTCKVQLRLFEEQLNLLRPKVKFTTTKA FVPSFMEEWLFYQVTFA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24990-PA | 367 | GF24990-PA | 1..367 | 1..367 | 1820 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13840-PA | 367 | GG13840-PA | 1..367 | 1..367 | 1923 | 98.6 | Plus |
Dere\GG16982-PA | 287 | GG16982-PA | 26..197 | 141..321 | 149 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16076-PA | 367 | GH16076-PA | 1..367 | 1..367 | 1677 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sms-PD | 458 | CG4300-PD | 1..367 | 1..367 | 1915 | 100 | Plus |
Sms-PA | 367 | CG4300-PA | 1..367 | 1..367 | 1915 | 100 | Plus |
Sms-PC | 457 | CG4300-PC | 1..366 | 1..367 | 1766 | 92.9 | Plus |
Sms-PB | 366 | CG4300-PB | 1..366 | 1..367 | 1766 | 92.9 | Plus |
SpdS-PC | 287 | CG8327-PC | 26..196 | 141..320 | 156 | 30.5 | Plus |
SpdS-PA | 287 | CG8327-PA | 26..196 | 141..320 | 156 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12338-PA | 454 | GI12338-PA | 1..363 | 1..363 | 1677 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25003-PA | 367 | GL25003-PA | 1..367 | 1..367 | 1749 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18092-PA | 367 | GA18092-PA | 1..367 | 1..367 | 1749 | 88 | Plus |
Dpse\GA18092-PB | 369 | GA18092-PB | 1..369 | 1..367 | 1586 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24668-PA | 367 | GM24668-PA | 1..367 | 1..367 | 1946 | 99.5 | Plus |
Dsec\GM23823-PA | 287 | GM23823-PA | 26..197 | 141..321 | 151 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12732-PA | 420 | GD12732-PA | 1..420 | 1..367 | 1886 | 87.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12230-PA | 367 | GJ12230-PA | 1..367 | 1..367 | 1714 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12827-PA | 433 | GK12827-PA | 1..315 | 1..315 | 1527 | 89.5 | Plus |