BDGP Sequence Production Resources |
Search the DGRC for GH19483
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 194 |
Well: | 83 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9581-RA |
Protein status: | GH19483.pep: gold |
Preliminary Size: | 2003 |
Sequenced Size: | 1900 |
Gene | Date | Evidence |
---|---|---|
CG9581 | 2001-01-01 | Release 2 assignment |
CG9581 | 2001-11-08 | Blastp of sequenced clone |
CG9581 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9581 | 2008-04-29 | Release 5.5 accounting |
CG9581 | 2008-08-15 | Release 5.9 accounting |
CG9581 | 2008-12-18 | 5.12 accounting |
1900 bp (1900 high quality bases) assembled on 2001-11-08
GenBank Submission: AY069164
> GH19483.complete TTAAGCAATCGTCTGGCAACCCATGTGTTTTGTTTTTATCCAGGATCGTT AGTGTTTTTAACAGTTCCGTTTTCTGATGTGTATAATATTGTGAAGATTT TAGTTGGCAACCCAAGAACCGGAACCGGCAGCACGATGAATATCCTAAGG CGCCTGGACCGCCTGATCGCTCCCACCGTCCGCCGCAGCGCCGCCATTTC CACCAGCCTGTGGCCACACCGCTGGATGAGCCAGTCCACCACGATCTCCC CAGGAAGTCCCAGCAGCAAATCGACAGTAAACGCGGCCGAGGTGCGTGGC GTGGCTCAGATTCTGCGCCAGCAAAAGGGAAACCTGGGACAGCCCACCAG CGTCTCGCATCCACATCTTATCCAGCCGGACGAGCTGGTTCCGGGCGTGG AGCTGACCGAGATCAAGGAACGCCGTTCGCAGCTGATGCAAAACATCCGC GCCTATGCACGCAGTTTCGGCGGCGAGTTCAATGGGCACTCGAGTTCTTG TCACATGCTCGTTCTGGGCGCCGCCTCCAAGAAGTATATGAGCGGCAAGA TCCCGTACGTGTTCCGCCAGAACTCGGACTTCTACTACCTAACTGGCTGC CTAGAGCCGGACGCCGTGCTACTGCTGACCATCGACGAGGCCCAGAACGT GCAGTCCGAGCTGTTTATGCGTCCCAAGGACCCGCATGCCGAGCTGTGGG ATGGTCCGCGCACTGGGCCCGAGCTCGCGGTGCCGCTTTTCGGAGTCACT GAGGCCCATCCGCTGTCCCAGCTGGAGGCGGTGCTGGCCAAGCGCGCAGG CGCCCTAAAACCACACATCTGGTTCGATCAGAAGAGCACCGACCTGCCGT CCCTGGCGGAGAACATGCTGCGATTGAGCGGCAATCAGCAGCGTCCGCTG CTGCCGGCCTACACTTTCCTAGAAGCCATGCGCCTGCTTAAGTCCCGCGA CGAGATGCAGTTAATGCGGCGCACCTGCGACATAGCCTCACGCTCGTTCA ACGAAGTGATGGCCGAGACCCGGCCAGGTCAGTCGGAGCACCATCTGTTC GCCGCGATTGACTACAAGTGCCGCATGCGCAACGCCAGCTACCTGGCCTA CCCGCCGGTGGTGGCTGCCGGTAAAAACGCCACGGTGATCCACTACGTGG CCAACAGCCAGTTGTTGGGTCAGCAGGATCTCGTGCTGATGGACGCCGGC TGCGAGTATGGCGGCTACACCAGCGACATCACACGCACCTGGCCGGCGAG TGGGGTTTTCACGGAGCCGCAGCGCACACTGTACGACATGCTGCACCAGC TGCAGGAGGAGATTATTGGCAACGTGATGAAGCCGGGCGGCGAGACGCTC GACCAGCTGTTCGAGACCACCTGCTACAAGCTGGGCAAGTACTTGCAGGA GATCGGGCTGGTGGGCAAGTCGTTCAGCGAGTACAAGGAACTGGTCAGCC AGGGCTACCGCTTCTGTCCGCACCACGTCTCCCACTACCTTGGGATGGAC GTGCACGACACACCGCACGTGCCACGCAACACACGCATCGTGCCCGGCAT GGTCTTCACCGTTGAGCCGGGCATCTACATTGGCCAGGATTGCGGCGACG TGCCGCCCGAGTTCCGGGGCATCGGCATCCGCATCGAAGACGATCTGCTC ATCAACGAGAACGGCCACGTGGAAGTTCTAACTGAGGCGTGCGTCAAGGA TCCACGCGCCCTGCAGGAGCTTTGCAAACAGCAACAGAAGAACCCCGGTG CCTCATCCGCGGAGGCGTTTTAAGAGCTCACAACGAAAACCAAATTCCTA GTCATAAGCCTTTCATTCTCCCGACAACCTTATGAGCTGATTTGGGTCCT AAAGTAAAGGCAGATGCTGTATTTATAAATGCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9581.b | 2049 | CG9581.b | 168..2049 | 1..1882 | 9410 | 100 | Plus |
CG9581-RA | 1895 | CG9581-RA | 14..1895 | 1..1882 | 9410 | 100 | Plus |
CG9581.a | 1848 | CG9581.a | 70..1848 | 104..1882 | 8895 | 100 | Plus |
CG9581.a | 1848 | CG9581.a | 23..69 | 1..47 | 235 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20056590..20057964 | 508..1882 | 99 | <- | Minus |
chrX | 20058022..20058528 | 1..507 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9581-RA | 1..1638 | 136..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9581-RA | 1..1638 | 136..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9581-RA | 1..1638 | 136..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9581-RA | 1..1638 | 136..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9581-RA | 1..1638 | 136..1773 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9581-RA | 1..1878 | 1..1878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9581-RA | 1..1882 | 1..1882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9581-RA | 2..1883 | 1..1882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9581-RA | 1..1878 | 1..1878 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9581-RA | 2..1883 | 1..1882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20168042..20169416 | 508..1882 | 100 | <- | Minus |
X | 20169474..20169980 | 1..507 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20168042..20169416 | 508..1882 | 100 | <- | Minus |
X | 20169474..20169980 | 1..507 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20168042..20169416 | 508..1882 | 100 | <- | Minus |
X | 20169474..20169980 | 1..507 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20062075..20063449 | 508..1882 | 100 | <- | Minus |
arm_X | 20063507..20064013 | 1..507 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20176140..20177514 | 508..1882 | 100 | <- | Minus |
X | 20177572..20178078 | 1..507 | 100 | Minus |
Translation from 0 to 1772
> GH19483.hyp LSNRLATHVFCFYPGSLVFLTVPFSDVYNIVKILVGNPRTGTGSTMNILR RLDRLIAPTVRRSAAISTSLWPHRWMSQSTTISPGSPSSKSTVNAAEVRG VAQILRQQKGNLGQPTSVSHPHLIQPDELVPGVELTEIKERRSQLMQNIR AYARSFGGEFNGHSSSCHMLVLGAASKKYMSGKIPYVFRQNSDFYYLTGC LEPDAVLLLTIDEAQNVQSELFMRPKDPHAELWDGPRTGPELAVPLFGVT EAHPLSQLEAVLAKRAGALKPHIWFDQKSTDLPSLAENMLRLSGNQQRPL LPAYTFLEAMRLLKSRDEMQLMRRTCDIASRSFNEVMAETRPGQSEHHLF AAIDYKCRMRNASYLAYPPVVAAGKNATVIHYVANSQLLGQQDLVLMDAG CEYGGYTSDITRTWPASGVFTEPQRTLYDMLHQLQEEIIGNVMKPGGETL DQLFETTCYKLGKYLQEIGLVGKSFSEYKELVSQGYRFCPHHVSHYLGMD VHDTPHVPRNTRIVPGMVFTVEPGIYIGQDCGDVPPEFRGIGIRIEDDLL INENGHVEVLTEACVKDPRALQELCKQQQKNPGASSAEAF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9581-PA | 545 | CG9581-PA | 1..545 | 46..590 | 2862 | 100 | Plus |
CG32454-PA | 534 | CG32454-PA | 89..501 | 137..575 | 365 | 28.1 | Plus |
Dip-C-PB | 491 | CG5663-PB | 45..465 | 169..555 | 304 | 27.4 | Plus |
Dip-C-PA | 491 | CG5663-PA | 45..465 | 169..555 | 304 | 27.4 | Plus |
Translation from 135 to 1772
> GH19483.pep MNILRRLDRLIAPTVRRSAAISTSLWPHRWMSQSTTISPGSPSSKSTVNA AEVRGVAQILRQQKGNLGQPTSVSHPHLIQPDELVPGVELTEIKERRSQL MQNIRAYARSFGGEFNGHSSSCHMLVLGAASKKYMSGKIPYVFRQNSDFY YLTGCLEPDAVLLLTIDEAQNVQSELFMRPKDPHAELWDGPRTGPELAVP LFGVTEAHPLSQLEAVLAKRAGALKPHIWFDQKSTDLPSLAENMLRLSGN QQRPLLPAYTFLEAMRLLKSRDEMQLMRRTCDIASRSFNEVMAETRPGQS EHHLFAAIDYKCRMRNASYLAYPPVVAAGKNATVIHYVANSQLLGQQDLV LMDAGCEYGGYTSDITRTWPASGVFTEPQRTLYDMLHQLQEEIIGNVMKP GGETLDQLFETTCYKLGKYLQEIGLVGKSFSEYKELVSQGYRFCPHHVSH YLGMDVHDTPHVPRNTRIVPGMVFTVEPGIYIGQDCGDVPPEFRGIGIRI EDDLLINENGHVEVLTEACVKDPRALQELCKQQQKNPGASSAEAF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20449-PA | 543 | GF20449-PA | 51..538 | 48..535 | 2173 | 79.5 | Plus |
Dana\GF17046-PA | 486 | GF17046-PA | 12..479 | 88..529 | 343 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18008-PA | 545 | GG18008-PA | 1..545 | 1..545 | 2701 | 91.2 | Plus |
Dere\GG17129-PA | 491 | GG17129-PA | 45..465 | 124..510 | 310 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12088-PA | 516 | GH12088-PA | 40..516 | 56..531 | 1823 | 71.3 | Plus |
Dgri\GH17466-PA | 486 | GH17466-PA | 45..479 | 124..529 | 343 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9581-PA | 545 | CG9581-PA | 1..545 | 1..545 | 2862 | 100 | Plus |
CG32454-PA | 534 | CG32454-PA | 89..501 | 92..530 | 365 | 28.1 | Plus |
Dip-C-PB | 491 | CG5663-PB | 45..465 | 124..510 | 304 | 27.4 | Plus |
Dip-C-PA | 491 | CG5663-PA | 45..465 | 124..510 | 304 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11096-PA | 489 | GI11096-PA | 3..489 | 45..531 | 1892 | 70.4 | Plus |
Dmoj\GI22790-PA | 486 | GI22790-PA | 39..479 | 120..529 | 338 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12918-PA | 343 | GL12918-PA | 198..327 | 403..532 | 554 | 73.1 | Plus |
Dper\GL12918-PA | 343 | GL12918-PA | 1..175 | 1..181 | 496 | 54.9 | Plus |
Dper\GL27178-PA | 486 | GL27178-PA | 12..479 | 88..529 | 342 | 27.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21891-PA | 542 | GA21891-PA | 1..538 | 1..544 | 1931 | 65.3 | Plus |
Dpse\GA19042-PA | 486 | GA19042-PA | 12..479 | 88..529 | 345 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22688-PA | 262 | GM22688-PA | 1..244 | 1..244 | 1281 | 97.1 | Plus |
Dsec\GM22689-PA | 254 | GM22689-PA | 33..254 | 324..545 | 1179 | 96.8 | Plus |
Dsec\GM26012-PA | 491 | GM26012-PA | 45..465 | 124..510 | 312 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20570-PA | 469 | GD20570-PA | 35..443 | 112..510 | 283 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15780-PA | 518 | GJ15780-PA | 32..518 | 45..531 | 1923 | 72.7 | Plus |
Dvir\GJ22793-PA | 486 | GJ22793-PA | 45..479 | 124..529 | 347 | 27.6 | Plus |