BDGP Sequence Production Resources |
Search the DGRC for GH19567
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 195 |
Well: | 67 |
Vector: | pOT2 |
Associated Gene/Transcript | CG13698-RB |
Protein status: | GH19567.pep: gold |
Preliminary Size: | 1717 |
Sequenced Size: | 1706 |
Gene | Date | Evidence |
---|---|---|
CG13698 | 2001-01-01 | Release 2 assignment |
CG13698 | 2001-07-04 | Blastp of sequenced clone |
CG13698 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13698 | 2008-04-29 | Release 5.5 accounting |
CG13698 | 2008-08-15 | Release 5.9 accounting |
CG13698 | 2008-12-18 | 5.12 accounting |
1706 bp (1706 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051547
> GH19567.complete CCGCGCTGGCCGCATTAAAATCCGAGCTACGGAACTTCGCTGTTTCGCCT CTTGTACGTGGGCTAACTTAAAACAAAAGTGGCTTGCGCAGCCGGCGCGC CTTGAAAGTGTGTGTGTGTTCGTGTTTAAAAAAATAGTGTGCGTTATTGA AAAGCTAAGTCAGTTAGAAGCAGTGTGGAAAGTGCATATTGTATATATCT CTTGCCAAGGCTAAAAGTGTTAAAAGTTAACTCCCAGAAATGCACACACG CATACCGATGCAAGCGAAAAGTTAAAGCGACGATCATTCATTACTGCGTC TTCTTCTTATTCATCTGCTCTTTGCGACGTGTTTCGCTTACCTGTCCAAA AAGCCCGAGTATTGGTGGGCTCCACAGCTCCATAGCTCCCTCTCTCTCTC GCTCTCTTTCGATTTGCACATGCAAAAAGGCAGCAGCAGCAAGAACAACA ACAAAAACTCCATCTGAGAGCTTTAAAGCCGAAGTTCTCGACGCAGACGT CGGCGGGAGCAGAGCTTCAGCAGCGCAGCGGCAGCGAACAACTCGTACAG ATAGGGAAATTCCTTGAGTCATGGACTATAGCAGAAGGAAAATAAGAGAT TCTCTAATTGAAATGGATTCATAAAATCAGTTAAAACTCGTTGGATCTCA ATTGCATTGTTATCGTTATGCTGTACAGTAAAACATGGCAAAGTCGACAC TTTATGCTGCTGGGGTGACCTGTCTGGGCTTTATTTGCTTCGCCTTGGCA TCTGTGGCCATTGGCATACCCATTTGGGGTTACTACGATAGTCCATCGGG CGGCTATGACTTCGATCGAGGTTATTTCGGACCGTTTAAGGTCTGCAAGC AATTGACTTATAATCGCGAGAAATGCGGCAACGACGTGTCCAAGTTTAGA TTAAGTAATGCGGTTTTTGTCAGTGGACTCTTGGCCATTGGCAGCTCAGC TGTGCTGGGCATCTTCTGCATTCTGTCGGTCATTCAACACGCGATGATCT CATCCAGGGAGAAGGTGGTTATGCCCTACACAACTCTAGTGATAGTGAAG TTAATGTTGGCATTGCTGGGAGGTGTACTGGCCATCATAGCGACGGTTTT GTTTGCTCTGCAAATTGATGAGCAGGAGCGCTATGGCTTCAAGATATCGC GGGGCATTTCCTTCTATATACAGATTGTGGCTATTGTTTTGACAATTGCT CTGTTCGTGGCCGCCCTGTACGATGTGATCTACTCGCGCAGTCCAGGCGG AGATCCCACAATGGCGCTGGATGTGTCATCTCCGGGCAGTGCCACTACGT TCAATAATCCTGGTTTCAAGGAGCCTCGCAGTCGCAACGGCGTTTCGGTG ACGGACGCATCCGGTAAGCCCTACAGCGGAATCCGGAATGGAGCGGGAAC GGCGGGCAGCGTGGCCTCCATGAGCACCACCGTGACCAGCGTGTCCAATG GATCCACCCTTGACTCGGTGACTCGTTCACCGCTGCGATCGAGTCTGAAG AAGCCGAGACCACGGCCGGATCCAACGTTAGGCATTCAAAATCCCGGCTA TTCTGGATCCGGAAGCTCGCCACCTATGCGGCGCAATGGAAGCGTGAAGA AGGTCCGAATTCAGACGCACAGCACCGAGGTGTAAGATGGTTTCAACCAA CTAGAATTAAGCCCTTCAACAAGCAGCAAACGACAAAAAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 18095267..18095816 | 550..1 | 2750 | 100 | Minus |
chr3L | 24539361 | chr3L | 18078820..18079334 | 1684..1170 | 2575 | 100 | Minus |
chr3L | 24539361 | chr3L | 18079697..18079864 | 1075..908 | 840 | 100 | Minus |
chr3L | 24539361 | chr3L | 18080135..18080298 | 800..637 | 820 | 100 | Minus |
chr3L | 24539361 | chr3L | 18079967..18080075 | 907..799 | 545 | 100 | Minus |
chr3L | 24539361 | chr3L | 18079534..18079636 | 1173..1071 | 515 | 100 | Minus |
chr3L | 24539361 | chr3L | 18089092..18089180 | 636..548 | 445 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 18105581..18106130 | 550..1 | 2750 | 100 | Minus |
3L | 28110227 | 3L | 18089110..18089646 | 1706..1170 | 2655 | 99.6 | Minus |
3L | 28110227 | 3L | 18090009..18090176 | 1075..908 | 840 | 100 | Minus |
3L | 28110227 | 3L | 18090447..18090610 | 800..637 | 820 | 100 | Minus |
3L | 28110227 | 3L | 18090279..18090387 | 907..799 | 545 | 100 | Minus |
3L | 28110227 | 3L | 18089846..18089948 | 1173..1071 | 515 | 100 | Minus |
3L | 28110227 | 3L | 18099401..18099489 | 636..548 | 445 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 18098681..18099230 | 550..1 | 2750 | 100 | Minus |
3L | 28103327 | 3L | 18082210..18082746 | 1706..1170 | 2655 | 99.6 | Minus |
3L | 28103327 | 3L | 18083109..18083276 | 1075..908 | 840 | 100 | Minus |
3L | 28103327 | 3L | 18083547..18083710 | 800..637 | 820 | 100 | Minus |
3L | 28103327 | 3L | 18083379..18083487 | 907..799 | 545 | 100 | Minus |
3L | 28103327 | 3L | 18082946..18083048 | 1173..1071 | 515 | 100 | Minus |
3L | 28103327 | 3L | 18092501..18092589 | 636..548 | 445 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2402..2527 | 422..549 | 165 | 63.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6742..6874 | 416..554 | 130 | 62.9 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3249..3358 | 380..486 | 127 | 62.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2629..2670 | 426..467 | 120 | 76.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6692..6845 | 390..542 | 117 | 57.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6763..6887 | 416..542 | 114 | 61.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 18079534..18079634 | 1073..1173 | 100 | <- | Minus |
chr3L | 18079700..18079864 | 908..1072 | 100 | <- | Minus |
chr3L | 18079967..18080074 | 800..907 | 100 | <- | Minus |
chr3L | 18080136..18080298 | 637..799 | 100 | <- | Minus |
chr3L | 18089092..18089177 | 551..636 | 100 | <- | Minus |
chr3L | 18078820..18079330 | 1174..1684 | 100 | <- | Minus |
chr3L | 18095267..18095816 | 1..550 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13698-RB | 1..951 | 685..1635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13698-RB | 1..951 | 685..1635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13698-RB | 1..951 | 685..1635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13698-RB | 1..951 | 685..1635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13698-RB | 1..951 | 685..1635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13698-RB | 1..1684 | 1..1684 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13698-RB | 1..1684 | 1..1684 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13698-RB | 20..1703 | 1..1684 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13698-RB | 1..1684 | 1..1684 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13698-RB | 20..1703 | 1..1684 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18089132..18089642 | 1174..1684 | 100 | <- | Minus |
3L | 18089846..18089946 | 1073..1173 | 100 | <- | Minus |
3L | 18090012..18090176 | 908..1072 | 100 | <- | Minus |
3L | 18090279..18090386 | 800..907 | 100 | <- | Minus |
3L | 18090448..18090610 | 637..799 | 100 | <- | Minus |
3L | 18099401..18099486 | 551..636 | 100 | <- | Minus |
3L | 18105581..18106130 | 1..550 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18089132..18089642 | 1174..1684 | 100 | <- | Minus |
3L | 18089846..18089946 | 1073..1173 | 100 | <- | Minus |
3L | 18090012..18090176 | 908..1072 | 100 | <- | Minus |
3L | 18090279..18090386 | 800..907 | 100 | <- | Minus |
3L | 18090448..18090610 | 637..799 | 100 | <- | Minus |
3L | 18099401..18099486 | 551..636 | 100 | <- | Minus |
3L | 18105581..18106130 | 1..550 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18089132..18089642 | 1174..1684 | 100 | <- | Minus |
3L | 18089846..18089946 | 1073..1173 | 100 | <- | Minus |
3L | 18090012..18090176 | 908..1072 | 100 | <- | Minus |
3L | 18090279..18090386 | 800..907 | 100 | <- | Minus |
3L | 18090448..18090610 | 637..799 | 100 | <- | Minus |
3L | 18099401..18099486 | 551..636 | 100 | <- | Minus |
3L | 18105581..18106130 | 1..550 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 18082232..18082742 | 1174..1684 | 100 | <- | Minus |
arm_3L | 18082946..18083046 | 1073..1173 | 100 | <- | Minus |
arm_3L | 18083112..18083276 | 908..1072 | 100 | <- | Minus |
arm_3L | 18083379..18083486 | 800..907 | 100 | <- | Minus |
arm_3L | 18083548..18083710 | 637..799 | 100 | <- | Minus |
arm_3L | 18092501..18092586 | 551..636 | 100 | <- | Minus |
arm_3L | 18098681..18099230 | 1..550 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 18083379..18083486 | 800..907 | 100 | <- | Minus |
3L | 18083548..18083710 | 637..799 | 100 | <- | Minus |
3L | 18092501..18092586 | 551..636 | 100 | <- | Minus |
3L | 18082232..18082742 | 1174..1684 | 100 | <- | Minus |
3L | 18082946..18083046 | 1073..1173 | 100 | <- | Minus |
3L | 18083112..18083276 | 908..1072 | 100 | <- | Minus |
3L | 18098681..18099230 | 1..550 | 100 | Minus |
Translation from 684 to 1634
> GH19567.hyp MAKSTLYAAGVTCLGFICFALASVAIGIPIWGYYDSPSGGYDFDRGYFGP FKVCKQLTYNREKCGNDVSKFRLSNAVFVSGLLAIGSSAVLGIFCILSVI QHAMISSREKVVMPYTTLVIVKLMLALLGGVLAIIATVLFALQIDEQERY GFKISRGISFYIQIVAIVLTIALFVAALYDVIYSRSPGGDPTMALDVSSP GSATTFNNPGFKEPRSRNGVSVTDASGKPYSGIRNGAGTAGSVASMSTTV TSVSNGSTLDSVTRSPLRSSLKKPRPRPDPTLGIQNPGYSGSGSSPPMRR NGSVKKVRIQTHSTEV*
Translation from 684 to 1634
> GH19567.pep MAKSTLYAAGVTCLGFICFALASVAIGIPIWGYYDSPSGGYDFDRGYFGP FKVCKQLTYNREKCGNDVSKFRLSNAVFVSGLLAIGSSAVLGIFCILSVI QHAMISSREKVVMPYTTLVIVKLMLALLGGVLAIIATVLFALQIDEQERY GFKISRGISFYIQIVAIVLTIALFVAALYDVIYSRSPGGDPTMALDVSSP GSATTFNNPGFKEPRSRNGVSVTDASGKPYSGIRNGAGTAGSVASMSTTV TSVSNGSTLDSVTRSPLRSSLKKPRPRPDPTLGIQNPGYSGSGSSPPMRR NGSVKKVRIQTHSTEV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25218-PA | 316 | GF25218-PA | 1..316 | 1..316 | 1605 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15758-PA | 316 | GG15758-PA | 1..316 | 1..316 | 1628 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16711-PA | 317 | GH16711-PA | 1..317 | 1..316 | 1485 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13698-PC | 316 | CG13698-PC | 1..316 | 1..316 | 1602 | 100 | Plus |
CG13698-PB | 316 | CG13698-PB | 1..316 | 1..316 | 1602 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13791-PA | 281 | GI13791-PA | 1..281 | 1..316 | 1327 | 82.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22724-PA | 277 | GL22724-PA | 1..277 | 1..316 | 1358 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12466-PA | 316 | GA12466-PA | 1..316 | 1..316 | 1595 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14955-PA | 316 | GM14955-PA | 1..316 | 1..316 | 1636 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12353-PA | 316 | GD12353-PA | 1..316 | 1..316 | 1637 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11660-PA | 316 | GJ11660-PA | 1..316 | 1..316 | 1502 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16975-PA | 321 | GK16975-PA | 1..321 | 1..316 | 1445 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22090-PA | 316 | GE22090-PA | 1..316 | 1..316 | 1628 | 98.4 | Plus |