BDGP Sequence Production Resources |
Search the DGRC for GH19589
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 195 |
Well: | 89 |
Vector: | pOT2 |
Associated Gene/Transcript | GlyS-RA |
Protein status: | GH19589.pep: gold |
Sequenced Size: | 2582 |
Gene | Date | Evidence |
---|---|---|
CG6904 | 2009-10-22 | Manual selection by Sue Celniker |
2582 bp assembled on 2010-04-28
GenBank Submission: BT124863.1
> GH19589.complete CCTCAACGGAGGGGTACAGCTATAGATCAGCGGCGTCTAGATTATAGCAT CCCGTTCCCAACATATCAAGGAGATGCGCAGACAGCAGTCCTACCGTTTC GAGGACAACGAGTCCACGTCTTACGCTCTGAGGATGAATCGTCGCTTTTC GAGAGTGGAGTCCGGGGCGGACCTTAAGGATTATTTCGATCGGGGTGATA TCGCTTCCCGGGAGAACCGCTGGAACTTCGAGGTGGCATGGGAGGTGGCC AACAAGGTGGGCGGTATTTACACGGTGATCCGGTCGAAGGCATATGTCTC CACCGAGGAGATGGGCGAGCAGTTGTGTATGATGGGTCCCTACAAGGAGC ACTGTGCCCGCACCGAGATGGAGGAGATGGAGTTCCCCAGGGGAAACCCC CTACTAGACGCTGTCAACTCATTGCGCTCGCGAGGCTATAAAATCCACAC CGGTCGCTGGCTGGTGGACGGAAATCCTCAATTAATCCTGTTCGATATTG GATCAGCCGCTTGGAAGCTGGATCAGTTCAAATCGGAGATGTGGGAGAAG TGCCATATTGGAATACCTCATTTGGATATCGAGACGAACGATGCCATTAT CCTTGGCTTTATGATTGCCGAGTTCCTGGAGGAGTTCCGCAACTTTGCCG TGACTTATTCGCAGAACAACGAATTGAGCGCTCCGAGGATTGTCGCCCAC TTCCACGAATGGCAAGCTGGCGTGGGTCTCATTGTCCTACGTACTCGTCT GGTGGAGATCGCCACTGTGTTCACTACCCACGCCACATTGTTGGGTCGTT ACTTGTGCGCCGGCAACACCGATTTCTACAACAATCTGGACAAGTTCGCC GTGGACGAAGAGGCGGGCAAGCGCCAAATCTATCATCGTTATTGCCTGGA GCGAGGTGCCACCCACTTGGCTCATGTGTTCACCACCGTCTCCGAGATTA CGGGCTACGAGGCAGAGCATCTGCTCAAGCGCAAACCGGACATCATCACG CCCAATGGACTGAACGTGAAGAAGTTCTCGGCCATCCACGAGTTCCAGAA CTTGCACGCCGTTGCCAAGGAGAAGATCAACGAATTCGTGCGGGGTCACT TTTACGGCCACATTGACTTTGATTTAGATAAGACCCTGTACTTCTTCATC GCCGGTCGCTACGAGTTTGGAAACAAGGGAGCCGACATCTTCATCGAGGC ACTGGCTCGCTTGAACGCGATGCTCAAGCACGAGAAGCCGGACACCACGG TGGTGGCCTTTCTCATCTTCCCCACCAAGACCAACAACTTCAACGTGGAC TCGCTGCGAGGACATGCCGTGATCAAGCAGTTGCGCGATACGATCAACAA CGTCCAGCAGGCCGTGGGCAAGCGGATGTTCGACACTTGTCTGCAGGGCA ACATACCCAATGCCGATGATCTGCTTCAGAAGGATGACCTCGTCAAGATC AAGCGTTGCATGTTCGCCATGCAGCGCGATTCGATGCCGCCTGTTACCAC GCACAATGTGGCTGATGACTGGAATGATCCGGTGCTATCCTCAATCCGTC GTTGCCATCTGTTCAACTCGCGCCACGATCGTGTCAAGATGGTCTTCCAT CCGGAGTTCCTCACATCCACAAATCCTCTGTTTGGAATCGACTACGAAGA ATTTGTCCGTGGCTGCCACTTGGGTGTCTTCCCCTCATACTACGAGCCCT GGGGTTACACTCCCGCCGAGTGTACGGTGATGGGTATCCCCAGCGTAACC ACCAATCTGTCCGGCTTTGGCTGCTTCATGGAGGAGCACATCAGTGATCC CAAGTCATACGGTATCTACATCGTGGATCGCCGCTATATCGGCTTGGAGA ACAGCGTTCAGCAGCTGTCCAGCTTTATGATGGAGTTCTCCAGGCTGAAC CGCCGCCAGCGCATTATCCAGCGTAATCGCACGGAGCGGTTGAGCGATCT TCTGGACTGGCGCACCCTGGGCATTTACTACAGACAGGCCAGGGTTAAGG CCCTGCAAGCTGTTTACCCAGACTATGTGGATGAATTGTCTCTCTATGGA TCGAAGAACAACTTGATCTTCTCGCGACCGCACAGCGAACCTCCCAGTCC TACTTCATCGCGGCACACCACTCCAGCTCCATCGGTTCACGGTTCGGATG ACGAGGACTCCGTGGATGAGGAGACCGAACTCAAGGAATTGGGGATTAAG TAGAGTTCTCTGCCAAATGGAAGGCCCTTATATTTGTAGCGAACAAACCA ATTAAAATCAACACACGCGCAATATTACCATAAGTTCCAGTTGTCTTGTT CCACCAATGTTCATCGAGATACGGGCTAAACTCTTGCCCGGATGCCTTCG AAACTATCTACCTGCAATTGAAATGCCAGAACAAATGTTTTCACATCTAA TCAAATTATTAATATTATGTATGCCCAGATCGCAAGCGTAAGCATTCGAG CAGGACGAGTCCAGATTTTATTAAACGTTGTTTAGTCCATAAGGAGAACG AGGTCTCCCCGCCCTGTCACCCAGCTTCATACCCTGCGTATCAAATAAAT CGTTATTTAAAGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 10968911..10969885 | 1107..133 | 4860 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 10967604..10968476 | 1975..1103 | 4350 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 10966488..10966939 | 2563..2112 | 2260 | 100 | Minus |
chr3R | 27901430 | chr3R | 10967373..10967509 | 2112..1976 | 685 | 100 | Minus |
chr3R | 27901430 | chr3R | 10969963..10970095 | 133..1 | 665 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15144266..15145240 | 1107..133 | 4875 | 100 | Minus |
3R | 32079331 | 3R | 15142959..15143831 | 1975..1103 | 4350 | 99.9 | Minus |
3R | 32079331 | 3R | 15141842..15142294 | 2564..2112 | 2265 | 100 | Minus |
3R | 32079331 | 3R | 15142728..15142864 | 2112..1976 | 685 | 100 | Minus |
3R | 32079331 | 3R | 15145318..15145450 | 133..1 | 665 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 14885097..14886071 | 1107..133 | 4875 | 100 | Minus |
3R | 31820162 | 3R | 14883790..14884662 | 1975..1103 | 4350 | 99.8 | Minus |
3R | 31820162 | 3R | 14882673..14883125 | 2564..2112 | 2265 | 100 | Minus |
3R | 31820162 | 3R | 14883559..14883695 | 2112..1976 | 685 | 100 | Minus |
3R | 31820162 | 3R | 14886149..14886281 | 133..1 | 665 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 10966488..10966939 | 2112..2563 | 100 | <- | Minus |
chr3R | 10967374..10967509 | 1976..2111 | 100 | <- | Minus |
chr3R | 10967604..10968471 | 1108..1975 | 100 | <- | Minus |
chr3R | 10968911..10969884 | 134..1107 | 99 | <- | Minus |
chr3R | 10969963..10970095 | 1..133 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6904-RA | 1..2130 | 74..2203 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6904-RA | 1..2130 | 74..2203 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GlyS-RA | 1..2130 | 74..2203 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GlyS-RA | 1..2130 | 74..2203 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6904-RA | 123..2685 | 1..2563 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6904-RA | 123..2685 | 1..2563 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GlyS-RA | 22..2584 | 1..2563 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
GlyS-RA | 22..2584 | 1..2563 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15141843..15142294 | 2112..2563 | 100 | <- | Minus |
3R | 15142729..15142864 | 1976..2111 | 100 | <- | Minus |
3R | 15142959..15143826 | 1108..1975 | 100 | <- | Minus |
3R | 15144266..15145239 | 134..1107 | 100 | <- | Minus |
3R | 15145318..15145450 | 1..133 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15141843..15142294 | 2112..2563 | 100 | <- | Minus |
3R | 15142729..15142864 | 1976..2111 | 100 | <- | Minus |
3R | 15142959..15143826 | 1108..1975 | 100 | <- | Minus |
3R | 15144266..15145239 | 134..1107 | 100 | <- | Minus |
3R | 15145318..15145450 | 1..133 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15141843..15142294 | 2112..2563 | 100 | <- | Minus |
3R | 15142729..15142864 | 1976..2111 | 100 | <- | Minus |
3R | 15142959..15143826 | 1108..1975 | 100 | <- | Minus |
3R | 15144266..15145239 | 134..1107 | 100 | <- | Minus |
3R | 15145318..15145450 | 1..133 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 10967565..10968016 | 2112..2563 | 100 | <- | Minus |
arm_3R | 10968451..10968586 | 1976..2111 | 100 | <- | Minus |
arm_3R | 10968681..10969548 | 1108..1975 | 100 | <- | Minus |
arm_3R | 10969988..10970961 | 134..1107 | 100 | <- | Minus |
arm_3R | 10971040..10971172 | 1..133 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14882674..14883125 | 2112..2563 | 100 | <- | Minus |
3R | 14883560..14883695 | 1976..2111 | 100 | <- | Minus |
3R | 14883790..14884657 | 1108..1975 | 100 | <- | Minus |
3R | 14885097..14886070 | 134..1107 | 100 | <- | Minus |
3R | 14886149..14886281 | 1..133 | 100 | Minus |
Translation from 73 to 2202
> GH19589.pep MRRQQSYRFEDNESTSYALRMNRRFSRVESGADLKDYFDRGDIASRENRW NFEVAWEVANKVGGIYTVIRSKAYVSTEEMGEQLCMMGPYKEHCARTEME EMEFPRGNPLLDAVNSLRSRGYKIHTGRWLVDGNPQLILFDIGSAAWKLD QFKSEMWEKCHIGIPHLDIETNDAIILGFMIAEFLEEFRNFAVTYSQNNE LSAPRIVAHFHEWQAGVGLIVLRTRLVEIATVFTTHATLLGRYLCAGNTD FYNNLDKFAVDEEAGKRQIYHRYCLERGATHLAHVFTTVSEITGYEAEHL LKRKPDIITPNGLNVKKFSAIHEFQNLHAVAKEKINEFVRGHFYGHIDFD LDKTLYFFIAGRYEFGNKGADIFIEALARLNAMLKHEKPDTTVVAFLIFP TKTNNFNVDSLRGHAVIKQLRDTINNVQQAVGKRMFDTCLQGNIPNADDL LQKDDLVKIKRCMFAMQRDSMPPVTTHNVADDWNDPVLSSIRRCHLFNSR HDRVKMVFHPEFLTSTNPLFGIDYEEFVRGCHLGVFPSYYEPWGYTPAEC TVMGIPSVTTNLSGFGCFMEEHISDPKSYGIYIVDRRYIGLENSVQQLSS FMMEFSRLNRRQRIIQRNRTERLSDLLDWRTLGIYYRQARVKALQAVYPD YVDELSLYGSKNNLIFSRPHSEPPSPTSSRHTTPAPSVHGSDDEDSVDEE TELKELGIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17161-PA | 709 | GF17161-PA | 1..709 | 1..709 | 3765 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20891-PA | 709 | GG20891-PA | 1..709 | 1..709 | 3853 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14560-PA | 711 | GH14560-PA | 2..711 | 1..709 | 3512 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GlyS-PA | 709 | CG6904-PA | 1..709 | 1..709 | 3769 | 100 | Plus |
GlyS-PD | 689 | CG6904-PD | 1..689 | 21..709 | 3667 | 100 | Plus |
GlyS-PB | 689 | CG6904-PB | 1..689 | 21..709 | 3667 | 100 | Plus |
GlyS-PC | 689 | CG6904-PC | 1..689 | 21..709 | 3667 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23664-PA | 709 | GI23664-PA | 1..709 | 1..709 | 3544 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21689-PA | 771 | GL21689-PA | 63..771 | 1..709 | 3606 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19945-PA | 709 | GA19945-PA | 1..709 | 1..709 | 3592 | 93.5 | Plus |
Dpse\GA19945-PB | 689 | GA19945-PB | 1..689 | 21..709 | 3515 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25805-PA | 709 | GM25805-PA | 1..709 | 1..709 | 3849 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20381-PA | 709 | GD20381-PA | 1..709 | 1..709 | 3853 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23225-PA | 710 | GJ23225-PA | 2..710 | 1..709 | 3616 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13980-PA | 709 | GK13980-PA | 1..709 | 1..709 | 3754 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26410-PA | 709 | GE26410-PA | 1..709 | 1..709 | 3853 | 100 | Plus |
Translation from 360 to 2489
> GH19589.hyp MRRQQSYRFEDNESTSYALRMNRRFSRVESGADLKDYFDRGDIASRENRW NFEVAWEVANKVGGIYTVIRSKAYVSTEEMGEQLCMMGPYKEHCARTEME EMEFPRGNPLLDAVNSLRSRGYKIHTGRWLVDGNPQLILFDIGSAAWKLD QFKSEMWEKCHIGIPHLDIETNDAIILGFMIAEFLEEFRNFAVTYSQNNE LSAPRIVAHFHEWQAGVGLIVLRTRLVEIATVFTTHATLLGRYLCAGNTD FYNNLDKFAVDEEAGKRQIYHRYCLERGATHLAHVFTTVSEITGYEAEHL LKRKPDIITPNGLNVKKFSAIHEFQNLHAVAKEKINEFVRGHFYGHIDFD LDKTLYFFIAGRYEFGNKGADIFIEALARLNAMLKHEKPDTTVVAFLIFP TKTNNFNVDSLRGHAVIKQLRDTINNVQQAVGKRMFDTCLQGNIPNADDL LQKDDLVKIKRCMFAMQRDSMPPVTTHNVADDWNDPVLSSIRRCHLFNSR HDRVKMVFHPEFLTSTNPLFGIDYEEFVRGCHLGVFPSYYEPWGYTPAEC TVMGIPSVTTNLSGFGCFMEEHISDPKSYGIYIVDRRYIGLENSVQQLSS FMMEFSRLNRRQRIIQRNRTERLSDLLDWRTLGIYYRQARVKALQAVYPD YVDELSLYGSKNNLIFSRPHSEPPSPTSSRHTTPAPSVHGSDDEDSVDEE TELKELGIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
GlyS-PA | 709 | CG6904-PA | 1..709 | 1..709 | 3769 | 100 | Plus |
GlyS-PD | 689 | CG6904-PD | 1..689 | 21..709 | 3667 | 100 | Plus |
GlyS-PB | 689 | CG6904-PB | 1..689 | 21..709 | 3667 | 100 | Plus |
GlyS-PC | 689 | CG6904-PC | 1..689 | 21..709 | 3667 | 100 | Plus |