BDGP Sequence Production Resources |
Search the DGRC for GH19593
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 195 |
Well: | 93 |
Vector: | pOT2 |
Associated Gene/Transcript | CG2854-RA |
Protein status: | GH19593.pep: gold |
Preliminary Size: | 1810 |
Sequenced Size: | 1641 |
Gene | Date | Evidence |
---|---|---|
CG2854 | 2001-11-08 | Blastp of sequenced clone |
CG2854 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2854 | 2008-04-29 | Release 5.5 accounting |
CG2854 | 2008-08-15 | Release 5.9 accounting |
CG2854 | 2008-12-18 | 5.12 accounting |
1641 bp (1641 high quality bases) assembled on 2001-11-08
GenBank Submission: AY069165
> GH19593.complete ATCACATTTTTTTTTTTTCTAATATTCAAAATTCGTACCACTTGGCAGCA CTTAAAATGGTCACATTGCGCTTCCTGACTCCTCGCAGGATCGTCGACTA TTGTCGTCGTCTGCTGAGCACGGACCTGGTCACGGCCCTTCGTCCGTTCT ACCAGGCCATTCGGACGGATGGCCTGGCTCACAATCCGGCAGAGAAGCGG GTTAACGAGGAGTCACTACGTCTGCTTTGCTCCCATCTGGAATCCCTGAC TGGGCCGTCGGCAAGTTGTCTTCCGCCCGATGGCCATTTGGAGTTCTATA TTCCATCGGGCTCGGATGAGTCCGGTAGTCGGGTGGTTAGTCGACTGGTT AGGGTGCAGGTAGACCGGAGTTTATTGGATCCCAGGGCGGTGATTTGCCA GATTCTGAGGTCATGTAAGCTGCTGCCGAAGGAAAAGGAGCAGGAACAAA TGAAGCGGGGTCAGGAGATGGAAAAGGAGCTCGGAAAAGTGCTGAGAAAG GAACCGGTGAGGGAAAGGGTGAGACCGCCCCAAGCGCCAGTGCAAAAGAA TTTGAGTGCCTTAAGGGAACTCTTTAAGGATGCCAAAAGGGAGCACTCTT TGGAAATATGGATGCGTCAGGCCCTGGCACGTTCCCAGGCCTCCGAAGTC GCTACTCTACGCGGCAAAATCGAGGGCATTGAAGCGGCTTTGGTCCAGTT GTTGGGCATTCGGGGAACCCGTTACGATTGTGGCTGCAACATGGAACGCT ACCACAACTGCCTCAGCATCCTCAAGGGCTTGTCCGAGGATCCGAAGGTC GCCGGCCAGCTGGGAGCCCTTCGCAATCGTTTTGTGGTCTTCGCACCGTA CACTGGTATTAGCTTGGAGGGCGATGTAATGCTCTTTTCGGGCGACTCCC CCTCGGGTTGGCTGGCCTTCCTCTCCGAGATGCGTTTGCACGAGGAGCAA CTGAGACTGGTGCCCCTGTACGAGAAAGCCCTGTCTGCCGTGCTCCTTGG CATACGGATTGAGAGGCGTAGGGTTCCGGAGCCGGGCTGTGAGGCGCGTG CCTATGCGGGCAGCTTGAGGCGCGTGATCCGTGCGGTCAGTGAGCACCTG AGGCTGGAGGATAGTGTCCAGGAGTTGCCGGCATCGCTGCAGGACCATCA TTTGGCCATTGTGCCGGATAGTGATATACCGAAGGTTAGCCAAACCGGTC TCTTCTTGGCCCCGGCCTCCTGCTCCGGACCCGATCTCGTGGAGTTCATA TGCCGGAACTTGGACGTGGCCAGCGGGCGGTTCAGTCGCTATCGCAGGGA TATCCAGGTGGAGCGGCAATTGTGGCGACAGTGCCAGGAGGAACTTGGCT TGCAGCGACTCAGCAAGGACGACTCTGTAACGCCGGACAAGATGGTCATG GCCATACGGCATCTGCTTCAGAGTGGCGTCAAGTCCTGTCGCGGTCTCAG TCTGCACATCACGAACTATTGGTCAGTGCCCACCGATGGCATCGTCTGCA TTCCCTGGGACTTTATGTCACGCGAGAAGTAGCGCATCCTGCTGGGTTGT GTCACTTAAATTGCATAAATTGGTAGATAAATTGAAAGGTTTGGGCTTAC GCTTTTAAATGTTCAACTCGAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 2221093..2221532 | 19..458 | 99 | -> | Plus |
chrX | 2221704..2222865 | 459..1620 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2854-RA | 1..1476 | 57..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2854-RA | 1..1476 | 57..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2854-RA | 1..1476 | 57..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2854-RA | 1..1476 | 57..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2854-RA | 1..1476 | 57..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2854-RA | 42..1643 | 19..1620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2854-RA | 42..1643 | 19..1620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2854-RA | 42..1643 | 19..1620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2854-RA | 42..1643 | 19..1620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2854-RA | 42..1643 | 19..1620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2327169..2327608 | 19..458 | 100 | -> | Plus |
X | 2327780..2328941 | 459..1620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2327169..2327608 | 19..458 | 100 | -> | Plus |
X | 2327780..2328941 | 459..1620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2327169..2327608 | 19..458 | 100 | -> | Plus |
X | 2327780..2328941 | 459..1620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 2221202..2221641 | 19..458 | 100 | -> | Plus |
arm_X | 2221813..2222974 | 459..1620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 2335267..2335706 | 19..458 | 100 | -> | Plus |
X | 2335878..2337039 | 459..1620 | 100 | Plus |
Translation from 20 to 1531
> GH19593.hyp NIQNSYHLAALKMVTLRFLTPRRIVDYCRRLLSTDLVTALRPFYQAIRTD GLAHNPAEKRVNEESLRLLCSHLESLTGPSASCLPPDGHLEFYIPSGSDE SGSRVVSRLVRVQVDRSLLDPRAVICQILRSCKLLPKEKEQEQMKRGQEM EKELGKVLRKEPVRERVRPPQAPVQKNLSALRELFKDAKREHSLEIWMRQ ALARSQASEVATLRGKIEGIEAALVQLLGIRGTRYDCGCNMERYHNCLSI LKGLSEDPKVAGQLGALRNRFVVFAPYTGISLEGDVMLFSGDSPSGWLAF LSEMRLHEEQLRLVPLYEKALSAVLLGIRIERRRVPEPGCEARAYAGSLR RVIRAVSEHLRLEDSVQELPASLQDHHLAIVPDSDIPKVSQTGLFLAPAS CSGPDLVEFICRNLDVASGRFSRYRRDIQVERQLWRQCQEELGLQRLSKD DSVTPDKMVMAIRHLLQSGVKSCRGLSLHITNYWSVPTDGIVCIPWDFMS REK*
Translation from 56 to 1531
> GH19593.pep MVTLRFLTPRRIVDYCRRLLSTDLVTALRPFYQAIRTDGLAHNPAEKRVN EESLRLLCSHLESLTGPSASCLPPDGHLEFYIPSGSDESGSRVVSRLVRV QVDRSLLDPRAVICQILRSCKLLPKEKEQEQMKRGQEMEKELGKVLRKEP VRERVRPPQAPVQKNLSALRELFKDAKREHSLEIWMRQALARSQASEVAT LRGKIEGIEAALVQLLGIRGTRYDCGCNMERYHNCLSILKGLSEDPKVAG QLGALRNRFVVFAPYTGISLEGDVMLFSGDSPSGWLAFLSEMRLHEEQLR LVPLYEKALSAVLLGIRIERRRVPEPGCEARAYAGSLRRVIRAVSEHLRL EDSVQELPASLQDHHLAIVPDSDIPKVSQTGLFLAPASCSGPDLVEFICR NLDVASGRFSRYRRDIQVERQLWRQCQEELGLQRLSKDDSVTPDKMVMAI RHLLQSGVKSCRGLSLHITNYWSVPTDGIVCIPWDFMSREK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22210-PA | 460 | GF22210-PA | 17..453 | 16..486 | 1556 | 65.1 | Plus |
Dana\GF10929-PA | 487 | GF10929-PA | 24..487 | 18..489 | 767 | 36.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12929-PA | 493 | GG12929-PA | 1..493 | 1..491 | 2406 | 92.9 | Plus |
Dere\GG14090-PA | 485 | GG14090-PA | 11..485 | 5..489 | 784 | 37.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16445-PA | 482 | GH16445-PA | 8..482 | 4..489 | 786 | 36.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2854-PA | 491 | CG2854-PA | 1..491 | 1..491 | 2525 | 100 | Plus |
CG13295-PA | 485 | CG13295-PA | 11..485 | 5..489 | 763 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16700-PA | 493 | GI16700-PA | 28..493 | 13..489 | 775 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15525-PA | 496 | GL15525-PA | 31..496 | 17..489 | 781 | 36.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12178-PA | 496 | GA12178-PA | 31..496 | 17..489 | 780 | 36.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19221-PA | 491 | GM19221-PA | 1..491 | 1..491 | 2468 | 95.5 | Plus |
Dsec\GM13873-PA | 485 | GM13873-PA | 11..485 | 5..489 | 784 | 36.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16606-PA | 455 | GD16606-PA | 1..455 | 1..491 | 2145 | 85.6 | Plus |
Dsim\GD13157-PA | 486 | GD13157-PA | 11..485 | 5..489 | 773 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12436-PA | 489 | GJ12436-PA | 28..489 | 17..489 | 802 | 38.2 | Plus |