BDGP Sequence Production Resources |
Search the DGRC for GH19849
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 198 |
Well: | 49 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6656-RA |
Protein status: | GH19849.pep: gold |
Preliminary Size: | 1695 |
Sequenced Size: | 1546 |
Gene | Date | Evidence |
---|---|---|
CG6656 | 2001-01-01 | Release 2 assignment |
CG6656 | 2001-10-10 | Blastp of sequenced clone |
CG33092 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6656 | 2008-04-29 | Release 5.5 accounting |
CG6656 | 2008-08-15 | Release 5.9 accounting |
CG6656 | 2008-12-18 | 5.12 accounting |
1546 bp (1546 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060747
> GH19849.complete TTTTGTTGCCATCGGACGTGACTTGTATTTATTTATTATTTGTTTCGTCG ACGGGGGCAGCGAAATCGAAAACACTCGCTATAAAATAAACAAAAAACTA TTTTTAGGCTGCAAATCTGAAATATATTTTCTCGATCAACTGCAGCAGGA GCATAGAGACGCCACCGCACCCCCTCCCTAAAAATGGACTGCAAATCGCG ACGCGGCACCAAAATATCGGTGATCGCCCTGGGAAGTGCCCTCTGTTTCG TCATGATGGCATACTTTGTGTTCGGCGACAGCAACGACGAGCAGGGTTTG CGGAATCTACGCATGATATCCATACTGTTCCGACATGGTGCCAAGAATCC GAGTGGCTTCTATCCGTTGGATCCGCACGCTGCCCACGACTGGCAGGGCG GGATGGGAGCCCTCACGCCGAAAGGCAGCCTGCAGGCGTACAACCTGGGA AGGAATCTGCGCATGCGCTACTACCGTCTGCTGCCTCCGAACAGCCTTTA CACCCAGCAGCAGGTGAATGTGCTCAGCTCGGCCGCGGAACGCTGTGTGA TGAGCGCCCAGAGCGTCTTGGCCGGCATGATGCCGCCGCTGGAGAACAAG AATGTGCTACCCATTCCCTGGCAGCCGGTGGCCGTCAATACGCTATCTCG CAATGAAGATATCCTGTTGGCCCAAAAGAAACCGTGCTTGAAATATGACC ACATTCTGCAGAAGCTTTACAAATCTCCGCCTCCTGAACTCCAGAAACTG AACGAGGACAACATGGAGCTGTACAAATTGCTAACCAAAAACACAGGCAA GAACATTTCAAATGTACTGGACGTGGAGCTACTCTATGGCACACTCAAAA CCGAAGAGGAAGCTAATCTGGTGCTGCCCGATTGGACTGAGAATATATAC CCCGAGGAGATTAGGCCACTAGCTGAACGTAGCTATATGCTATTCACCGA AACAAATCTAATGAAGCGGATTAAGGGTGGCGCTTTCCTTACGGATATAC TCAACAAAATGCAGAATAAGCGCAAGAGGAATCTCAATCCCGATCGCAAA ATATTCCTGTACTCCGGTCATGATGTGACTTTGGTTAACGTGATGAATTC CCTGGGCATACTGGACCAGACTACCAAGCTTCCGGAATATGCATCGGCAT TGGCCTTCGAGCTTCATCACAGCAAGTCTTTCAGTGATGGAGACTTTGAA GTGAAGTTGGTTTACTACTACAACAGCGAAGACAAATTCCCCAAGGAGCT GACCATTCCCAATTGCGATGCACCGTGCTCACTGACCCAGTTTGAGGCCT CTGTAAAGGCCCTGCTTCTAGATAACTATGATGAGACTTGTGAAAATCAT CCGACCGATTGCAAAACATAAGATGCCTTCCAGACTTTGTTGAAAGTGTG TGTCGTTCTGGGTTGTTGTTTAAGTGTCTGGCCATTGCTAAGAAATAGTC AGATGTGATTTTGGATAATTTTAAATAATTGGTTTCAATTAATAGCTTTA AAATAAAACTAAGTCAAGTAGACAAACTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 17700717..17701123 | 800..1206 | 1960 | 98.8 | Plus |
chr3R | 27901430 | chr3R | 17699030..17699352 | 1..324 | 1570 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 17701185..17701508 | 1205..1528 | 1515 | 97.8 | Plus |
chr3R | 27901430 | chr3R | 17700484..17700621 | 664..801 | 675 | 99.3 | Plus |
chr3R | 27901430 | chr3R | 17700070..17700199 | 420..549 | 620 | 98.5 | Plus |
chr3R | 27901430 | chr3R | 17700297..17700411 | 549..663 | 545 | 98.3 | Plus |
chr3R | 27901430 | chr3R | 17699437..17699532 | 325..420 | 450 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 21876994..21877400 | 800..1206 | 2035 | 100 | Plus |
3R | 32079331 | 3R | 21877465..21877790 | 1205..1530 | 1630 | 100 | Plus |
3R | 32079331 | 3R | 21875307..21875630 | 1..324 | 1620 | 100 | Plus |
3R | 32079331 | 3R | 21876761..21876898 | 664..801 | 690 | 100 | Plus |
3R | 32079331 | 3R | 21876347..21876476 | 420..549 | 650 | 100 | Plus |
3R | 32079331 | 3R | 21876574..21876688 | 549..663 | 575 | 100 | Plus |
3R | 32079331 | 3R | 21875715..21875810 | 325..420 | 480 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 21617825..21618231 | 800..1206 | 2035 | 100 | Plus |
3R | 31820162 | 3R | 21618296..21618621 | 1205..1530 | 1630 | 100 | Plus |
3R | 31820162 | 3R | 21616138..21616461 | 1..324 | 1620 | 100 | Plus |
3R | 31820162 | 3R | 21617592..21617729 | 664..801 | 690 | 100 | Plus |
3R | 31820162 | 3R | 21617178..21617307 | 420..549 | 650 | 100 | Plus |
3R | 31820162 | 3R | 21617405..21617519 | 549..663 | 575 | 100 | Plus |
3R | 31820162 | 3R | 21616546..21616641 | 325..420 | 480 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 17700298..17700411 | 550..663 | 98 | -> | Plus |
chr3R | 17700484..17700621 | 664..801 | 99 | -> | Plus |
chr3R | 17699437..17699532 | 325..420 | 97 | -> | Plus |
chr3R | 17700071..17700199 | 421..549 | 98 | -> | Plus |
chr3R | 17699030..17699352 | 1..324 | 99 | -> | Plus |
chr3R | 17700719..17701123 | 802..1206 | 98 | -> | Plus |
chr3R | 17701187..17701508 | 1207..1528 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6656-RA | 1..1188 | 184..1371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6656-RA | 1..1188 | 184..1371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6656-RA | 1..1188 | 184..1371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6656-RA | 1..1188 | 184..1371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6656-RA | 1..1188 | 184..1371 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6656-RA | 15..1542 | 1..1528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6656-RA | 15..1542 | 1..1528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6656-RA | 15..1542 | 1..1528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6656-RA | 5..1532 | 1..1528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6656-RA | 15..1542 | 1..1528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21875307..21875630 | 1..324 | 100 | -> | Plus |
3R | 21875715..21875810 | 325..420 | 100 | -> | Plus |
3R | 21876348..21876476 | 421..549 | 100 | -> | Plus |
3R | 21876575..21876688 | 550..663 | 100 | -> | Plus |
3R | 21876761..21876898 | 664..801 | 100 | -> | Plus |
3R | 21876996..21877400 | 802..1206 | 100 | -> | Plus |
3R | 21877467..21877788 | 1207..1528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21875307..21875630 | 1..324 | 100 | -> | Plus |
3R | 21875715..21875810 | 325..420 | 100 | -> | Plus |
3R | 21876348..21876476 | 421..549 | 100 | -> | Plus |
3R | 21876575..21876688 | 550..663 | 100 | -> | Plus |
3R | 21876761..21876898 | 664..801 | 100 | -> | Plus |
3R | 21876996..21877400 | 802..1206 | 100 | -> | Plus |
3R | 21877467..21877788 | 1207..1528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21875307..21875630 | 1..324 | 100 | -> | Plus |
3R | 21875715..21875810 | 325..420 | 100 | -> | Plus |
3R | 21876348..21876476 | 421..549 | 100 | -> | Plus |
3R | 21876575..21876688 | 550..663 | 100 | -> | Plus |
3R | 21876761..21876898 | 664..801 | 100 | -> | Plus |
3R | 21876996..21877400 | 802..1206 | 100 | -> | Plus |
3R | 21877467..21877788 | 1207..1528 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 17703189..17703510 | 1207..1528 | 100 | Plus | |
arm_3R | 17701029..17701352 | 1..324 | 100 | -> | Plus |
arm_3R | 17701437..17701532 | 325..420 | 100 | -> | Plus |
arm_3R | 17702070..17702198 | 421..549 | 100 | -> | Plus |
arm_3R | 17702297..17702410 | 550..663 | 100 | -> | Plus |
arm_3R | 17702483..17702620 | 664..801 | 100 | -> | Plus |
arm_3R | 17702718..17703122 | 802..1206 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21617179..21617307 | 421..549 | 100 | -> | Plus |
3R | 21617406..21617519 | 550..663 | 100 | -> | Plus |
3R | 21617592..21617729 | 664..801 | 100 | -> | Plus |
3R | 21616138..21616461 | 1..324 | 100 | -> | Plus |
3R | 21616546..21616641 | 325..420 | 100 | -> | Plus |
3R | 21617827..21618231 | 802..1206 | 100 | -> | Plus |
3R | 21618298..21618619 | 1207..1528 | 100 | Plus |
Translation from 183 to 1370
> GH19849.pep MDCKSRRGTKISVIALGSALCFVMMAYFVFGDSNDEQGLRNLRMISILFR HGAKNPSGFYPLDPHAAHDWQGGMGALTPKGSLQAYNLGRNLRMRYYRLL PPNSLYTQQQVNVLSSAAERCVMSAQSVLAGMMPPLENKNVLPIPWQPVA VNTLSRNEDILLAQKKPCLKYDHILQKLYKSPPPELQKLNEDNMELYKLL TKNTGKNISNVLDVELLYGTLKTEEEANLVLPDWTENIYPEEIRPLAERS YMLFTETNLMKRIKGGAFLTDILNKMQNKRKRNLNPDRKIFLYSGHDVTL VNVMNSLGILDQTTKLPEYASALAFELHHSKSFSDGDFEVKLVYYYNSED KFPKELTIPNCDAPCSLTQFEASVKALLLDNYDETCENHPTDCKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18050-PA | 398 | GF18050-PA | 4..397 | 1..394 | 1951 | 91.1 | Plus |
Dana\GF10755-PA | 408 | GF10755-PA | 44..395 | 32..387 | 549 | 34 | Plus |
Dana\GF16215-PA | 438 | GF16215-PA | 48..385 | 42..387 | 490 | 33.2 | Plus |
Dana\GF10754-PA | 423 | GF10754-PA | 62..409 | 41..392 | 476 | 32.5 | Plus |
Dana\GF10756-PA | 304 | GF10756-PA | 35..293 | 41..299 | 416 | 36.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11088-PA | 395 | GG11088-PA | 1..395 | 1..395 | 2090 | 98 | Plus |
Dere\GG13404-PA | 391 | GG13404-PA | 35..378 | 41..388 | 539 | 35.5 | Plus |
Dere\GG13403-PA | 410 | GG13403-PA | 45..401 | 31..391 | 520 | 32.6 | Plus |
Dere\GG11981-PA | 436 | GG11981-PA | 45..383 | 41..387 | 498 | 32.6 | Plus |
Dere\GG13402-PA | 422 | GG13402-PA | 61..405 | 41..389 | 460 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16334-PA | 398 | GH16334-PA | 4..397 | 1..394 | 1842 | 85.3 | Plus |
Dgri\GH14400-PA | 390 | GH14400-PA | 3..355 | 8..367 | 532 | 34.8 | Plus |
Dgri\GH14399-PA | 397 | GH14399-PA | 42..383 | 41..386 | 525 | 34.1 | Plus |
Dgri\GH22183-PA | 444 | GH22183-PA | 54..391 | 42..387 | 457 | 33.2 | Plus |
Dgri\GH14397-PA | 419 | GH14397-PA | 61..405 | 41..389 | 409 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6656-PA | 395 | CG6656-PA | 1..395 | 1..395 | 2080 | 100 | Plus |
CG9449-PK | 391 | CG9449-PK | 36..378 | 42..388 | 542 | 35.8 | Plus |
CG9449-PH | 404 | CG9449-PH | 49..391 | 42..388 | 542 | 35.8 | Plus |
CG9449-PG | 404 | CG9449-PG | 49..391 | 42..388 | 542 | 35.8 | Plus |
CG9449-PF | 404 | CG9449-PF | 49..391 | 42..388 | 542 | 35.8 | Plus |
CG9451-PB | 410 | CG9451-PB | 47..397 | 33..387 | 528 | 34 | Plus |
CG9451-PA | 410 | CG9451-PA | 47..397 | 33..387 | 528 | 34 | Plus |
Acph-1-PA | 438 | CG7899-PA | 48..385 | 42..387 | 476 | 32.4 | Plus |
Acph-1-PB | 455 | CG7899-PB | 65..402 | 42..387 | 476 | 32.4 | Plus |
CG9452-PA | 422 | CG9452-PA | 62..408 | 42..392 | 466 | 32 | Plus |
CG9449-PJ | 164 | CG9449-PJ | 36..154 | 42..159 | 170 | 33.1 | Plus |
CG9449-PE | 177 | CG9449-PE | 49..167 | 42..159 | 170 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22190-PA | 398 | GI22190-PA | 4..397 | 1..394 | 1840 | 85.5 | Plus |
Dmoj\GI13526-PA | 390 | GI13526-PA | 13..355 | 20..367 | 522 | 34.7 | Plus |
Dmoj\GI21969-PA | 428 | GI21969-PA | 38..375 | 42..387 | 491 | 32.7 | Plus |
Dmoj\GI13525-PA | 393 | GI13525-PA | 7..378 | 14..386 | 488 | 31.7 | Plus |
Dmoj\GI13524-PA | 407 | GI13524-PA | 49..383 | 41..381 | 424 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23800-PA | 398 | GL23800-PA | 4..397 | 1..394 | 1976 | 92.9 | Plus |
Dper\GL20896-PA | 390 | GL20896-PA | 34..377 | 41..388 | 532 | 34.6 | Plus |
Dper\GL20895-PA | 399 | GL20895-PA | 43..384 | 41..386 | 520 | 33.5 | Plus |
Dper\GL13492-PA | 446 | GL13492-PA | 56..393 | 42..387 | 490 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19756-PA | 398 | GA19756-PA | 4..397 | 1..394 | 1978 | 92.9 | Plus |
Dpse\GA21794-PA | 390 | GA21794-PA | 34..377 | 41..388 | 529 | 34.6 | Plus |
Dpse\GA21796-PA | 413 | GA21796-PA | 57..398 | 41..386 | 516 | 33.2 | Plus |
Dpse\GA26867-PA | 446 | GA26867-PA | 56..393 | 42..387 | 495 | 34.1 | Plus |
Dpse\GA28226-PA | 425 | GA28226-PA | 63..410 | 41..392 | 458 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26381-PA | 395 | GM26381-PA | 1..395 | 1..395 | 2119 | 99.7 | Plus |
Dsec\GM18426-PA | 391 | GM18426-PA | 35..378 | 41..388 | 542 | 35.5 | Plus |
Dsec\GM18316-PA | 411 | GM18316-PA | 56..398 | 41..387 | 535 | 33.9 | Plus |
Dsec\GM12199-PA | 438 | GM12199-PA | 48..385 | 42..387 | 473 | 32.1 | Plus |
Dsec\GM18213-PA | 422 | GM18213-PA | 61..405 | 41..389 | 462 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20904-PA | 363 | GD20904-PA | 1..363 | 1..395 | 1887 | 91.6 | Plus |
Dsim\GD12277-PA | 411 | GD12277-PA | 56..398 | 41..387 | 540 | 34.5 | Plus |
Dsim\GD17508-PA | 406 | GD17508-PA | 48..385 | 42..387 | 477 | 32.4 | Plus |
Dsim\GD12276-PA | 422 | GD12276-PA | 61..405 | 41..389 | 470 | 32.2 | Plus |
Dsim\GD12279-PA | 139 | GD12279-PA | 1..127 | 260..389 | 221 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24309-PA | 398 | GJ24309-PA | 4..397 | 1..394 | 1846 | 86.3 | Plus |
Dvir\GJ11885-PA | 390 | GJ11885-PA | 34..355 | 41..367 | 542 | 37.5 | Plus |
Dvir\Acph-PA | 435 | GJ14328-PA | 33..382 | 35..387 | 513 | 33 | Plus |
Dvir\GJ11884-PA | 399 | GJ11884-PA | 43..384 | 41..386 | 497 | 33 | Plus |
Dvir\GJ11883-PA | 409 | GJ11883-PA | 50..397 | 41..392 | 412 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14232-PA | 398 | GK14232-PA | 4..397 | 1..394 | 1965 | 92.4 | Plus |
Dwil\GK19469-PA | 393 | GK19469-PA | 37..358 | 41..367 | 529 | 36.2 | Plus |
Dwil\GK19447-PA | 420 | GK19447-PA | 7..402 | 5..389 | 517 | 32 | Plus |
Dwil\GK14084-PA | 434 | GK14084-PA | 43..381 | 41..387 | 499 | 34 | Plus |
Dwil\GK19458-PA | 414 | GK19458-PA | 54..400 | 31..386 | 498 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10249-PA | 395 | GE10249-PA | 1..395 | 1..395 | 2090 | 98.5 | Plus |
Dyak\GE22499-PA | 391 | GE22499-PA | 35..378 | 41..388 | 546 | 36 | Plus |
Dyak\GE22776-PA | 410 | GE22776-PA | 55..397 | 41..387 | 524 | 33.3 | Plus |
Dyak\GE22498-PA | 410 | GE22498-PA | 55..397 | 41..387 | 524 | 33.3 | Plus |
Dyak\GE10406-PA | 438 | GE10406-PA | 47..385 | 41..387 | 501 | 32.9 | Plus |
Translation from 183 to 1370
> GH19849.hyp MDCKSRRGTKISVIALGSALCFVMMAYFVFGDSNDEQGLRNLRMISILFR HGAKNPSGFYPLDPHAAHDWQGGMGALTPKGSLQAYNLGRNLRMRYYRLL PPNSLYTQQQVNVLSSAAERCVMSAQSVLAGMMPPLENKNVLPIPWQPVA VNTLSRNEDILLAQKKPCLKYDHILQKLYKSPPPELQKLNEDNMELYKLL TKNTGKNISNVLDVELLYGTLKTEEEANLVLPDWTENIYPEEIRPLAERS YMLFTETNLMKRIKGGAFLTDILNKMQNKRKRNLNPDRKIFLYSGHDVTL VNVMNSLGILDQTTKLPEYASALAFELHHSKSFSDGDFEVKLVYYYNSED KFPKELTIPNCDAPCSLTQFEASVKALLLDNYDETCENHPTDCKT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6656-PA | 395 | CG6656-PA | 1..395 | 1..395 | 2080 | 100 | Plus |
CG9449-PK | 391 | CG9449-PK | 36..378 | 42..388 | 542 | 35.8 | Plus |
CG9449-PH | 404 | CG9449-PH | 49..391 | 42..388 | 542 | 35.8 | Plus |
CG9449-PG | 404 | CG9449-PG | 49..391 | 42..388 | 542 | 35.8 | Plus |
CG9449-PF | 404 | CG9449-PF | 49..391 | 42..388 | 542 | 35.8 | Plus |