BDGP Sequence Production Resources |
Search the DGRC for GH19985
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 199 |
Well: | 85 |
Vector: | pOT2 |
Associated Gene/Transcript | CG32700-RA |
Protein status: | GH19985.pep: gold |
Preliminary Size: | 1580 |
Sequenced Size: | 1471 |
Gene | Date | Evidence |
---|---|---|
CG2994 | 2001-01-01 | Release 2 assignment |
CG12651 | 2001-01-01 | Release 2 assignment |
CG12652 | 2001-01-01 | Release 2 assignment |
CG32700 | 2001-09-19 | Blastp of sequenced clone |
CG32700 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32700 | 2008-04-29 | Release 5.5 accounting |
CG32700 | 2008-08-15 | Release 5.9 accounting |
CG32700 | 2008-12-18 | 5.12 accounting |
1471 bp (1471 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060321
> GH19985.complete AGACTCTCGTGCGGTTCGGTTCTCAGCCTCAGCCTTTGAATTCAGCATAC TCACATCACAGTCGCAAGTCACTGGTCACTGGTCACAGTTCACAGTCACG CAGTTACTGCCTTTGCCCGGTTTTCGATTTTCGAAAGATATTCGAAAGTG CTGAACATACATAATTTTTTTTTTTTTTGGTTTTTGTGCTAATCTAAGAA ATTGAGTATATATACATAAATATACACATAAAGTGCAATAGCGTTCCGAA ATACCATTTTTCAATTCGAATACAAACGACCGAGCCGAAGTGAAAGAGTG TGTGTGGCAAATATTTAAATCCCATTCGCGTTCCGATTCGGAGGAGGATT TGGCGGAGAAAGCTTGAGACACAGAGAACACACCGCAGTCAAAGAGTAAG CAAAGTAATTGAAGCAGCCAGAAAAAATGCGTCGCTCCTCGTTCACGCCC GTCTTCAACTTGAGCACCCAGGAGCCGCTGATCGTGGTGGAGGAATCGCA CACCGCCGAGGATGGTGATGACTTGGAGGGTGCCGCCGGTGGATGTGATC CCACTGCGGCCGGGACACGCCGTTCCAACAGCGATGACTCCGAACCGGAC TCGCCGGTGAATCCCTATCTGCTTTGCCCATTTCCCGATATGCAACAGCG ACGCAAGCATTCGCTGCCATCGCTTCAAATTACCGAGGGCATCACCGCCA GTCAGGTGCGTCGATTGTCGGAGGTGGGCGGCGAGACTGGCGGGCTCAGT CCCAAGGAGGTCGAGTTTCTGGCCACGCTCTCGCAGAAGGCCAATCCGAC GGCCGGTGGACGTAGGCACTCGGTGGTCACCATATCGGCGGTGCCGCCAA CGCTTTTCGGACGCAATCGCCGCGAGTCCATTTCCGGTGTATCCTTCAGT GGCAGTCGCCGTGGCAGCGTCATCGCCGGACCGCCATTAACCGATCACCG CGGCAGCGTGCACAACTTGCAGCTGGACATCATGGATGGCATCGTCCAGC AGCGGAAGACGCGCAGCGGAAGCGGCGTCTGGACAGCGCCCGTTCTGCAG GAGGCCGATAGCAATGTGCCCGTGCAGACATAAGCAGCTGAAGGACACGC ACGATAGCAAGGGGGGAAAAGGACGAAAAATGGACGAATGTGGAGAAGGA TGGATGGATGAATGGATGGCTGGATGGTTGGATGGGGATTTCTTCGACAG ATGGACGGATGAATTCGGTTGGACACTGGGCAATACAAACAACCAAATGC CTGGAAACTCCGAACCAACTCGAACTGCAACTGGACCTTTATTAACATTT CGTGCTTTCCACCCGACAAAGGAAAAAAAAAACACACCCCTCACACTCTG CCCCCCTACGATTTTCCACCGGGAAATTGCTTTTCGCGGCTGCCGCATAA AGCAAACAAACAAACCACAAAAACCGCATGAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32700.d | 4015 | CG32700.d | 1956..3406 | 1..1452 | 7190 | 99.7 | Plus |
CG32700.a | 3584 | CG32700.a | 2118..3568 | 1..1452 | 7190 | 99.7 | Plus |
CG32700-RA | 1870 | CG32700-RA | 404..1854 | 1..1452 | 7190 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 9398464..9398997 | 1430..897 | 2670 | 100 | Minus |
chrX | 22417052 | chrX | 9401892..9402398 | 899..393 | 2535 | 100 | Minus |
chrX | 22417052 | chrX | 9442146..9442538 | 394..1 | 1920 | 99.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
FB | 1106 | FB DMTNFB 1106bp AKA(J01084) Derived from V00246 (g8708) (Rel. 36, Last updated, Version 3). | 123..190 | 120..187 | 132 | 69.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9442146..9442538 | 1..394 | 99 | Minus | |
chrX | 9398464..9398994 | 900..1430 | 92 | <- | Minus |
chrX | 9401892..9402396 | 395..899 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32700-RB | 1..657 | 427..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32700-RB | 1..657 | 427..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32700-RA | 1..657 | 427..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32700-RB | 1..657 | 427..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32700-RA | 1..657 | 427..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32700-RA | 404..1832 | 1..1430 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32700-RA | 404..1832 | 1..1430 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32700-RA | 13..1441 | 1..1430 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32700-RA | 404..1832 | 1..1430 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32700-RA | 13..1441 | 1..1430 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9506732..9507262 | 900..1430 | 100 | <- | Minus |
X | 9510160..9510664 | 395..899 | 100 | <- | Minus |
X | 9550434..9550826 | 1..394 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9506732..9507262 | 900..1430 | 100 | <- | Minus |
X | 9510160..9510664 | 395..899 | 100 | <- | Minus |
X | 9550434..9550826 | 1..394 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9506732..9507262 | 900..1430 | 100 | <- | Minus |
X | 9510160..9510664 | 395..899 | 100 | <- | Minus |
X | 9550434..9550826 | 1..394 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9400765..9401295 | 900..1430 | 100 | <- | Minus |
arm_X | 9404193..9404697 | 395..899 | 100 | <- | Minus |
arm_X | 9444467..9444859 | 1..394 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9514830..9515360 | 900..1430 | 100 | <- | Minus |
X | 9518258..9518762 | 395..899 | 100 | <- | Minus |
X | 9558532..9558924 | 1..394 | 99 | Minus |
Translation from 426 to 1082
> GH19985.hyp MRRSSFTPVFNLSTQEPLIVVEESHTAEDGDDLEGAAGGCDPTAAGTRRS NSDDSEPDSPVNPYLLCPFPDMQQRRKHSLPSLQITEGITASQVRRLSEV GGETGGLSPKEVEFLATLSQKANPTAGGRRHSVVTISAVPPTLFGRNRRE SISGVSFSGSRRGSVIAGPPLTDHRGSVHNLQLDIMDGIVQQRKTRSGSG VWTAPVLQEADSNVPVQT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32700-PB | 218 | CG32700-PB | 1..218 | 1..218 | 1120 | 100 | Plus |
CG32700-PA | 218 | CG32700-PA | 1..218 | 1..218 | 1120 | 100 | Plus |
CG6123-PB | 614 | CG6123-PB | 44..247 | 12..215 | 458 | 53.7 | Plus |
CG6123-PA | 614 | CG6123-PA | 44..247 | 12..215 | 458 | 53.7 | Plus |
Translation from 426 to 1082
> GH19985.pep MRRSSFTPVFNLSTQEPLIVVEESHTAEDGDDLEGAAGGCDPTAAGTRRS NSDDSEPDSPVNPYLLCPFPDMQQRRKHSLPSLQITEGITASQVRRLSEV GGETGGLSPKEVEFLATLSQKANPTAGGRRHSVVTISAVPPTLFGRNRRE SISGVSFSGSRRGSVIAGPPLTDHRGSVHNLQLDIMDGIVQQRKTRSGSG VWTAPVLQEADSNVPVQT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21797-PA | 219 | GF21797-PA | 1..219 | 1..218 | 1095 | 96.3 | Plus |
Dana\GF22512-PA | 620 | GF22512-PA | 45..226 | 16..204 | 460 | 57.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18975-PA | 218 | GG18975-PA | 1..218 | 1..218 | 1134 | 99.5 | Plus |
Dere\GG18129-PA | 619 | GG18129-PA | 44..228 | 12..204 | 459 | 56.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24907-PA | 217 | GH24907-PA | 1..217 | 1..218 | 1076 | 95.4 | Plus |
Dgri\GH17786-PA | 615 | GH17786-PA | 53..234 | 15..204 | 440 | 56.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32700-PB | 218 | CG32700-PB | 1..218 | 1..218 | 1120 | 100 | Plus |
CG32700-PA | 218 | CG32700-PA | 1..218 | 1..218 | 1120 | 100 | Plus |
CG6123-PB | 614 | CG6123-PB | 44..247 | 12..215 | 458 | 53.7 | Plus |
CG6123-PA | 614 | CG6123-PA | 44..247 | 12..215 | 458 | 53.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15968-PA | 219 | GI15968-PA | 1..219 | 1..218 | 996 | 88.7 | Plus |
Dmoj\GI15129-PA | 607 | GI15129-PA | 48..228 | 16..204 | 433 | 55.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13129-PA | 217 | GL13129-PA | 1..217 | 1..218 | 1032 | 95.9 | Plus |
Dper\GL27042-PA | 608 | GL27042-PA | 35..218 | 13..204 | 451 | 56 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17086-PA | 217 | GA17086-PA | 1..217 | 1..218 | 1032 | 95.9 | Plus |
Dpse\GA19371-PA | 608 | GA19371-PA | 35..218 | 13..204 | 451 | 56 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11362-PA | 218 | GM11362-PA | 1..218 | 1..218 | 1135 | 100 | Plus |
Dsec\GM22822-PA | 616 | GM22822-PA | 39..228 | 7..204 | 453 | 55.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16059-PA | 218 | GD16059-PA | 1..218 | 1..218 | 1135 | 100 | Plus |
Dsim\GD15646-PA | 610 | GD15646-PA | 39..228 | 7..204 | 454 | 55.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18859-PA | 216 | GJ18859-PA | 1..216 | 1..218 | 1061 | 93.1 | Plus |
Dvir\GJ18985-PA | 626 | GJ18985-PA | 66..247 | 15..204 | 433 | 56.1 | Plus |