Clone GH20047 Report

Search the DGRC for GH20047

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:200
Well:47
Vector:pOT2
Associated Gene/Transcriptfus-RB
Protein status:GH20047.pep: gold
Preliminary Size:3865
Sequenced Size:4366

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8205 2001-01-01 Release 2 assignment
CG8205 2002-12-10 Blastp of sequenced clone
CG8205 2003-01-01 Sim4 clustering to Release 3
fus 2008-04-29 Release 5.5 accounting
fus 2008-08-15 Release 5.9 accounting
fus 2008-12-18 5.12 accounting

Clone Sequence Records

GH20047.complete Sequence

4366 bp (4366 high quality bases) assembled on 2002-12-10

GenBank Submission: BT003299

> GH20047.complete
AAGAGCTCGATCGTAGAGCCACATAGCTATAGTGTTTCCACGGGATCGGT
TCTCAGCCGATGGCATCGTGTGGTATCGGGTGGCATTGTAACGGATCAGA
GGCAACGTGAATGCACGGCTCTTGTTATCGCCAGATCGCCTGGAAATATT
GAACTACCTACGGCTCCTAGAGATTGGGGTCTGTTTTCTTTTTTTTTTTT
TTGGTTCCAATCACTATAAAAGTTTCAATTAGCAAGCGACAGAGCTCCAT
AGACGACGAAGTCGACGGTAACTGCATCGTAAGGGCCAGAGGATTGCCCT
GGCAGAGCAGCGACCAGGACATTGCCAAGTTCTTCCGCGGCCTCAACGTA
GCCAAAGGCGGCGTGGCCCTCTGTCTTTCTCCGCTCGGTCGTCGTAACGG
CGAGGCTTTGATACGCTTTGTATGCCAGGAGCATCGCGACATGGCGCTTA
AGCGGCACAAGCACCACATCGGCACCCGCTACATCGAGGTGTACCGGGCA
TCGGGGGAGGATTTTCTGGCCATTGCCGGCGGAGCCTCCAATGAGGCGCA
AGCCTTCCTTTCGAAGGGCGCCCAGGTGATCATTCGCATGCGGGGATTAC
CATACGACGCCACCGCCAAGCAAGTGCTGGACTTCTTCACCACTGGGGAT
ACTCCGCCCTGCCATGTTCTTGACGGGAATGAGGGCGTGCTGTTCGTTAA
GAAGCCGGATGGACGGGCCACGGGTGATGCCTTCGTGCTATTCGCAAACG
AGACGGATGCGCCCAAGGCGCTGGGCCGGCACCGTGAATCCATTGGGCAG
CGGTACATTGAGCTATTCCGTTCCACGACCGCCGAGGTGCAGCAGGTGCT
CAACCGGTCGATGGACCCCAAGAACTATGAGTCGGGCGGTGGGCACAGCC
AGCCGCCGTTGATTGCCCAACTGCCCACGATGCAGCTGCCGCTGCTGCCG
CAGGTGGGTGCCCACAGCCTCAGCCACAGCCTCGGAGCCAGCCCCGCTAA
CCTGTGCCCCCCCGTGCCACCTCCCGCTCTCCCTCTCCCCACACAGCACC
TCATCACCTCGGGCACCACCAAGAACTGCATCCGACTGCGCGGACTGCCC
TACGAGGCGATGGTCGAGCACATTCTGCATTTCCTCGATGACTTTGCAAA
GCACATCATTTATCAAGGTGTCCATATGGTTATCAATGCACAGGGCCAGC
CAAGCGGTGAGGCCTTTATCCAGATGGACTTGGAGGAGTCAGCGCGTCTG
TGTGCTCAGCGCAGGCACAACCATTATATGATGTTCGGCAAGAAGTATCG
GTACATCGAGGTGTTCCAGTGTTCCGGGGACGACATGAACATGGTCCTCA
ACGGAGGTCTGGCCTCACCGGTGGCACAACCACCGCCGCCTCACCTTGGC
CACGCTCACAAGCAGCAATCACTGCTGGCCGCCACTACGGGTATGTTCAG
TTCGGCGGGTCAGTCGCCGACGACCGTAGCCGCCGGTACCGCTCAGTCGC
CGCTGGGCGGCACTCATACACACACTCACCCGCACTCTCATGCGCATGCG
CACGCCACGGGCCACGCCCATGCGGCAGCCGCCGCCGCCCACCACGGATT
GTCCGCCTCATCGGCTATGTTGCCGGGACTTTCGGCTGCCGCTTCCGCAT
CCGGTTTGGCCTCCTTCATGTCAGCTGGTCAGCAGTCGGCAGCTGCAGCT
GCTCATTCCGCTGCTTCGTTGCAAAATGCCGCGGTGGCCTTGGCACCTCA
GGGTTACGCCCTCAATCCTTTCTCGCTGCCGCCGCCAGGATCTGCGGCTG
CTGCAGCAGCTTCCACACCCGCCCTGCTGGCCCAACAACAGGCTCAGTTC
ATAGCCCAGCAAAGTTTGTTGGTGCGACAGCAGGCTGCAGCTGCTGCCTT
GGCCGCTGAACAGCAGCAGCAACAACAGCAGCAGCAACAGCTCTATGCCA
GTGCAATGCTGCAACAGCATCCGCTGTACCTGCAACAGCAGCAGCAACAA
CAGCAACTCTATGCCAGTGCCATGTTGCAACAAGGTCAGCCGCAATTCGT
GCTCATGCAGAGGCCTTCGGCCGCCTACCTGCCGCCCTTTCCGCTCAGCT
ATATGTCAGCAGCGGGGGCGGCATCGGGCGTTGGAGTGGCGCCAGGAGCA
GCAGTTGCTGGAGCGGCAGCAGCCGCATCGCCTTCCGCCAGCAACTCCTC
GCTGAGTCAATCGATGAAGCGCTCGTACGAGAACGCCTTTCAGCAGGAGG
CAGCCGGAGCGGCAGCGGCGGCCAGTGCTGCTAAGCGGGCCTTAACCCGG
CAGCCCAGCAGTGTTTACTCGTACTATAATTCGGGAATCTAGAACCTAGA
TCCGACAAAACCTGAAATAAGAGCTCCACCTCCAGCACTTCGGGCACATT
CCGCGAGTGGGTGGGGCGTTCATATAATACCCTACATTAAGGCGCACACA
TAACCATATCATGTATCATCATGGCCACACTCACACACAACGCATACCAG
GCATTCTCTAGAGCTTAATAATTACCGATTTGGATTGTAGACTTAAGTAC
TTTTCTTGTATGGAGTACTCGTAGTAGCCTAAGCATACTTGTCTATGGTC
TAAGCGAATCATACTTACTATAATTAATATACAACGATACACACACACGC
GGGCACTCACACACACACGCACACACACCAGAAAGCACTGCTCACCCATA
CACGCATAAGTAGTTCAGCTAACAGAGGGCATTTTGGAAATGATCAAGGT
ATCCTGATCAATTAAGCATTCCATAACAATGGACTTATATTTGTTTATTT
CGATGTATGCTTGGTGTGTGTGTGCGTGCGCGCGTGTTTTTTAGGGGCAG
GAGAACGTATATATCTTGAGATTATATATATATATCTCCTCGACTGTCCC
CCTATTCGAAGGCAATCAACAGAGGCTAACGTGGTTCAATGGGGCAGGGA
GTTCTTATTGGTGGCTCGGTGGCCACCAAGCTCATTTAGTGCAATCTAAT
TTTAGTGTTTACCCTTTGTAATCCTGTTTATAATATAGCCACTTGGCGCC
CGCCATAAGATCCCCTCCCTCCGTGAACCACGTCAGGTGTTGGCTCAAGC
GCAAATTAAAACTGAATTTTGAGACGAAAATCGAAACCCGCAACTGTTTA
CGGGATAACACGAGTAAAGCGAATATCACGAAACCCTGTTTTGTTAGACA
AACGATTTGGATTAACCATCGATGGGTGGAGTTGCGTGCCTATCGACTTA
TGCATATTTATATACCTACATTTATACACGCTAGCCTTAAGTTTGTGCGA
TTTGTGAAATGGGATTGCATTTTAATTCTAGCGGCGATCTTTTCCCGTGT
CTCTCCATGGCAGCTAACAATCAATTATTAATAATCTCATCGTCTGACTT
GCAATATCGTACACCCTATAAATACATAGTGCCTAGATCTATGGTGTAGC
TCTTAAGTGTGCGTAACTGGTGTTAGTCGCAAATGGGATAGTTCTCTCTA
CTATATCACTCTCTACCTCTTGATATCAATACCTCTCACTGTTTGTGTGT
TCTCTGTCATCACTAATTTATTCGGGATCAGCTAGATCTATAGTCTAAAG
CTTGTTGTAAGTTGCGGCGCTTTAGTGTCTATATACATATATAGTGTGAC
TAGTCTACATAATCGGATAACTGATAACTGGTTACTGGTGACTCGGGCTT
ACAATCCTGCAAATTGCTCGTTAGCTTTAAGACTGTCTTAACTCTTGAGA
AGTAACTATTTTGAAACGATATGATAATGAGAAGTCAACCAAATTATAAT
ATACAATTCGGCGTAGCTCACTAGGTATTTAGAAATCTGCAATATATGAT
AAGGAACATCTCGTGAGTTAAGATAGGAATTCAGTTAATGAGCATTTTGT
TCAATTCTTACACAAACAGGAGCTTTTGTCAGCGTCTTTCGGATTCCGAA
TTCCCCAACCTACCGAATCCCCCAAAACCAAAATCCATATATCCACCTCT
GTCTTCTCCTGCTGCGTCTAACACTAAGTTTCGCTCGGCTTGGGAAGATC
GAGCTTAGCGAGGGAAAGGCATGGGAAAGATAGTCTGCGCCTGGCCTAAT
CCTTAGCCTAATTTAACCTTTAGTCTTACGTAGAATGGCAATCAAGTGGC
TTCCGAGCGGGTTAAACGGCCACTTTAAAGAAACAACACATAATCAATTG
TATCTACTTAACTAGTTTGTACGCACAGCAGTTTTAATGTTTTTTGGAAA
TTTTACGATTTTTGATATTCCATTCTTTTTTACCACTAGATGTTAGTAAA
AAAATCTTTGATTAATTTTTTACATCAATAAAATACGACATATCGCCTAA
AAAAAAAAAAAAAAAA

GH20047.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:31:18
Subject Length Description Subject Range Query Range Score Percent Strand
fus.h 5516 fus.h 1..4352 1..4351 21720 99.9 Plus
fus-RB 4353 fus-RB 1..4352 1..4351 21720 99.9 Plus
fus.g 5449 fus.g 178..4285 244..4351 20540 100 Plus
fus.g 5449 fus.g 1..178 1..178 890 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:23:42
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 11547223..11550379 4348..1192 15770 100 Minus
chr2R 21145070 chr2R 11550438..11551006 1194..626 2845 100 Minus
chr2R 21145070 chr2R 11551126..11551400 626..352 1345 99.3 Minus
chr2R 21145070 chr2R 11552031..11552275 244..1 1175 99.6 Minus
chr2R 21145070 chr2R 11551531..11551643 355..243 565 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:00:12 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:23:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15660013..15663172 4351..1192 15800 100 Minus
2R 25286936 2R 15663231..15663799 1194..626 2845 100 Minus
2R 25286936 2R 15663919..15664193 626..352 1360 99.6 Minus
2R 25286936 2R 15664824..15665068 244..1 1175 99.6 Minus
2R 25286936 2R 15664324..15664436 355..243 565 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:07:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 15661212..15664371 4351..1192 15800 100 Minus
2R 25260384 2R 15664430..15664998 1194..626 2845 100 Minus
2R 25260384 2R 15665118..15665392 626..352 1360 99.6 Minus
2R 25260384 2R 15666023..15666267 244..1 1185 99.5 Minus
2R 25260384 2R 15665523..15665635 355..243 565 100 Minus
Blast to na_te.dros performed 2019-03-15 22:23:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6727..6911 1874..2064 266 64.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2275..2461 1857..2044 264 64.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6855 1910..2044 258 70 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6929 1804..2013 253 61.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6738..6829 1909..2006 251 76.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6748..6881 1874..2007 247 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6757..6896 1874..2007 243 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2403 1911..2007 241 74.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2490 1824..2007 237 61.8 Plus
roo 9092 roo DM_ROO 9092bp 1065..1157 1909..2007 229 73.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2764..2885 1909..2033 186 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2628..2838 1786..2001 184 57.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2540 1800..2033 183 59.8 Plus
Doc3-element 4740 Doc3-element DOC3 4740bp 513..637 1885..2002 175 64.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6690..6797 1892..2007 174 65.5 Plus
roo 9092 roo DM_ROO 9092bp 1059..1177 1915..2034 173 64.8 Plus
Doc3-element 4740 Doc3-element DOC3 4740bp 484..588 1918..2021 170 67.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2587..2882 1918..2210 167 56.5 Plus
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 602..760 2035..1874 163 63.3 Minus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3228..3315 1914..2007 159 67 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2724..2851 1912..2044 157 64 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6779..7004 1786..2007 155 57 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6717..6820 1944..2045 153 65.7 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 96..195 1889..1996 149 67.6 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 9126..9225 1889..1996 149 67.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2327..2376 1958..2007 142 76 Plus
BS 5142 BS BS 5142bp 2012..2119 1914..2012 142 64.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1610 1917..2016 141 67.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2322..2367 1962..2007 140 78.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2254..2352 1909..2007 135 62.4 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 862..1012 1851..2008 135 58.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2376..2532 1786..1941 133 56.3 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 124..173 1958..2007 133 74 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 9154..9203 1958..2007 133 74 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1530..1578 1959..2007 128 73.5 Plus
roo 9092 roo DM_ROO 9092bp 1055..1088 1974..2007 125 85.3 Plus
Dsub\GEM 1730 Dsub\GEM GEM 1730bp 1301..1379 2769..2839 125 67.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6731..6947 1983..2210 123 55.2 Plus
roo 9092 roo DM_ROO 9092bp 1055..1103 1959..2007 119 71.4 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 917..999 1924..2007 119 66.3 Plus

GH20047.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:24:39 Download gff for GH20047.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 11547223..11550377 1194..4348 96 <- Minus
chr2R 11550439..11551005 627..1193 100 <- Minus
chr2R 11551126..11551396 356..626 99 <- Minus
chr2R 11551531..11551641 245..355 100 <- Minus
chr2R 11552031..11552275 1..244 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:49:58 Download gff for GH20047.complete
Subject Subject Range Query Range Percent Splice Strand
fus-RD 800..2904 238..2342 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:02:22 Download gff for GH20047.complete
Subject Subject Range Query Range Percent Splice Strand
fus-RD 800..2904 238..2342 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:17:45 Download gff for GH20047.complete
Subject Subject Range Query Range Percent Splice Strand
fus-RE 800..2904 238..2342 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:52:44 Download gff for GH20047.complete
Subject Subject Range Query Range Percent Splice Strand
fus-RD 800..2904 238..2342 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:20:33 Download gff for GH20047.complete
Subject Subject Range Query Range Percent Splice Strand
fus-RE 800..2904 238..2342 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:20:28 Download gff for GH20047.complete
Subject Subject Range Query Range Percent Splice Strand
fus-RB 1..4349 1..4348 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:02:22 Download gff for GH20047.complete
Subject Subject Range Query Range Percent Splice Strand
fus-RB 1..4349 1..4348 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:17:45 Download gff for GH20047.complete
Subject Subject Range Query Range Percent Splice Strand
fus-RB 27..4375 1..4348 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:52:44 Download gff for GH20047.complete
Subject Subject Range Query Range Percent Splice Strand
fus-RB 1..4349 1..4348 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:20:33 Download gff for GH20047.complete
Subject Subject Range Query Range Percent Splice Strand
fus-RB 27..4375 1..4348 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:24:39 Download gff for GH20047.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15660016..15663170 1194..4348 100 <- Minus
2R 15663232..15663798 627..1193 100 <- Minus
2R 15663919..15664189 356..626 100 <- Minus
2R 15664324..15664434 245..355 100 <- Minus
2R 15664824..15665068 1..244 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:24:39 Download gff for GH20047.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15660016..15663170 1194..4348 100 <- Minus
2R 15663232..15663798 627..1193 100 <- Minus
2R 15663919..15664189 356..626 100 <- Minus
2R 15664324..15664434 245..355 100 <- Minus
2R 15664824..15665068 1..244 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:24:39 Download gff for GH20047.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15660016..15663170 1194..4348 100 <- Minus
2R 15663232..15663798 627..1193 100 <- Minus
2R 15663919..15664189 356..626 100 <- Minus
2R 15664324..15664434 245..355 100 <- Minus
2R 15664824..15665068 1..244 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:17:45 Download gff for GH20047.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11551829..11551939 245..355 100 <- Minus
arm_2R 11547521..11550675 1194..4348 100 <- Minus
arm_2R 11550737..11551303 627..1193 100 <- Minus
arm_2R 11551424..11551694 356..626 100 <- Minus
arm_2R 11552329..11552573 1..244 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:24:47 Download gff for GH20047.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15661215..15664369 1194..4348 100 <- Minus
2R 15664431..15664997 627..1193 100 <- Minus
2R 15665118..15665388 356..626 100 <- Minus
2R 15665523..15665633 245..355 100 <- Minus
2R 15666023..15666267 1..244 99   Minus

GH20047.hyp Sequence

Translation from 0 to 2341

> GH20047.hyp
KSSIVEPHSYSVSTGSVLSRWHRVVSGGIVTDQRQRECTALVIARSPGNI
ELPTAPRDWGLFSFFFFLVPITIKVSISKRQSSIDDEVDGNCIVRARGLP
WQSSDQDIAKFFRGLNVAKGGVALCLSPLGRRNGEALIRFVCQEHRDMAL
KRHKHHIGTRYIEVYRASGEDFLAIAGGASNEAQAFLSKGAQVIIRMRGL
PYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVLFAN
ETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMDPKNYESGGGHS
QPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLPTQH
LITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINAQGQ
PSGEAFIQMDLEESARLCAQRRHNHYMMFGKKYRYIEVFQCSGDDMNMVL
NGGLASPVAQPPPPHLGHAHKQQSLLAATTGMFSSAGQSPTTVAAGTAQS
PLGGTHTHTHPHSHAHAHATGHAHAAAAAAHHGLSASSAMLPGLSAAASA
SGLASFMSAGQQSAAAAAHSAASLQNAAVALAPQGYALNPFSLPPPGSAA
AAAASTPALLAQQQAQFIAQQSLLVRQQAAAAALAAEQQQQQQQQQQLYA
SAMLQQHPLYLQQQQQQQQLYASAMLQQGQPQFVLMQRPSAAYLPPFPLS
YMSAAGAASGVGVAPGAAVAGAAAAASPSASNSSLSQSMKRSYENAFQQE
AAGAAAAASAAKRALTRQPSSVYSYYNSGI*

GH20047.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 10:13:07
Subject Length Description Subject Range Query Range Score Percent Strand
fus-PD 967 CG8205-PD 270..967 83..780 3579 100 Plus
fus-PF 967 CG8205-PF 270..967 83..780 3579 100 Plus
fus-PE 967 CG8205-PE 270..967 83..780 3579 100 Plus
fus-PB 633 CG8205-PB 1..633 148..780 3234 100 Plus
fus-PC 891 CG8205-PC 270..709 83..514 2128 93.2 Plus

GH20047.pep Sequence

Translation from 440 to 2341

> GH20047.pep
MALKRHKHHIGTRYIEVYRASGEDFLAIAGGASNEAQAFLSKGAQVIIRM
RGLPYDATAKQVLDFFTTGDTPPCHVLDGNEGVLFVKKPDGRATGDAFVL
FANETDAPKALGRHRESIGQRYIELFRSTTAEVQQVLNRSMDPKNYESGG
GHSQPPLIAQLPTMQLPLLPQVGAHSLSHSLGASPANLCPPVPPPALPLP
TQHLITSGTTKNCIRLRGLPYEAMVEHILHFLDDFAKHIIYQGVHMVINA
QGQPSGEAFIQMDLEESARLCAQRRHNHYMMFGKKYRYIEVFQCSGDDMN
MVLNGGLASPVAQPPPPHLGHAHKQQSLLAATTGMFSSAGQSPTTVAAGT
AQSPLGGTHTHTHPHSHAHAHATGHAHAAAAAAHHGLSASSAMLPGLSAA
ASASGLASFMSAGQQSAAAAAHSAASLQNAAVALAPQGYALNPFSLPPPG
SAAAAAASTPALLAQQQAQFIAQQSLLVRQQAAAAALAAEQQQQQQQQQQ
LYASAMLQQHPLYLQQQQQQQQLYASAMLQQGQPQFVLMQRPSAAYLPPF
PLSYMSAAGAASGVGVAPGAAVAGAAAAASPSASNSSLSQSMKRSYENAF
QQEAAGAAAAASAAKRALTRQPSSVYSYYNSGI*

GH20047.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:30:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13378-PA 885 GF13378-PA 338..643 1..333 1450 82.2 Plus
Dana\GF16612-PA 600 GF16612-PA 112..232 2..134 240 40.1 Plus
Dana\GF16612-PA 600 GF16612-PA 53..141 47..139 162 35.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:30:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22342-PA 892 GG22342-PA 335..668 1..334 1720 98.5 Plus
Dere\GG17187-PA 595 GG17187-PA 109..229 2..134 240 39.8 Plus
Dere\GG17187-PA 595 GG17187-PA 50..138 47..139 158 35.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:30:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22967-PA 1007 GH22967-PA 335..1007 1..633 1652 63.4 Plus
Dgri\GH18272-PA 622 GH18272-PA 121..242 2..135 242 40.6 Plus
Dgri\GH18272-PA 622 GH18272-PA 62..151 47..140 167 35.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:07:24
Subject Length Description Subject Range Query Range Score Percent Strand
fus-PD 967 CG8205-PD 335..967 1..633 3234 100 Plus
fus-PF 967 CG8205-PF 335..967 1..633 3234 100 Plus
fus-PB 633 CG8205-PB 1..633 1..633 3234 100 Plus
fus-PE 967 CG8205-PE 335..967 1..633 3234 100 Plus
fus-PC 891 CG8205-PC 335..709 1..367 1783 92 Plus
fus-PA 557 CG8205-PA 1..375 1..367 1783 92 Plus
fus-PH 526 CG8205-PH 1..344 1..367 1572 83.7 Plus
fus-PG 860 CG8205-PG 335..678 1..367 1572 83.7 Plus
glo-PA 586 CG6946-PA 109..230 2..135 241 40.3 Plus
glo-PB 586 CG6946-PB 109..230 2..135 241 40.3 Plus
CG34383-PJ 1308 CG34383-PJ 55..369 305..624 193 27.1 Plus
CG34383-PH 1974 CG34383-PH 55..369 305..624 193 27.1 Plus
CG34383-PB 1974 CG34383-PB 55..369 305..624 193 27.1 Plus
CG34383-PK 2020 CG34383-PK 55..369 305..624 193 27.1 Plus
CG34383-PF 2020 CG34383-PF 55..369 305..624 193 27.1 Plus
CG34383-PD 2020 CG34383-PD 55..369 305..624 193 27.1 Plus
CG34383-PL 2037 CG34383-PL 77..391 305..624 193 27.1 Plus
CG34383-PG 2042 CG34383-PG 77..391 305..624 193 27.1 Plus
CG34383-PE 2050 CG34383-PE 55..369 305..624 193 27.1 Plus
CG34383-PI 3090 CG34383-PI 55..369 305..624 193 27.1 Plus
Rbfox1-PF 763 CG32062-PF 472..686 415..624 186 32.3 Plus
Rbfox1-PL 858 CG32062-PL 489..703 415..624 186 32.3 Plus
Rbfox1-PE 865 CG32062-PE 472..686 415..624 186 32.3 Plus
Rbfox1-PJ 889 CG32062-PJ 538..752 415..624 186 32.3 Plus
Rbfox1-PK 921 CG32062-PK 552..766 415..624 186 32.3 Plus
Rbfox1-PH 962 CG32062-PH 569..783 415..624 186 32.3 Plus
ovo-PA 975 CG6824-PA 326..505 447..613 171 33.9 Plus
ovo-PD 1028 CG6824-PD 379..558 447..613 171 33.9 Plus
ovo-PC 1222 CG6824-PC 751..930 447..613 171 33.9 Plus
ovo-PE 1351 CG6824-PE 880..1059 447..613 171 33.9 Plus
ovo-PB 1351 CG6824-PB 880..1059 447..613 171 33.9 Plus
cpo-PY 606 CG43738-PY 140..382 359..617 167 29.5 Plus
cpo-PX 606 CG43738-PX 140..382 359..617 167 29.5 Plus
cpo-PW 606 CG43738-PW 140..382 359..617 167 29.5 Plus
cpo-PU 606 CG43738-PU 140..382 359..617 167 29.5 Plus
cpo-PN 606 CG43738-PN 140..382 359..617 167 29.5 Plus
cpo-PV 607 CG43738-PV 140..382 359..617 167 29.5 Plus
cpo-PT 607 CG43738-PT 140..382 359..617 167 29.5 Plus
cpo-PO 748 CG43738-PO 140..382 359..617 167 29.5 Plus
cpo-PR 749 CG43738-PR 140..382 359..617 167 29.5 Plus
cpo-PQ 762 CG43738-PQ 140..382 359..617 167 29.5 Plus
cpo-PP 841 CG43738-PP 140..382 359..617 167 29.5 Plus
cpo-PS 962 CG43738-PS 140..382 359..617 167 29.5 Plus
CG32532-PD 688 CG32532-PD 122..286 414..588 166 34 Plus
glo-PA 586 CG6946-PA 51..138 48..139 158 35.5 Plus
glo-PB 586 CG6946-PB 51..138 48..139 158 35.5 Plus
glo-PC 179 CG6946-PC 51..138 48..139 158 35.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:30:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18454-PA 1008 GI18454-PA 358..675 1..323 1468 85.6 Plus
Dmoj\GI24079-PA 605 GI24079-PA 119..240 2..135 241 40.6 Plus
Dmoj\GI24079-PA 605 GI24079-PA 60..149 47..140 167 36.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:30:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11864-PA 830 GL11864-PA 354..489 1..137 686 93.4 Plus
Dper\GL11864-PA 830 GL11864-PA 490..589 203..302 549 93 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:30:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20896-PB 1186 GA20896-PB 354..954 1..632 1856 71.8 Plus
Dpse\GA20896-PC 602 GA20896-PC 1..602 1..633 1844 71.9 Plus
Dpse\GA20896-PD 557 GA20896-PD 1..323 1..330 1504 85.3 Plus
Dpse\GA20896-PA 910 GA20896-PA 354..677 1..331 1499 85.1 Plus
Dpse\GA27490-PA 610 GA27490-PA 112..233 2..135 246 40.6 Plus
Dpse\GA27490-PA 610 GA27490-PA 53..227 47..295 160 24.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:30:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20128-PA 885 GM20128-PA 328..661 1..334 1743 99.4 Plus
Dsec\GM26067-PA 563 GM26067-PA 109..229 2..134 241 39.8 Plus
Dsec\GM26067-PA 563 GM26067-PA 50..138 47..139 159 35.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:30:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25607-PA 628 GD25607-PA 335..403 1..69 368 98.6 Plus
Dsim\GD20630-PA 587 GD20630-PA 109..229 2..134 241 39.8 Plus
Dsim\GD20630-PA 587 GD20630-PA 50..138 47..139 159 35.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:30:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21539-PA 982 GJ21539-PA 335..683 1..354 1468 80.2 Plus
Dvir\GJ10899-PA 615 GJ10899-PA 121..242 2..135 241 40.6 Plus
Dvir\GJ10899-PA 615 GJ10899-PA 62..151 47..140 169 36.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:30:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17961-PA 864 GK17961-PA 350..695 1..358 1511 81.3 Plus
Dwil\GK11105-PA 642 GK11105-PA 114..235 2..135 246 41.6 Plus
Dwil\GK11105-PA 642 GK11105-PA 55..143 47..139 164 36.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:30:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14142-PA 889 GE14142-PA 335..668 1..334 1717 98.2 Plus
Dyak\GE10080-PA 597 GE10080-PA 110..230 2..134 240 39.8 Plus
Dyak\GE10080-PA 597 GE10080-PA 51..139 47..139 160 35.1 Plus