BDGP Sequence Production Resources |
Search the DGRC for GH20064
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 200 |
Well: | 64 |
Vector: | pOT2 |
Associated Gene/Transcript | CG12375-RA |
Protein status: | GH20064.pep: gold |
Preliminary Size: | 1283 |
Sequenced Size: | 1143 |
Gene | Date | Evidence |
---|---|---|
CG12375 | 2001-01-01 | Release 2 assignment |
CG12375 | 2002-06-12 | Blastp of sequenced clone |
CG12375 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12375 | 2008-04-29 | Release 5.5 accounting |
CG12375 | 2008-08-15 | Release 5.9 accounting |
CG12375 | 2008-12-18 | 5.12 accounting |
1143 bp (1143 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122121
> GH20064.complete CCAAAGTTCATTAAAACCCCGAAAAAATTGGACCCTAATATTATTTTCCT TAAGTGTTTCATTTCCCTCCTTAATTTATATTTAGTGAACGAAGAGATGG CGCTGATTCCGGCTGTTACCAGACTCACCTCCTCCGTAATTCGGATACTG GGTTGTAATCCCAGTGCCATGACGCTCCAGGGCACCAATACGTACCTCCT CGGCAGTGGCAGTAGGAGAATCTTGATCGACACTGGTGACGAAGACGTGC CGCAGTACATCGCTCACCTGGGAGATGTGCTACAGCAGGAAAAGGCCTCC ATCGACACCATCCTGCTGACCCACTGGCACCACGACCATGTCGGCGGTGT AAAGAGCATTGTGGGTACTAAATTGGCCGAAAAGGATTGCCGCGTATTCA AGTTTGGGCGTACAGATGCTCCAGATGTGTGCCCCGAGATACCGACGGAT ATCAAACTCCATCCGCTAGCACACAACCAAGAGTTCACCACGGAGGGGGC GAATGTGCGGGTGGTTCACACACCCGGTCACACCACTGATCATGTGGTGC TGGCCATGAACGAGGGCACACTCTTCAGCGGCGATTGCATCCTTGGCGAG GGCACCGCCGTCTTCGAGGACCTATTTGAGTACATGAAAAGCCTGGAGAA GATACTAGACATCAAGCCGCAGCGTATCTTTCCAGGCCATGGCAATGTCA TTGAGGAACCAATTGGCAAGATTGAGTACTACATTAACCATCGCAACCAG CGAGAACAGCAAATCCTGCAGTTCTTCGTTCAGCGGCCCAACGAAAACTT GCAGGCTATGGACGTCGTGAAGGTGGTCTACAAGGAGACACCAGAAAACC TCTGGCCCGCCGCCGCCTATAACGTGAACCACCACCTAAGCAAGCTGGAG AAGGAGGGAAAGCTGCGGGTCAGCAAGTCTGCGGATGAAGAGTTCTATGT GTACCAGCCAACCAGTGCGCTCTAAATTCTTGATTTTCCTTTTTTATTTT GTTGAGCGTATATAACTATTTGTTTGTAAAAAATTGTTAAATAATTTTCA TTTTCTTTATACCTGGTTATCACACTTTATGGTGTCGTCTAATAACATAT TCCACAAGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 8124700..8125730 | 80..1110 | 99 | <- | Minus |
chr2L | 8125789..8125867 | 1..79 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12375-RA | 1..879 | 97..975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12375-RA | 1..879 | 97..975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12375-RA | 1..879 | 97..975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12375-RA | 1..879 | 97..975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12375-RA | 1..879 | 97..975 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12375-RA | 25..1134 | 1..1110 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12375-RA | 42..1151 | 1..1110 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12375-RA | 56..1165 | 1..1110 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12375-RA | 25..1134 | 1..1110 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12375-RA | 56..1165 | 1..1110 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8125668..8126698 | 80..1110 | 100 | <- | Minus |
2L | 8126757..8126835 | 1..79 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8125668..8126698 | 80..1110 | 100 | <- | Minus |
2L | 8126757..8126835 | 1..79 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8125668..8126698 | 80..1110 | 100 | <- | Minus |
2L | 8126757..8126835 | 1..79 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 8125668..8126698 | 80..1110 | 100 | <- | Minus |
arm_2L | 8126757..8126835 | 1..79 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8125668..8126698 | 80..1110 | 100 | <- | Minus |
2L | 8126757..8126835 | 1..79 | 100 | Minus |
Translation from 0 to 974
> GH20064.hyp PKFIKTPKKLDPNIIFLKCFISLLNLYLVNEEMALIPAVTRLTSSVIRIL GCNPSAMTLQGTNTYLLGSGSRRILIDTGDEDVPQYIAHLGDVLQQEKAS IDTILLTHWHHDHVGGVKSIVGTKLAEKDCRVFKFGRTDAPDVCPEIPTD IKLHPLAHNQEFTTEGANVRVVHTPGHTTDHVVLAMNEGTLFSGDCILGE GTAVFEDLFEYMKSLEKILDIKPQRIFPGHGNVIEEPIGKIEYYINHRNQ REQQILQFFVQRPNENLQAMDVVKVVYKETPENLWPAAAYNVNHHLSKLE KEGKLRVSKSADEEFYVYQPTSAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12375-PA | 292 | CG12375-PA | 1..292 | 33..324 | 1536 | 100 | Plus |
Translation from 96 to 974
> GH20064.pep MALIPAVTRLTSSVIRILGCNPSAMTLQGTNTYLLGSGSRRILIDTGDED VPQYIAHLGDVLQQEKASIDTILLTHWHHDHVGGVKSIVGTKLAEKDCRV FKFGRTDAPDVCPEIPTDIKLHPLAHNQEFTTEGANVRVVHTPGHTTDHV VLAMNEGTLFSGDCILGEGTAVFEDLFEYMKSLEKILDIKPQRIFPGHGN VIEEPIGKIEYYINHRNQREQQILQFFVQRPNENLQAMDVVKVVYKETPE NLWPAAAYNVNHHLSKLEKEGKLRVSKSADEEFYVYQPTSAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15132-PA | 292 | GF15132-PA | 1..292 | 1..292 | 1385 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23476-PA | 292 | GG23476-PA | 1..292 | 1..292 | 1517 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17641-PA | 292 | GH17641-PA | 1..292 | 1..292 | 1189 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12375-PA | 292 | CG12375-PA | 1..292 | 1..292 | 1536 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16080-PA | 297 | GI16080-PA | 1..297 | 1..292 | 1111 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22417-PA | 292 | GL22417-PA | 1..290 | 1..290 | 1250 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11591-PA | 292 | GA11591-PA | 1..290 | 1..290 | 1244 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13170-PA | 292 | GM13170-PA | 1..292 | 1..292 | 1544 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22440-PA | 292 | GD22440-PA | 1..292 | 1..292 | 1541 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15728-PA | 292 | GJ15728-PA | 1..292 | 1..292 | 1241 | 77.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20116-PA | 293 | GK20116-PA | 1..293 | 1..292 | 1226 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11184-PA | 292 | GE11184-PA | 1..292 | 1..292 | 1516 | 96.2 | Plus |