BDGP Sequence Production Resources |
Search the DGRC for GH20077
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 200 |
Well: | 77 |
Vector: | pOT2 |
Associated Gene/Transcript | CG10209-RA |
Protein status: | GH20077.pep: gold |
Preliminary Size: | 2085 |
Sequenced Size: | 2038 |
Gene | Date | Evidence |
---|---|---|
CG10209 | 2001-01-01 | Release 2 assignment |
CG10209 | 2001-09-19 | Blastp of sequenced clone |
CG10209 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10209 | 2008-04-29 | Release 5.5 accounting |
CG10209 | 2008-08-15 | Release 5.9 accounting |
CG10209 | 2008-12-18 | 5.12 accounting |
2038 bp (2038 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058423
> GH20077.complete CGGACAGAAGAAGAAGAACGAAAGGCAGCAACAGCAATGTTTGAGGGAGT GAAAAATTAAACAAAAGTCCCCGGAATTCAGCAGCAAAAACTCGACGGCG GTTGAAAAACAAAACATCAAGATTTCGAGCCAACGCAGACTGCTTCAAAA GCTCACCATGGATCGAGTGACCAAGCCGCAGAAGAAGATGCTCATCACAC TGCTGCGGGAAACCAAGTACATGGAGGGCAAAAAGGAGAAGGAGTGGTAT TGGGAGAAGATCCAAGCGGCCCTTAATACTATTGGTCCCAAGAAGACGAT TATTCAGTGGAAAAAGTGCTGGCGCGATATGCGACTGACCACAAGGAAAA AGCTGGCGGAACTGAAGCGCTGTCAACTCTCTGGAGGATCTCCACCACCG GGGATCGAACTAAACCAGGAGGACAACGATATCATCGACATTGTGGGCAC CGAGTACTTCTACGAGGAGATGAATGGTGAGCTCAAGGCGGAGAACTTCT TGACCGGCTTGGACTACGCCCCGGAGCATCTGTGCGATGCTATTCTCACG GCAGCAGTGGGCCATCACCAGCACAATATGCAGCACCAGAAGGATCCGCA ATCGCATGCAGGGCAACAGCAGCAGCAGGATCATCACACCAACGATGGCG AAACCAATGATGCTCCTGGATCAAGCAATGGTGGCTCATATCAGGGACAC CCAGTATCCCAGTTGCAGGCGCACAATGGCAGCGGTGGAGGAGGCGAGCA TAGCGGCGGTGGTCAATCCCACTCCGGAATGCTCCAGCACCCTGCTTTTC ACGGTGGCTTGCATCCACACCTGTTGAGGCGCCAGCATGGAAGTGGATCA CTATCCAGAGAGTCGCCATTTGAGGAGAAGCTTCTGCAGTTCATGCAGGA TGCATTTCCAAAAAAGAGCAAGAAGCGCAAGAACCGGGATCCCGACAAGC TGTTCCTCTTATCCCTGTACGAAGAGATCAAGAGAGTTCCGGAGGAGATA CGCCTTGATGTAAAGTCCGAACTAATGCAGATACTGAAGAAGTATCAGAA GAAGTCGCCTGTCAAAGCGGAGAAGCCCGCGCCCTCCTCTACGTCAACCT CCTCAAAACTCAGCTCTAGCAGCAGTGGCAGTAGCACGGTGACTACTCAC TTGTCCCACAGCATGTACCAGTTGCAAAAGAAATACGAAAAGGGCGAGCG TGAACCATCGCCTCAATCACAGGTAGAGCGAGTAGCATCTGCAGGCGCAG TTGCTGTGCCCATTCATACCTCCCAGCAGCTGCCTCTTTTCCAACTTCAG AAGAAGTACGAGGAGAACAGCGTGGAGAAGGTTCATCAGCAGCAACAGCA ACAGCAAAGCGAGCAACGCAAGCATGTGGAGGCCGCTCAGGCCCTTCATG CTGCCCACCAGCAACCGCCTCCACCGCCACCCAATGAGCACCTGCACCAC CCCCAGATGGCCCACAACATCATGTTTCCGCTGGGACAGCTTCGCAACGA GCAGCCGACCGCACAGCAACACCAGCATGGCCACAATCCCCACCAGCAAC AGCAACAGCATCCCCACCAGCAGCAGCAACAGGGACAGCAACACCATCCG CCAACGATCTTCGGATCGACCGCCAGCGAACGGCCTCCAATGTCCTACGA AAATGTCGGATGAGTCCTGAGCCGTCTGTGGGAAGCCACTTGTGGAGCAC CACGCCCTGCGACGGTGTCCCCCACGACGGCAGACGCGCACAGCTGTTAG CCCTCGATTTAGACGGCAATTCGTAGGTCTCATTCTTATGCTAGCCTATA CCTAAGTACACATTGCTCACTACACTACTACAGTCAAAAATGGTGCAGTC AATGAGGAAGATACTCCTGATGTATGCCATTTTGTAGTAAGTGGATGCCG TGATCCTCATGTAAATGTTCCCGTGGCAATAACAGCGTAGCTCAACTGTG ACTCAAGTTCTCAATAGATCGCGACGCATACATTTTTTCGGTGTAAATAC AAATATAATTGAATCTTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10209-RA | 2145 | CG10209-RA | 71..2092 | 1..2022 | 10110 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 10733381..10735083 | 2017..315 | 8455 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 10735522..10735682 | 161..1 | 790 | 99.4 | Minus |
chr2R | 21145070 | chr2R | 10735133..10735289 | 316..160 | 785 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 14846059..14847766 | 2022..315 | 8540 | 100 | Minus |
2R | 25286936 | 2R | 14848199..14848359 | 161..1 | 805 | 100 | Minus |
2R | 25286936 | 2R | 14847816..14847972 | 316..160 | 785 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 14847258..14848965 | 2022..315 | 8540 | 100 | Minus |
2R | 25260384 | 2R | 14849398..14849558 | 161..1 | 805 | 100 | Minus |
2R | 25260384 | 2R | 14849015..14849171 | 316..160 | 785 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2326..2549 | 1326..1545 | 227 | 59.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6752..7057 | 1274..1582 | 203 | 56.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2281..2652 | 1234..1601 | 202 | 55.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6683..7018 | 1260..1603 | 194 | 55.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6985 | 1334..1596 | 189 | 58.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2628..2871 | 1334..1595 | 184 | 59.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6952 | 1335..1582 | 179 | 57.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6705..7042 | 1257..1597 | 175 | 55.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2590..2838 | 1335..1595 | 172 | 58.6 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1056..1176 | 544..656 | 161 | 65.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2587..2682 | 1500..1598 | 155 | 65 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6775..6872 | 548..643 | 150 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2746..2846 | 1290..1390 | 145 | 63.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2313..2396 | 563..645 | 137 | 67.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6755..6828 | 563..636 | 135 | 68 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2342..2450 | 548..657 | 133 | 60.4 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1057..1147 | 1270..1357 | 133 | 67 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2445..2526 | 563..643 | 128 | 63.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2780..2950 | 556..723 | 128 | 56.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2312..2387 | 580..657 | 124 | 65.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6803 | 562..643 | 124 | 62.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2318..2535 | 1155..1373 | 121 | 54.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2720..2835 | 533..643 | 116 | 60.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2765..2832 | 562..626 | 116 | 67.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6809..6901 | 552..645 | 116 | 61.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 10733381..10733801 | 1597..2017 | 100 | == | Minus |
chr2R | 10733858..10735081 | 317..1540 | 99 | <- | Minus |
chr2R | 10735133..10735288 | 161..316 | 100 | <- | Minus |
chr2R | 10735523..10735682 | 1..160 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10209-RA | 1..1506 | 158..1663 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10209-RA | 1..1506 | 158..1663 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10209-RB | 1..1593 | 158..1750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10209-RA | 1..1506 | 158..1663 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10209-RB | 1..1593 | 158..1750 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10209-RA | 1..2017 | 1..2017 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10209-RA | 1..2017 | 1..2017 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10209-RA | 8..2024 | 1..2017 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10209-RA | 1..2017 | 1..2017 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10209-RA | 8..2024 | 1..2017 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14846064..14847764 | 317..2017 | 100 | <- | Minus |
2R | 14847816..14847971 | 161..316 | 100 | <- | Minus |
2R | 14848200..14848359 | 1..160 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14846064..14847764 | 317..2017 | 100 | <- | Minus |
2R | 14847816..14847971 | 161..316 | 100 | <- | Minus |
2R | 14848200..14848359 | 1..160 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14846064..14847764 | 317..2017 | 100 | <- | Minus |
2R | 14847816..14847971 | 161..316 | 100 | <- | Minus |
2R | 14848200..14848359 | 1..160 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 10735705..10735864 | 1..160 | 100 | Minus | |
arm_2R | 10733569..10735269 | 317..2017 | 100 | <- | Minus |
arm_2R | 10735321..10735476 | 161..316 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14847263..14848963 | 317..2017 | 100 | <- | Minus |
2R | 14849015..14849170 | 161..316 | 100 | <- | Minus |
2R | 14849399..14849558 | 1..160 | 100 | Minus |
Translation from 157 to 1662
> GH20077.pep MDRVTKPQKKMLITLLRETKYMEGKKEKEWYWEKIQAALNTIGPKKTIIQ WKKCWRDMRLTTRKKLAELKRCQLSGGSPPPGIELNQEDNDIIDIVGTEY FYEEMNGELKAENFLTGLDYAPEHLCDAILTAAVGHHQHNMQHQKDPQSH AGQQQQQDHHTNDGETNDAPGSSNGGSYQGHPVSQLQAHNGSGGGGEHSG GGQSHSGMLQHPAFHGGLHPHLLRRQHGSGSLSRESPFEEKLLQFMQDAF PKKSKKRKNRDPDKLFLLSLYEEIKRVPEEIRLDVKSELMQILKKYQKKS PVKAEKPAPSSTSTSSKLSSSSSGSSTVTTHLSHSMYQLQKKYEKGEREP SPQSQVERVASAGAVAVPIHTSQQLPLFQLQKKYEENSVEKVHQQQQQQQ SEQRKHVEAAQALHAAHQQPPPPPPNEHLHHPQMAHNIMFPLGQLRNEQP TAQQHQHGHNPHQQQQQHPHQQQQQGQQHHPPTIFGSTASERPPMSYENV G*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19781-PA | 482 | GF19781-PA | 1..482 | 11..501 | 1959 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22393-PA | 502 | GG22393-PA | 6..502 | 2..501 | 2527 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20476-PA | 478 | GH20476-PA | 1..478 | 11..501 | 1583 | 73.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10209-PB | 530 | CG10209-PB | 1..501 | 1..501 | 2685 | 100 | Plus |
CG10209-PA | 501 | CG10209-PA | 1..501 | 1..501 | 2685 | 100 | Plus |
CG43347-PD | 2652 | CG43347-PD | 1469..1608 | 346..482 | 165 | 37 | Plus |
CG43347-PB | 2666 | CG43347-PB | 1483..1622 | 346..482 | 165 | 37 | Plus |
CG43347-PC | 2684 | CG43347-PC | 1501..1640 | 346..482 | 165 | 37 | Plus |
sr-PE | 906 | CG7847-PE | 237..419 | 300..480 | 164 | 30.2 | Plus |
sr-PB | 906 | CG7847-PB | 237..419 | 300..480 | 164 | 30.2 | Plus |
sr-PA | 1186 | CG7847-PA | 517..699 | 300..480 | 164 | 30.2 | Plus |
sr-PD | 1271 | CG7847-PD | 517..699 | 300..480 | 164 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21018-PA | 529 | GI21018-PA | 33..529 | 1..501 | 1652 | 76.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10653-PA | 510 | GL10653-PA | 1..510 | 1..501 | 1844 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10157-PA | 513 | GA10157-PA | 1..513 | 1..501 | 1830 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20176-PA | 501 | GM20176-PA | 1..501 | 1..501 | 2618 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25653-PA | 501 | GD25653-PA | 1..501 | 1..501 | 2633 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21941-PA | 479 | GJ21941-PA | 1..479 | 11..501 | 1606 | 75.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23291-PA | 497 | GK23291-PA | 1..497 | 2..501 | 1561 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12282-PA | 500 | GE12282-PA | 1..500 | 1..501 | 2556 | 97 | Plus |
Translation from 157 to 1662
> GH20077.hyp MDRVTKPQKKMLITLLRETKYMEGKKEKEWYWEKIQAALNTIGPKKTIIQ WKKCWRDMRLTTRKKLAELKRCQLSGGSPPPGIELNQEDNDIIDIVGTEY FYEEMNGELKAENFLTGLDYAPEHLCDAILTAAVGHHQHNMQHQKDPQSH AGQQQQQDHHTNDGETNDAPGSSNGGSYQGHPVSQLQAHNGSGGGGEHSG GGQSHSGMLQHPAFHGGLHPHLLRRQHGSGSLSRESPFEEKLLQFMQDAF PKKSKKRKNRDPDKLFLLSLYEEIKRVPEEIRLDVKSELMQILKKYQKKS PVKAEKPAPSSTSTSSKLSSSSSGSSTVTTHLSHSMYQLQKKYEKGEREP SPQSQVERVASAGAVAVPIHTSQQLPLFQLQKKYEENSVEKVHQQQQQQQ SEQRKHVEAAQALHAAHQQPPPPPPNEHLHHPQMAHNIMFPLGQLRNEQP TAQQHQHGHNPHQQQQQHPHQQQQQGQQHHPPTIFGSTASERPPMSYENV G*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10209-PB | 530 | CG10209-PB | 1..501 | 1..501 | 2685 | 100 | Plus |
CG10209-PA | 501 | CG10209-PA | 1..501 | 1..501 | 2685 | 100 | Plus |
CG43347-PD | 2652 | CG43347-PD | 1469..1608 | 346..482 | 165 | 37 | Plus |
CG43347-PB | 2666 | CG43347-PB | 1483..1622 | 346..482 | 165 | 37 | Plus |
CG43347-PC | 2684 | CG43347-PC | 1501..1640 | 346..482 | 165 | 37 | Plus |