BDGP Sequence Production Resources |
Search the DGRC for GH20124
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 201 |
Well: | 24 |
Vector: | pOT2 |
Associated Gene/Transcript | soti-RA |
Protein status: | GH20124.pep: gold |
Preliminary Size: | 1149 |
Sequenced Size: | 1023 |
Gene | Date | Evidence |
---|---|---|
CG8489 | 2001-01-01 | Release 2 assignment |
CG8489 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8489 | 2003-05-21 | Blastp of sequenced clone |
CG8489 | 2008-04-29 | Release 5.5 accounting |
CG8489 | 2008-08-15 | Release 5.9 accounting |
CG8489 | 2008-12-18 | 5.12 accounting |
1023 bp (1023 high quality bases) assembled on 2003-05-21
GenBank Submission: AY060750
> GH20124.complete ACAAAACGACACAACTGATACTACAGAGAAAAAAACATCGTATTGAATAG CAGAAGCACAACCTACACTGCCGTATTTATTGTTCAATTTTTGTTGGTTG TTTTTTTTTTTTTTGTATGTGCCTGTAAGTTGGAATGGACGTACTACACG GACACGATCTGTACGATGAGCAGCTAATCGATCGAGTCGGCGACGCGGTG AATGAAGATGCTGGCGATGACTTGGACACATTGGAGGATGGACAGCAGCA GCAGCGCCTGGGAGTCAATCGTCAGATGGACATACTCCTGGACGCTCCTC AAGAGCCACCGTTGGGCGTTTTTCCGGCGCAAGGAGGGCCAAATGGACCA CCACGTCGGCGGAAGAAACGAAGTTTCTACACTATGACCAAACCCACTCC GCCATGCCAAAGTCAGGAGCCGGAGATGTGCCTCCTAATGGCCAGTGTCA CGAGGGCAATGCGTCACGTTCGCGAGGATCAGCGAGGCGAGTACTTTGCA AATTACCTCGTCGAGAATATGACCAGTCAGAACTACCCGAATGGTATGGG TCTGCCACAGCATTGGGGTCAGTTCTGATTCGCCATAGTTCTCCCATAGA TTGTAAATTAGAAGAACCTCTCTTGGACCTCGGAAGATCGAGCAAGCTCA TTGGGATCCCATACTACACATACATGTACACGTCCATATATCCAACCAGC CGATATGCATCCCATTAGTTATCTTTCCTCTAAAAACTTGCTCAAAACAA AAATACGTTACACCATAGTTATCTACCGCTCCACCAAGCTCAAAAAAGGA AAAAAAGACGTTACTTTACTGACTTACAGTTGAAAAATGTTTGCGGTTCA ATCTTGTTCAATAAACAACACGATTTAGCAAACTTATATTTTCATATTTG GTTTTCAACTTATTGTTTTCCAAATTTATTCTACAATTGTTAACAAACCA CATAATATATAAGTACCACATATATGTTAATAAAAACCGAATGATTTATC TAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
soti-RA | 1317 | soti-RA | 38..1040 | 1..1004 | 4980 | 99.9 | Plus |
soti.b | 1272 | soti.b | 38..579 | 1..543 | 2675 | 99.8 | Plus |
soti.a | 1285 | soti.a | 62..603 | 1..543 | 2675 | 99.8 | Plus |
soti.b | 1272 | soti.b | 579..995 | 588..1004 | 2085 | 100 | Plus |
soti.a | 1285 | soti.a | 603..1008 | 599..1004 | 2030 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 10205453..10206452 | 1001..1 | 4940 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 14380660..14381662 | 1004..1 | 4970 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 14121491..14122493 | 1004..1 | 4980 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 2430..2482 | 904..956 | 112 | 67.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 10205453..10206452 | 1..1001 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8489-RA | 1..444 | 135..578 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
soti-RA | 1..444 | 135..578 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
soti-RA | 1..444 | 135..578 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8489-RA | 1..444 | 135..578 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
soti-RA | 1..444 | 135..578 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8489-RA | 38..1037 | 1..1001 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
soti-RA | 38..1037 | 1..1001 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
soti-RA | 38..1037 | 1..1001 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8489-RA | 38..1037 | 1..1001 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
soti-RA | 38..1037 | 1..1001 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14380663..14381662 | 1..1001 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14380663..14381662 | 1..1001 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14380663..14381662 | 1..1001 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 10206385..10207384 | 1..1001 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14121494..14122493 | 1..1001 | 99 | Minus |
Translation from 134 to 577
> GH20124.hyp MDVLHGHDLYDEQLIDRVGDAVNEDAGDDLDTLEDGQQQQRLGVNRQMDI LLDAPQEPPLGVFPAQGGPNGPPRRRKKRSFYTMTKPTPPCQSQEPEMCL LMASVTRAMRHVREDQRGEYFANYLVENMTSQNYPNGMGLPQHWGQF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
soti-PA | 147 | CG8489-PA | 1..147 | 1..147 | 800 | 100 | Plus |
Translation from 134 to 577
> GH20124.pep MDVLHGHDLYDEQLIDRVGDAVNEDAGDDLDTLEDGQQQQRLGVNRQMDI LLDAPQEPPLGVFPAQGGPNGPPRRRKKRSFYTMTKPTPPCQSQEPEMCL LMASVTRAMRHVREDQRGEYFANYLVENMTSQNYPNGMGLPQHWGQF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17485-PA | 183 | GF17485-PA | 13..167 | 11..147 | 336 | 48.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21338-PA | 156 | GG21338-PA | 1..156 | 1..147 | 622 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13685-PA | 150 | GH13685-PA | 32..150 | 27..147 | 251 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
soti-PA | 147 | CG8489-PA | 1..147 | 1..147 | 800 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24808-PA | 152 | GI24808-PA | 42..152 | 33..147 | 252 | 47 | Plus |
Dmoj\GI21834-PA | 152 | GI21834-PA | 42..152 | 33..147 | 246 | 46.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24018-PA | 133 | GL24018-PA | 38..133 | 48..147 | 187 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21112-PA | 133 | GA21112-PA | 38..133 | 48..147 | 191 | 43 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25856-PA | 148 | GM25856-PA | 1..148 | 1..147 | 737 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20424-PA | 147 | GD20424-PA | 1..147 | 1..147 | 736 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24453-PA | 158 | GJ24453-PA | 48..158 | 33..147 | 257 | 47.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12151-PA | 145 | GK12151-PA | 47..145 | 45..147 | 255 | 50.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26454-PA | 196 | GE26454-PA | 1..147 | 1..144 | 611 | 83.2 | Plus |