BDGP Sequence Production Resources |
Search the DGRC for GH20208
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 202 |
Well: | 8 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9483-RA |
Protein status: | GH20208.pep: gold |
Preliminary Size: | 1102 |
Sequenced Size: | 939 |
Gene | Date | Evidence |
---|---|---|
CG9483 | 2001-01-01 | Release 2 assignment |
CG9483 | 2001-10-10 | Blastp of sequenced clone |
CG9483 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9483 | 2008-04-29 | Release 5.5 accounting |
CG9483 | 2008-08-15 | Release 5.9 accounting |
CG9483 | 2008-12-18 | 5.12 accounting |
939 bp (939 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060751
> GH20208.complete AAAGATTTGAATTTGTTTCGAGCAATAAAGTCAAGAAATCGATAATTGGA ATTTTATCAACTCTGGTATTTCCTAGTCCAATGCCAAGTATTCAAAAAAA CACTTTTCGGAACATCGATCAGGAGGTCTATGGCGAGCCACCGGATGAGA GCATCAGTCATGCGGCCAAGATATACGGACTTAGTGTGATCCTGGCCGCC ATCGCATTGACACAGTGGATCATTATAGGTTACACCCATATGCTGAGCCA CAGCAGATCGGAGGAGCGCTACGGCTGGTGGCTTCTGTGTACCTTTTTCG CAGTCGCCACTTTATCGTGGACCAAGCTAGGACGCAAGGTGCCCTTTAAC TACATCATTATCGCAGCGATCGTGGAAAGCTCAACTATTTATATAGCCAT GGAACAGAAGCACAATGAGAATAGACTCGTCAACTTCTACGCCGGCATTG TAGTGGTTGCCTTGATGTTGGCCTCGATATTTTGGGGCGCCTACTTTCCC ATGTTCATTGTTCCCGGTGATCTGCTGCTCAGCTGTTTGGTGGCAATAGC CAACATTATGATGATCATATTCTTTATCAATGTCCTATTTATCAACTACC AGGGAATATATTTTGCGGTTCGGAACACATTCGCCCTGGTGGCCGTCTGC ATGGTGATGTACACGGCTACCATAATCCATGATCGCCAGTTCGATGTGCC CAAGAACGAGTACTTGTTCCTCAGTGTCCTGCAGTTTTTCTCCTACATGA TCCTGCACGAACGCATCCTGGCCATATCCTTTACAAGTGCGCTCAAAACA AGTTGTTAAATGCAATTCTCTTTTGGCAGTCGTATGCAATTCGGTAAATC TTAAAATTTTGTTTGCAAGTGGTTACTAAAATAAACTGTATGAAAACTAG AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9483-RA | 921 | CG9483-RA | 21..921 | 1..901 | 4505 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 8865695..8866594 | 1..900 | 4350 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8866787..8867687 | 1..901 | 4505 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8866787..8867687 | 1..901 | 4505 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 8865695..8866594 | 1..900 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9483-RA | 1..729 | 81..809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9483-RA | 1..729 | 81..809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9483-RA | 1..729 | 81..809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9483-RA | 1..729 | 81..809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9483-RA | 1..729 | 81..809 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9483-RA | 21..920 | 1..900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9483-RA | 21..920 | 1..900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9483-RA | 21..920 | 1..900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9483-RA | 21..920 | 1..900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9483-RA | 21..920 | 1..900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8866787..8867686 | 1..900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8866787..8867686 | 1..900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8866787..8867686 | 1..900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 8866787..8867686 | 1..900 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8866787..8867686 | 1..900 | 100 | Plus |
Translation from 2 to 808
> GH20208.hyp RFEFVSSNKVKKSIIGILSTLVFPSPMPSIQKNTFRNIDQEVYGEPPDES ISHAAKIYGLSVILAAIALTQWIIIGYTHMLSHSRSEERYGWWLLCTFFA VATLSWTKLGRKVPFNYIIIAAIVESSTIYIAMEQKHNENRLVNFYAGIV VVALMLASIFWGAYFPMFIVPGDLLLSCLVAIANIMMIIFFINVLFINYQ GIYFAVRNTFALVAVCMVMYTATIIHDRQFDVPKNEYLFLSVLQFFSYMI LHERILAISFTSALKTSC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9483-PA | 242 | CG9483-PA | 1..242 | 27..268 | 1247 | 100 | Plus |
Translation from 80 to 808
> GH20208.pep MPSIQKNTFRNIDQEVYGEPPDESISHAAKIYGLSVILAAIALTQWIIIG YTHMLSHSRSEERYGWWLLCTFFAVATLSWTKLGRKVPFNYIIIAAIVES STIYIAMEQKHNENRLVNFYAGIVVVALMLASIFWGAYFPMFIVPGDLLL SCLVAIANIMMIIFFINVLFINYQGIYFAVRNTFALVAVCMVMYTATIIH DRQFDVPKNEYLFLSVLQFFSYMILHERILAISFTSALKTSC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15550-PA | 321 | GF15550-PA | 1..234 | 1..233 | 905 | 70.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25310-PA | 242 | GG25310-PA | 1..242 | 1..242 | 1193 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13868-PA | 241 | GH13868-PA | 2..235 | 10..242 | 648 | 54.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9483-PA | 242 | CG9483-PA | 1..242 | 1..242 | 1247 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17420-PA | 241 | GI17420-PA | 5..235 | 13..242 | 630 | 53.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25574-PA | 237 | GL25574-PA | 5..234 | 13..242 | 689 | 58.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21821-PA | 237 | GA21821-PA | 5..234 | 13..242 | 689 | 58.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17217-PA | 242 | GM17217-PA | 1..242 | 1..242 | 1263 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23571-PA | 242 | GD23571-PA | 1..242 | 1..242 | 1269 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18355-PA | 244 | GJ18355-PA | 7..235 | 15..242 | 673 | 57.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24534-PA | 242 | GK24534-PA | 3..230 | 10..233 | 688 | 61.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18800-PA | 242 | GE18800-PA | 1..242 | 1..242 | 1138 | 88.4 | Plus |