GH20345.complete Sequence
776 bp assembled on 2009-01-15
GenBank Submission: BT056319.1
> GH20345.complete
TCGATACCTAATCAGTGATTTTCAAAAATATTTTCCCCAAAGTGCATAAA
CAAATGTGTCAATGAAGACACCGGACACCAAAGCCAAGTTGCTGAATAAT
ATAAGTCTATCTAAACACCTGTCTTCCAAGAAAGGCGGCTCTCGCACTAG
TAACTGCGGCAATTGTCTGGAATTCTCCGTACTCACGCGTCTCTCCAGCG
TGCCCTGAATCCCCCTGTGGTCCAAGCTCACCCAAGCTCCTGTTGAAACT
TGAAAGAAATCATTGACAATGGTTCACCAAACTCGCACACCCAGCAAGGC
CATTCCCGCCAAGCACCTGAGTCCCATGCGGACCGTGGAGGGTCTGGGCG
GAAAGTACGCCGTTTCGAGCAGTCCGGCGGATAGTTTCCTGCGGAACACC
AGGCTCACGGCTCAGAGCAGCTCCCAGCAGTCGGCCGCCTTCAAATACAA
TCAGATGGTCACCCACAATCGGGAGCAGTTCAATAACCTGCACTTCTGCT
AGGAGACGGATAGGGATGTGGATGCACGTCGTCGCTGGAGAGACCGCATT
GGAGGAGGGATATACCACTACTCGTACGATGACGATTGCTTGTCACCATA
CTTAAATGCAATAAATTCAATTTGAACAAATTTCCACATATTAATTAAGT
TTCATAAATCGCAGTAGTCACGTGCTGGGGCCGGGGAAATTTATTTATTG
CAACTTTTTTATTTTGCCAAATTAAATTACCCCAACTAAGCCTGCGAGCA
AAAAAAAAAAAAAAAAAAAAAAAAAA
GH20345.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:19:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17325-RA | 778 | CG17325-RA | 30..778 | 1..749 | 3745 | 100 | Plus |
CG42305-RB | 778 | CG42305-RB | 30..778 | 1..749 | 3745 | 100 | Plus |
CG42305-RA | 656 | CG42305-RA | 30..656 | 1..627 | 3135 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:42:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 18812061..18812706 | 104..749 | 3170 | 99.4 | Plus |
chr2L | 23010047 | chr2L | 18811805..18811908 | 2..105 | 520 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:00:36 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:42:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18813296..18813942 | 104..750 | 3235 | 100 | Plus |
2L | 23513712 | 2L | 18813039..18813143 | 1..105 | 525 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:36:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18813296..18813942 | 104..750 | 3235 | 100 | Plus |
2L | 23513712 | 2L | 18813039..18813143 | 1..105 | 525 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 21:42:55 has no hits.
GH20345.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:43:46 Download gff for
GH20345.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 18811804..18811908 | 1..105 | 99 | -> | Plus |
chr2L | 18812063..18812706 | 106..749 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:59:01 Download gff for
GH20345.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17325-RB | 1..234 | 269..502 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:28:40 Download gff for
GH20345.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17325-RB | 1..234 | 269..502 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:00:37 Download gff for
GH20345.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17325-RA | 1..234 | 269..502 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:29:29 Download gff for
GH20345.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17325-RA | 1..234 | 269..502 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-01-15 12:56:42 Download gff for
GH20345.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42305-RB | 30..778 | 1..749 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:28:40 Download gff for
GH20345.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42305-RB | 30..778 | 1..749 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:00:37 Download gff for
GH20345.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42305-RB | 31..779 | 1..749 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:29:29 Download gff for
GH20345.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17325-RA | 31..779 | 1..749 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:43:46 Download gff for
GH20345.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18813039..18813143 | 1..105 | 100 | -> | Plus |
2L | 18813298..18813941 | 106..749 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:43:46 Download gff for
GH20345.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18813039..18813143 | 1..105 | 100 | -> | Plus |
2L | 18813298..18813941 | 106..749 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:43:46 Download gff for
GH20345.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18813039..18813143 | 1..105 | 100 | -> | Plus |
2L | 18813298..18813941 | 106..749 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:00:37 Download gff for
GH20345.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18813039..18813143 | 1..105 | 100 | -> | Plus |
arm_2L | 18813298..18813941 | 106..749 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:01:27 Download gff for
GH20345.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18813298..18813941 | 106..749 | 100 | | Plus |
2L | 18813039..18813143 | 1..105 | 100 | -> | Plus |
GH20345.pep Sequence
Translation from 61 to 207
> GH20345.pep
MKTPDTKAKLLNNISLSKHLSSKKGGSRTSNCGNCLEFSVLTRLSSVP*
GH20345.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:06:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42305-PC | 48 | CG42305-PC | 1..48 | 1..48 | 244 | 100 | Plus |
CG42305-PB | 48 | CG42305-PB | 1..48 | 1..48 | 244 | 100 | Plus |
CG42305-PA | 48 | CG42305-PA | 1..48 | 1..48 | 244 | 100 | Plus |
GH20345.hyp Sequence
Translation from 268 to 501
> GH20345.hyp
MVHQTRTPSKAIPAKHLSPMRTVEGLGGKYAVSSSPADSFLRNTRLTAQS
SSQQSAAFKYNQMVTHNREQFNNLHFC*
GH20345.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 10:17:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17325-PC | 77 | CG17325-PC | 1..77 | 1..77 | 399 | 100 | Plus |
CG17325-PB | 77 | CG17325-PB | 1..77 | 1..77 | 399 | 100 | Plus |
CG17325-PA | 77 | CG17325-PA | 1..77 | 1..77 | 399 | 100 | Plus |