BDGP Sequence Production Resources |
Search the DGRC for GH20409
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 204 |
Well: | 9 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3557-RA |
Protein status: | GH20409.pep: gold |
Preliminary Size: | 1069 |
Sequenced Size: | 973 |
Gene | Date | Evidence |
---|---|---|
CG3557 | 2001-01-01 | Release 2 assignment |
CG3557 | 2001-10-10 | Blastp of sequenced clone |
CG3557 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3557 | 2008-04-29 | Release 5.5 accounting |
CG3557 | 2008-08-15 | Release 5.9 accounting |
CG3557 | 2008-12-18 | 5.12 accounting |
973 bp (973 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060753
> GH20409.complete CTTTTTGGGAGAATATCATTTGGAAAAATTGGGTGTTTATTTATACCAAC ACTAGCAGACGAAACCATGAAATCCTGTTGTGCCACTCAGACGACGCGTT GTGAGTGTCCAACGGGTCTCAGATTGGGGAAGAAGCCGCAGGCTCCACTC TTCGACATGCTGGGCCCGCATCCAGATGAGGTCATCATGACGATCCTGGA CCGCATCCTCTATCTTTCGGGCGCCACGAAAATAATTCCATTGCTGGAGT TGTCGAATGAAGGATCAGCTTTTAAGAAGGAATCCTGCCCACCACCAGCA CCCTGTGCACCAAGCCCTTGCAGTTCCGGAAGCAGCTCGGCTTATCCATC TTCATCGGCCTGGAGTACATGCTGCTCCAAGCCGTCGACTATCTGTTGTT ATCCCAAGCCAACGAGATGCTGCGCCAGTCCAAAAGCTCCACTAGTGCCC TGCAGTCCAATGGATACTCCGAAATCTTCCTGCTTCAAGACCGCGAGTCG GCTTAGTTCCGCTGCCTGTTGTCCCCGCCAGCGTACTCCCAGGGTGGACT TCGATCACCCGGCGGAGGATATTCCGTTGAGAAATAAGGCGGGCAGCGCC ACGATAAGGGAACAGATAAGCCGATCAATTTCCACCTGCTCGGTGGCCTG TCAACAGCTGAAAGACAAGCTTACATCCCAGATTGCCCAAGGACACAAGG ACCAAAAGTGGTTGTGGACCCGTTTGATTCGTGGCAACGATGGGTGCATG GTGTACGAGGTGTACAAGGATTCCGATGTAGACAACTCTCCCTCTAAGAT CGGGTCGGAGGCACCCATCATCCTTTTTCTAGTCATGCCGAATGGTTGCA TCATGCCCTTTGAGTCTATTTGTGGTCCTTAGGAAGATGGTACTCGTTTT GTATACTTTTTAGCCTGTGGTCAGTTAAAAATAAACTTTCACCCGTACTT TGTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3557-RA | 1048 | CG3557-RA | 96..1048 | 1..953 | 4765 | 100 | Plus |
CG3557.a | 985 | CG3557.a | 39..985 | 1..953 | 4650 | 99.3 | Plus |
CG3557.b | 941 | CG3557.b | 285..941 | 297..953 | 3285 | 100 | Plus |
CG3557.b | 941 | CG3557.b | 25..286 | 1..262 | 1310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 2384462..2385152 | 263..953 | 99 | <- | Minus |
chr2L | 2385209..2385470 | 1..262 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3557-RA | 1..816 | 67..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3557-RA | 1..816 | 67..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3557-RA | 1..816 | 67..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3557-RA | 1..816 | 67..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3557-RA | 1..816 | 67..882 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3557-RA | 25..977 | 1..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3557-RA | 25..977 | 1..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3557-RA | 25..977 | 1..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3557-RA | 25..977 | 1..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3557-RA | 25..977 | 1..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2384761..2385451 | 263..953 | 100 | <- | Minus |
2L | 2385507..2385768 | 1..262 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2384761..2385451 | 263..953 | 100 | <- | Minus |
2L | 2385507..2385768 | 1..262 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2384761..2385451 | 263..953 | 100 | <- | Minus |
2L | 2385507..2385768 | 1..262 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 2385507..2385768 | 1..262 | 100 | Minus | |
arm_2L | 2384761..2385451 | 263..953 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2384761..2385451 | 263..953 | 100 | <- | Minus |
2L | 2385507..2385768 | 1..262 | 100 | Minus |
Translation from 0 to 881
> GH20409.hyp LFGRISFGKIGCLFIPTLADETMKSCCATQTTRCECPTGLRLGKKPQAPL FDMLGPHPDEVIMTILDRILYLSGATKIIPLLELSNEGSAFKKESCPPPA PCAPSPCSSGSSSAYPSSSAWSTCCSKPSTICCYPKPTRCCASPKAPLVP CSPMDTPKSSCFKTASRLSSAACCPRQRTPRVDFDHPAEDIPLRNKAGSA TIREQISRSISTCSVACQQLKDKLTSQIAQGHKDQKWLWTRLIRGNDGCM VYEVYKDSDVDNSPSKIGSEAPIILFLVMPNGCIMPFESICGP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3557-PA | 271 | CG3557-PA | 1..271 | 23..293 | 1479 | 100 | Plus |
CG3557-PB | 269 | CG3557-PB | 1..269 | 23..293 | 1456 | 99.3 | Plus |
CG3557-PC | 259 | CG3557-PC | 1..259 | 23..293 | 1387 | 95.6 | Plus |
Translation from 66 to 881
> GH20409.pep MKSCCATQTTRCECPTGLRLGKKPQAPLFDMLGPHPDEVIMTILDRILYL SGATKIIPLLELSNEGSAFKKESCPPPAPCAPSPCSSGSSSAYPSSSAWS TCCSKPSTICCYPKPTRCCASPKAPLVPCSPMDTPKSSCFKTASRLSSAA CCPRQRTPRVDFDHPAEDIPLRNKAGSATIREQISRSISTCSVACQQLKD KLTSQIAQGHKDQKWLWTRLIRGNDGCMVYEVYKDSDVDNSPSKIGSEAP IILFLVMPNGCIMPFESICGP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14404-PA | 258 | GF14404-PA | 13..256 | 12..268 | 582 | 47 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24524-PA | 265 | GG24524-PA | 1..265 | 1..271 | 1059 | 78.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19620-PA | 248 | GH19620-PA | 32..245 | 28..268 | 356 | 39.4 | Plus |
Dgri\GH11503-PA | 248 | GH11503-PA | 34..245 | 30..268 | 348 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3557-PA | 271 | CG3557-PA | 1..271 | 1..271 | 1479 | 100 | Plus |
CG3557-PB | 269 | CG3557-PB | 1..269 | 1..271 | 1456 | 99.3 | Plus |
CG3557-PC | 259 | CG3557-PC | 1..259 | 1..271 | 1387 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16999-PA | 262 | GI16999-PA | 27..259 | 17..268 | 342 | 39.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26470-PA | 260 | GL26470-PA | 17..257 | 18..268 | 481 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17518-PA | 260 | GA17518-PA | 17..257 | 18..268 | 481 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18232-PA | 140 | GM18232-PA | 1..140 | 132..271 | 698 | 93.6 | Plus |
Dsec\GM18231-PA | 121 | GM18231-PA | 1..65 | 1..65 | 330 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22838-PA | 266 | GD22838-PA | 1..266 | 1..271 | 1104 | 87.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24237-PA | 255 | GJ24237-PA | 2..252 | 3..268 | 447 | 42.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23740-PA | 144 | GK23740-PA | 9..107 | 2..109 | 153 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15115-PA | 270 | GE15115-PA | 1..270 | 1..271 | 1054 | 81.2 | Plus |