BDGP Sequence Production Resources |
Search the DGRC for GH20554
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 205 |
Well: | 54 |
Vector: | pOT2 |
Associated Gene/Transcript | CG10494-RB |
Protein status: | GH20554.pep: gold |
Preliminary Size: | 2088 |
Sequenced Size: | 2180 |
Gene | Date | Evidence |
---|---|---|
CG10494 | 2001-01-01 | Release 2 assignment |
CG10494 | 2001-09-19 | Blastp of sequenced clone |
CG10494 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10494 | 2008-04-29 | Release 5.5 accounting |
CG10494 | 2008-08-15 | Release 5.9 accounting |
CG10494 | 2008-12-18 | 5.12 accounting |
2180 bp (2180 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058427
> GH20554.complete TTTTGTTATTGTTATGATTTGATCAAGCTAAAAAAAAACCGATCAAATAT AAATATATATTTATTGATTTCATTGCGCGATTTAAGCATAACCATTTGAA AATGAGCAAGTTCTCGCTCTTCAATGGCAACGATGAGGACGAGCACGAAA CGGAGCAGAAATACGCACACCTTATGAGTGGATCTGGGAAATGCGAGTCA CTCGGTGTCGGAAAATAGTTCTGGGAAAGCGAGTCGCTGCAAGTGGACCA GCGCAAAGGTGGAGACCTTTCTGGAAATCATTCACCAACTTAAACTGCAA GCTGCTCTTCGAAGGCCGCGAAGCAATGCAAAGGTGTTTCGTATGGTGTC CAGAGAAATGGCCCGGCGGAACTGCCCCAAGAGTCCAAAGCATCTGAGAG TCAAGTTCCATCAGATGCGGCGTCAGTATGCGAGAGCTCGGAATGGCGGC GAACCATTCGAGCACTTTGAGGCGGTGCACGAGTTGATGCAGGGAGAAGA TGTATCTGATCTGGATGAAGAGGCGCTAGAGAGTGACAGCGATATGGAGG CCGACGAGGACCAGTCCGGCATGATCTCAGAAACCGAAGGGGACGATGCT TTGGATGCCTCAGGATCTTCAGTTAACATCGTCGCCCGCTGCAAGTGGGC AGAGGGCGAAGTGGACCTCCTCCTAGACCTGATCCACACACTTGGACTGC GAGCAGCTTTGCTGCAAAAGCGCAATGCCAAGGTCTTCAAGCTGCTGTCC AAGGAGATGGCAAAACGCAACTGCCACAAGGGTGCTGAGAAGCTGCGCAT CAAGTTCCAGCAGCTGCGGCGATTGTACAACAAGGTCAAGAACGGCACGG GGAAAACGTTCGAGCATTTTGAGGCGATGCGACTGGTCCTGGATCCCACC GAAGAGGAGGCGGCCGCAGATGCTGAAGCGGAAGCCCATCTGAGCAGCGC AAGCGATAGTGATTTCAATGACAGTGACGAGGAAGAGGGTGATGCATCAC AGAGAAGCGGAGCGCACTTTTGGACAGACGAAGAGGTTGATTCGTTTCTA CTCATCATTCGGGACAATGGTTTCTTTCGCGCCTTGGATGGCTCAAGGAA GCGCAACTTCCAGACCCTGGTGCACATTTCCAACATCCTGGCTAAGCAGG ACATCAAACGCACGCCACACCAGCTGCGCAATAAACTAAGGCTGCTCTGC AAGCGTCATCGAGAGGCCAAGGAGCACGGGCTAGATAATGTACGCATTCT GCCTCGCCACTTTGAGCTTTTCGATGAACTGATTCAGGCGCCGCGGGAGA ACAGAGAAAGTGCCATCAGCAGGCTCATTCGCATCAGCAAGCCTTCCTTT CTCAAGCCGCCAGGCAAACCAAGCGTTCCGCTGGAAAGTGACAGCGACAA CTCCAGCTCCACCTGCGATCTCCTAAGAGCGGCAGCCGATAGCGAGGACT ACGTGGACGCCATCGAGATGGAGGCTGAACCAACGCCGATTGAAGCACTC ACTGCAATCATAGAAGGTCAAAAGCAGCTGCTTGCGCAGATCAAAACTAC CAACGAAAGCTTCTTGCGGCAGCAACGCGAGCAGCAGCATCAATTTTTGG AACAAGTATCGGAACTGATGCATCGAGATCGAGAGGAGACCCTGCGCAGG ATCAGCGAAATGCTGCAACCGAAGTAATGGAAACATAGAACTCAAGCTTC TAAAACTTTTATTGAATTGAATTCGAAGTTATTGCAAAAAGTTGTCATTA TTTATATATATTATATGTATGTATTCTATATTCAATATCGTGTGTGTGTG TGTATCCTGTTTTTGTGACAGTGTCCTGTGTCTAGAATTTATTCCTCATT CATTGTGAACAGAATGTTGGTTTGAAGTTACTCGCAATTCGCAATTGTCT ACGATTTATCTAGGGTTTTGTATAAGTATATACGTAATTTTGAGAGATTT TTCGTTTTTTATTTGATATGCTACATTGTTATTTTTTGGGATTAAGTTAA CAGTTGGATTCGTTTTAGGTTTTAACATTAAGCGAAAATGCTCGTTAGTT TTTAGTTTTTGTTCTGCTTGTGTCATCTGTATACACATATGTATATATTT TGTATATTGTTCGGTTTACAACAACTAAGCAAGCTCGTCATAAAATATGT GTTGCACTCCAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17403270..17404421 | 2160..1011 | 5605 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 17404955..17405369 | 595..181 | 2060 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 17404479..17404896 | 1012..595 | 2000 | 98.6 | Minus |
chr2R | 21145070 | chr2R | 17405424..17405605 | 181..1 | 860 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21516763..21517923 | 2171..1011 | 5805 | 100 | Minus |
2R | 25286936 | 2R | 21517981..21518398 | 1012..595 | 2090 | 100 | Minus |
2R | 25286936 | 2R | 21518457..21518871 | 595..181 | 2075 | 100 | Minus |
2R | 25286936 | 2R | 21518926..21519106 | 181..1 | 905 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21517962..21519122 | 2171..1011 | 5805 | 100 | Minus |
2R | 25260384 | 2R | 21519180..21519597 | 1012..595 | 2090 | 100 | Minus |
2R | 25260384 | 2R | 21519656..21520070 | 595..181 | 2075 | 100 | Minus |
2R | 25260384 | 2R | 21520125..21520305 | 181..1 | 905 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\BuT2 | 2775 | Dbuz\BuT2 BUT2 2775bp | 1312..1377 | 2107..2043 | 129 | 70.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6773..6844 | 1519..1593 | 124 | 66.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2805..2897 | 1542..1638 | 114 | 61.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17403270..17404419 | 1013..2160 | 99 | <- | Minus |
chr2R | 17404479..17404895 | 596..1012 | 98 | <- | Minus |
chr2R | 17404955..17405368 | 182..595 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10494-RA | 1..1572 | 102..1677 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10494-RA | 1..1572 | 102..1677 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10494-RA | 1..1572 | 102..1677 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10494-RA | 1..1572 | 102..1677 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10494-RA | 1..1572 | 102..1677 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10494-RB | 1..2160 | 1..2160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10494-RB | 1..2160 | 1..2160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10494-RB | 1..2160 | 1..2160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10494-RB | 1..2160 | 1..2160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10494-RB | 1..2160 | 1..2160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21518926..21519106 | 1..181 | 100 | Minus | |
2R | 21516774..21517921 | 1013..2160 | 100 | <- | Minus |
2R | 21517981..21518397 | 596..1012 | 100 | <- | Minus |
2R | 21518457..21518870 | 182..595 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21518926..21519106 | 1..181 | 100 | Minus | |
2R | 21516774..21517921 | 1013..2160 | 100 | <- | Minus |
2R | 21517981..21518397 | 596..1012 | 100 | <- | Minus |
2R | 21518457..21518870 | 182..595 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21518926..21519106 | 1..181 | 100 | Minus | |
2R | 21516774..21517921 | 1013..2160 | 100 | <- | Minus |
2R | 21517981..21518397 | 596..1012 | 100 | <- | Minus |
2R | 21518457..21518870 | 182..595 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17404279..17405426 | 1013..2160 | 100 | <- | Minus |
arm_2R | 17405486..17405902 | 596..1012 | 100 | <- | Minus |
arm_2R | 17405962..17406375 | 182..595 | 100 | <- | Minus |
arm_2R | 17406431..17406611 | 1..181 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21517973..21519120 | 1013..2160 | 100 | <- | Minus |
2R | 21519180..21519596 | 596..1012 | 100 | <- | Minus |
2R | 21519656..21520069 | 182..595 | 100 | <- | Minus |
2R | 21520125..21520305 | 1..181 | 100 | Minus |
Translation from 342 to 1676
> GH20554.pep MVSREMARRNCPKSPKHLRVKFHQMRRQYARARNGGEPFEHFEAVHELMQ GEDVSDLDEEALESDSDMEADEDQSGMISETEGDDALDASGSSVNIVARC KWAEGEVDLLLDLIHTLGLRAALLQKRNAKVFKLLSKEMAKRNCHKGAEK LRIKFQQLRRLYNKVKNGTGKTFEHFEAMRLVLDPTEEEAAADAEAEAHL SSASDSDFNDSDEEEGDASQRSGAHFWTDEEVDSFLLIIRDNGFFRALDG SRKRNFQTLVHISNILAKQDIKRTPHQLRNKLRLLCKRHREAKEHGLDNV RILPRHFELFDELIQAPRENRESAISRLIRISKPSFLKPPGKPSVPLESD SDNSSSTCDLLRAAADSEDYVDAIEMEAEPTPIEALTAIIEGQKQLLAQI KTTNESFLRQQREQQHQFLEQVSELMHRDREETLRRISEMLQPK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12092-PA | 523 | GF12092-PA | 82..523 | 1..444 | 1584 | 71.7 | Plus |
Dana\GF12092-PA | 523 | GF12092-PA | 40..246 | 92..293 | 292 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20773-PA | 523 | GG20773-PA | 80..523 | 1..444 | 2124 | 93 | Plus |
Dere\GG20773-PA | 523 | GG20773-PA | 34..232 | 89..284 | 282 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20053-PA | 620 | GH20053-PA | 175..620 | 1..444 | 1131 | 53.5 | Plus |
Dgri\GH20053-PA | 620 | GH20053-PA | 41..368 | 2..324 | 381 | 35.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10494-PA | 523 | CG10494-PA | 80..523 | 1..444 | 2265 | 100 | Plus |
CG10494-PB | 444 | CG10494-PB | 1..444 | 1..444 | 2265 | 100 | Plus |
CG10494-PA | 523 | CG10494-PA | 28..271 | 83..324 | 298 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20463-PA | 628 | GI20463-PA | 187..628 | 1..444 | 1032 | 51.4 | Plus |
Dmoj\GI20463-PA | 628 | GI20463-PA | 38..355 | 2..296 | 388 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17489-PA | 500 | GL17489-PA | 71..497 | 1..444 | 1179 | 59.5 | Plus |
Dper\GL17489-PA | 500 | GL17489-PA | 38..227 | 101..296 | 235 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24178-PA | 503 | GA24178-PA | 71..500 | 1..444 | 1193 | 59.9 | Plus |
Dpse\GA24178-PA | 503 | GA24178-PA | 38..230 | 101..296 | 237 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15717-PA | 523 | GM15717-PA | 80..523 | 1..444 | 2303 | 97.3 | Plus |
Dsec\GM15717-PA | 523 | GM15717-PA | 28..245 | 83..293 | 273 | 34.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25195-PA | 523 | GD25195-PA | 80..523 | 1..444 | 2317 | 98 | Plus |
Dsim\GD25195-PA | 523 | GD25195-PA | 28..245 | 83..293 | 280 | 34.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22312-PA | 627 | GJ22312-PA | 186..627 | 1..444 | 1057 | 53.1 | Plus |
Dvir\GJ22312-PA | 627 | GJ22312-PA | 59..374 | 18..320 | 364 | 33.1 | Plus |
Translation from 342 to 1676
> GH20554.hyp MVSREMARRNCPKSPKHLRVKFHQMRRQYARARNGGEPFEHFEAVHELMQ GEDVSDLDEEALESDSDMEADEDQSGMISETEGDDALDASGSSVNIVARC KWAEGEVDLLLDLIHTLGLRAALLQKRNAKVFKLLSKEMAKRNCHKGAEK LRIKFQQLRRLYNKVKNGTGKTFEHFEAMRLVLDPTEEEAAADAEAEAHL SSASDSDFNDSDEEEGDASQRSGAHFWTDEEVDSFLLIIRDNGFFRALDG SRKRNFQTLVHISNILAKQDIKRTPHQLRNKLRLLCKRHREAKEHGLDNV RILPRHFELFDELIQAPRENRESAISRLIRISKPSFLKPPGKPSVPLESD SDNSSSTCDLLRAAADSEDYVDAIEMEAEPTPIEALTAIIEGQKQLLAQI KTTNESFLRQQREQQHQFLEQVSELMHRDREETLRRISEMLQPK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10494-PA | 523 | CG10494-PA | 80..523 | 1..444 | 2265 | 100 | Plus |
CG10494-PB | 444 | CG10494-PB | 1..444 | 1..444 | 2265 | 100 | Plus |
CG10494-PA | 523 | CG10494-PA | 28..271 | 83..324 | 298 | 34.8 | Plus |