BDGP Sequence Production Resources |
Search the DGRC for GH20802
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 208 |
Well: | 2 |
Vector: | pOT2 |
Associated Gene/Transcript | CG2233-RA |
Protein status: | GH20802.pep: gold |
Preliminary Size: | 1529 |
Sequenced Size: | 1484 |
Gene | Date | Evidence |
---|---|---|
CG2233 | 2001-01-01 | Release 2 assignment |
CG2233 | 2001-09-19 | Blastp of sequenced clone |
CG2233 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2233 | 2008-04-29 | Release 5.5 accounting |
CG2233 | 2008-08-15 | Release 5.9 accounting |
CG2233 | 2008-12-18 | 5.12 accounting |
1484 bp (1484 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058429
> GH20802.complete TTTGAATTCGTCGCGATGTTTTCGATTAACGCCGTGATCCTGGGCATTTT GGTTACTTCCGTTATGGCCCAGGATGCAAGGGGAACGTGTGAACTGAGCA TCGGTTCTCCGGCTCCGGTTGTTATTAGCAATTTTGGCTCCCAGCGTTTA TTGTTCGATTCCGTGCGAAAATTAGAACGGGAAAATTACCAGACCATTGA CCTTTTCTGCGCGAGCGGATTTTCCATAGACTATTACAACTATTACAACA ACCAGATCTCGACTACAATCAAAGCGACTAAACTTACAATGACCTGCGAC CCTATTCATCGGTTTACCTATAAAGATGGCATAAAAGATGTAATTAGTGT TCGGTGTCTGGAGGTCGGCCCTCAGTTGTTTGAGAGCATGAACAAATTGC CAAATTGCACGGGCATGACTCTAGTTGTCGGAAGAAAATTCGATGGCATT GGTTTAATAAAATATTCAGCATTGTGCTATGATTTGGCCGCATTTCAATT GAAATATATTGGTTATACCACAAATTTCAATAATATCCAGATTTTCCCAG AGACCCAATTGGGACAACTTAACGATATCGGACTTGATACTCCTATCAGT TACCAAAAAAATCTATTCGAGACCATCAGCAAGAGTGAACTTGATGCGTA CTTGGCAAAGGAGAAGCAGTTGTTCACGGAGGACACTTTTCAGGTTGGCA GTTTGGTCCAGGATGAGATGGTTAGTAGACACTTGGTTGTCTACGAGGAC TTGCTGACCACCGTCTGGTTGGAGGTTCTGCGTTCCGGCAACTGGAAGCA TTGGACGAAGGCAATGCGTGATGCCATCGGTGTCCACTTCGACATTCGTT TGGGTGTTTCCGGAACCGTGAAGCTGCCGACGTTCGCCGGGCAATCATGC AACGGAAGCCGATCGCTCAACATTGAACTGATTGGTGGCAAATTCCTGCC CATTCCCGCCCACATTTGGGCCCATGTTCACGCTGTGGAAAAGTCCGGTA CCGGACAGGATGAGTTCGTCATCATTGGACACAACTCGCCCTTCTATCGC AGTGACTTAAGCAATCTGTGCCCCTCGATGTGCAACCAAGTGTCCTGGCT GAGGAACACCCTCTTCTCCAGACTCCACGAGTTTCCCGCCTTTGGAATGG TGCAGTGCTGCCGTGTGGAGGATGTGGCCCACAAACTGGACAATTTTCCC GGTCCCTTTGAGAATGAAAATATGAATGTCAGCAGGACAACCGAGGCTAC CACAATATAAACAGTTCCCTTTATATTATCCCTCTGTTCCAACAAATATG GGACTCTTTGTGTACATGCAATTTGTATAAAGCGCCTTTTAATGCATTAA AATGCATTTAATGCAATAATACTTGTCTATATAATCAGCCCGTATTGCTT TGTATCCGTATACGATCCTTAATTCCAGTAATAAAGTCACAATTTGCGCA TATTTGAATCTTTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2233.f | 3780 | CG2233.f | 14..1479 | 1..1466 | 7330 | 100 | Plus |
CG2233-RA | 1644 | CG2233-RA | 107..1572 | 1..1466 | 7330 | 100 | Plus |
CG2233.e | 1565 | CG2233.e | 302..1528 | 240..1466 | 6135 | 100 | Plus |
CG2233.e | 1565 | CG2233.e | 14..252 | 1..239 | 1195 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 7927588..7928006 | 1463..1045 | 2095 | 100 | Minus |
chrX | 22417052 | chrX | 7928067..7928484 | 1044..627 | 2060 | 99.5 | Minus |
chrX | 22417052 | chrX | 7928748..7929060 | 552..240 | 1565 | 100 | Minus |
chrX | 22417052 | chrX | 7929110..7929348 | 239..1 | 1195 | 100 | Minus |
chrX | 22417052 | chrX | 7928573..7928651 | 629..551 | 395 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 8035738..8036159 | 1466..1045 | 2110 | 100 | Minus |
X | 23542271 | X | 8036220..8036637 | 1044..627 | 2090 | 100 | Minus |
X | 23542271 | X | 8036900..8037212 | 552..240 | 1565 | 100 | Minus |
X | 23542271 | X | 8037262..8037500 | 239..1 | 1195 | 100 | Minus |
X | 23542271 | X | 8036726..8036804 | 629..551 | 395 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 8043836..8044257 | 1466..1045 | 2110 | 100 | Minus |
X | 23527363 | X | 8044318..8044735 | 1044..627 | 2090 | 100 | Minus |
X | 23527363 | X | 8044998..8045310 | 552..240 | 1565 | 100 | Minus |
X | 23527363 | X | 8045360..8045598 | 239..1 | 1195 | 100 | Minus |
X | 23527363 | X | 8044824..8044902 | 629..551 | 395 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
invader2 | 5124 | invader2 INVADER2 5124bp | 4341..4491 | 1407..1256 | 127 | 55.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 7927588..7928006 | 1045..1463 | 100 | <- | Minus |
chrX | 7928067..7928481 | 630..1044 | 99 | <- | Minus |
chrX | 7928573..7928649 | 553..629 | 100 | <- | Minus |
chrX | 7928748..7929060 | 240..552 | 100 | <- | Minus |
chrX | 7929110..7929348 | 1..239 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2233-RA | 1..1245 | 16..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2233-RA | 1..1245 | 16..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2233-RA | 1..1245 | 16..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2233-RA | 1..1245 | 16..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2233-RA | 1..1245 | 16..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2233-RA | 1..1463 | 1..1463 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2233-RA | 1..1463 | 1..1463 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2233-RA | 18..1480 | 1..1463 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2233-RA | 1..1463 | 1..1463 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2233-RA | 18..1480 | 1..1463 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8035741..8036159 | 1045..1463 | 100 | <- | Minus |
X | 8036220..8036634 | 630..1044 | 100 | <- | Minus |
X | 8036726..8036802 | 553..629 | 100 | <- | Minus |
X | 8036900..8037212 | 240..552 | 100 | <- | Minus |
X | 8037262..8037500 | 1..239 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8035741..8036159 | 1045..1463 | 100 | <- | Minus |
X | 8036220..8036634 | 630..1044 | 100 | <- | Minus |
X | 8036726..8036802 | 553..629 | 100 | <- | Minus |
X | 8036900..8037212 | 240..552 | 100 | <- | Minus |
X | 8037262..8037500 | 1..239 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8035741..8036159 | 1045..1463 | 100 | <- | Minus |
X | 8036220..8036634 | 630..1044 | 100 | <- | Minus |
X | 8036726..8036802 | 553..629 | 100 | <- | Minus |
X | 8036900..8037212 | 240..552 | 100 | <- | Minus |
X | 8037262..8037500 | 1..239 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 7929774..7930192 | 1045..1463 | 100 | <- | Minus |
arm_X | 7930253..7930667 | 630..1044 | 100 | <- | Minus |
arm_X | 7930759..7930835 | 553..629 | 100 | <- | Minus |
arm_X | 7930933..7931245 | 240..552 | 100 | <- | Minus |
arm_X | 7931295..7931533 | 1..239 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8043839..8044257 | 1045..1463 | 100 | <- | Minus |
X | 8044318..8044732 | 630..1044 | 100 | <- | Minus |
X | 8044824..8044900 | 553..629 | 100 | <- | Minus |
X | 8044998..8045310 | 240..552 | 100 | <- | Minus |
X | 8045360..8045598 | 1..239 | 100 | Minus |
Translation from 0 to 1259
> GH20802.hyp FEFVAMFSINAVILGILVTSVMAQDARGTCELSIGSPAPVVISNFGSQRL LFDSVRKLERENYQTIDLFCASGFSIDYYNYYNNQISTTIKATKLTMTCD PIHRFTYKDGIKDVISVRCLEVGPQLFESMNKLPNCTGMTLVVGRKFDGI GLIKYSALCYDLAAFQLKYIGYTTNFNNIQIFPETQLGQLNDIGLDTPIS YQKNLFETISKSELDAYLAKEKQLFTEDTFQVGSLVQDEMVSRHLVVYED LLTTVWLEVLRSGNWKHWTKAMRDAIGVHFDIRLGVSGTVKLPTFAGQSC NGSRSLNIELIGGKFLPIPAHIWAHVHAVEKSGTGQDEFVIIGHNSPFYR SDLSNLCPSMCNQVSWLRNTLFSRLHEFPAFGMVQCCRVEDVAHKLDNFP GPFENENMNVSRTTEATTI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2233-PA | 414 | CG2233-PA | 1..414 | 6..419 | 2180 | 100 | Plus |
Translation from 15 to 1259
> GH20802.pep MFSINAVILGILVTSVMAQDARGTCELSIGSPAPVVISNFGSQRLLFDSV RKLERENYQTIDLFCASGFSIDYYNYYNNQISTTIKATKLTMTCDPIHRF TYKDGIKDVISVRCLEVGPQLFESMNKLPNCTGMTLVVGRKFDGIGLIKY SALCYDLAAFQLKYIGYTTNFNNIQIFPETQLGQLNDIGLDTPISYQKNL FETISKSELDAYLAKEKQLFTEDTFQVGSLVQDEMVSRHLVVYEDLLTTV WLEVLRSGNWKHWTKAMRDAIGVHFDIRLGVSGTVKLPTFAGQSCNGSRS LNIELIGGKFLPIPAHIWAHVHAVEKSGTGQDEFVIIGHNSPFYRSDLSN LCPSMCNQVSWLRNTLFSRLHEFPAFGMVQCCRVEDVAHKLDNFPGPFEN ENMNVSRTTEATTI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20989-PA | 907 | GF20989-PA | 535..879 | 66..404 | 789 | 47 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17590-PA | 430 | GG17590-PA | 1..409 | 1..412 | 1354 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17970-PA | 436 | GH17970-PA | 5..403 | 4..395 | 789 | 39.5 | Plus |
Dgri\GH24487-PA | 426 | GH24487-PA | 23..402 | 25..395 | 519 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2233-PA | 414 | CG2233-PA | 1..414 | 1..414 | 2180 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15361-PA | 427 | GI15361-PA | 1..394 | 1..395 | 779 | 39.2 | Plus |
Dmoj\GI21626-PA | 401 | GI21626-PA | 1..401 | 1..406 | 692 | 36.6 | Plus |
Dmoj\GI10894-PA | 435 | GI10894-PA | 14..411 | 18..394 | 594 | 33.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15238-PA | 367 | GL15238-PA | 1..367 | 1..413 | 751 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15315-PA | 416 | GA15315-PA | 1..416 | 1..413 | 927 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11220-PA | 260 | GM11220-PA | 40..242 | 205..407 | 994 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16135-PA | 421 | GD16135-PA | 1..401 | 1..407 | 1668 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16564-PA | 431 | GJ16564-PA | 1..402 | 1..399 | 872 | 43.5 | Plus |
Dvir\GJ16569-PA | 426 | GJ16569-PA | 15..405 | 21..394 | 568 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16141-PA | 401 | GK16141-PA | 7..387 | 11..395 | 696 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17490-PA | 430 | GE17490-PA | 1..400 | 1..398 | 1331 | 64.8 | Plus |