BDGP Sequence Production Resources |
Search the DGRC for GH20817
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 208 |
Well: | 17 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1648-RA |
Protein status: | GH20817.pep: gold |
Preliminary Size: | 1135 |
Sequenced Size: | 973 |
Gene | Date | Evidence |
---|---|---|
CG1648 | 2001-01-01 | Release 2 assignment |
CG1648 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1648 | 2003-01-16 | Blastp of sequenced clone |
CG1648 | 2008-04-29 | Release 5.5 accounting |
CG1648 | 2008-08-15 | Release 5.9 accounting |
CG1648 | 2008-12-18 | 5.12 accounting |
973 bp (973 high quality bases) assembled on 2003-01-16
GenBank Submission: AY060755
> GH20817.complete CAGTCGGACGTTTAAAAATAAACGCGCTCCACCAAAAATACCTAGCCCGC TGGCCGCAAACGCAAATAAATCTGAACAAAAATTCGAATTCCATCCGGAT CAAACAAACTTACAAACCCGAAAATTAGTTCTTCGACTCCAACGGCCGAG AAAACCGCAACAGTTTCAAAATGTTCAGCTCGATTTCAGCTTCCTTGAAG AACTTCGGTGACAAGACCGCCAACCTCTTCAGCAAGAAGAAGGATGAGGC CGAGAAGCTGGCCAACGAGAAGGCTGCCGAGGCCCAGAAGCTAGCCGAGG AGCAGGCCAAGAAGGTGGGCCAGTCCGTACAGCAGACCAAGGGCGAGGCC GAGCAGTTGGCCGCCAGCACGGCCAAGGAAGCCGCTGCTCTGGCCACCGC GGAGGCTCAGAAGGCTGGACAGGCGATTGACCAGGGTGTGAACCGTGCCG CCGGAGCCGTCAACCAAGGCAAGCAGGCGGTGGACAACACGGTGGCCCAG GCGGCGGCCGTGGCCCAGAACTCCAAGCAGGTGGCGGCCAATGTGGCGGA GGCCTCCCAGCGAGCGGCCGCCAATGCGGTGGACCAGACCAAGAAGGCGG CCAACGACGCCATCAACAAGAGCGTGAAGGCCGCCGAGAACGTGGCGGAC CAGAAGCTGAAGCAGGCGGAGGGCGCCATCGATGGGGCACTGAAGCAGAC CAGTCAAACGGTGGACCAGAAGCTGCAGGAGGCCAACCAGTATGTCGACC AGAAGCGCCAGTCCGTCGAGAAGACCGTCCAGGATGCGGCCGGACAGGCC CAGGAGTCTGCCGGACAGCAGGCCAACGCCCTGTTGGGCAAGCTGCATCT GGGTCAGAAGTAGAGGCGTCTCCCTTCGCGGTGCCACCTAAAATATCTTG ATGTGAAAATGCTTTAGATACAAAAACAAAAAAAATAGAAAGGAATTTGC TTCAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1648.c | 1488 | CG1648.c | 122..1076 | 1..955 | 4775 | 100 | Plus |
CG1648-RA | 1227 | CG1648-RA | 122..1076 | 1..955 | 4775 | 100 | Plus |
CG1648.a | 991 | CG1648.a | 225..990 | 190..955 | 3830 | 100 | Plus |
CG1648.a | 991 | CG1648.a | 24..212 | 1..189 | 945 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5698862..5699443 | 953..372 | 2880 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 5699948..5700133 | 372..187 | 930 | 100 | Minus |
chr2R | 21145070 | chr2R | 5707325..5707513 | 189..1 | 930 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 2933..2997 | 633..697 | 109 | 63.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5698862..5699442 | 373..953 | 99 | <- | Minus |
chr2R | 5699948..5700130 | 190..372 | 100 | <- | Minus |
chr2R | 5707325..5707513 | 1..189 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1648-RA | 1..693 | 171..863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1648-RA | 1..693 | 171..863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1648-RA | 1..693 | 171..863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1648-RA | 1..693 | 171..863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1648-RA | 1..693 | 171..863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1648-RA | 24..976 | 1..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1648-RA | 24..976 | 1..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1648-RA | 26..978 | 1..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1648-RA | 24..976 | 1..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1648-RA | 26..978 | 1..953 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9811388..9811968 | 373..953 | 100 | <- | Minus |
2R | 9812482..9812664 | 190..372 | 100 | <- | Minus |
2R | 9819840..9820028 | 1..189 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9811388..9811968 | 373..953 | 100 | <- | Minus |
2R | 9812482..9812664 | 190..372 | 100 | <- | Minus |
2R | 9819840..9820028 | 1..189 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9811388..9811968 | 373..953 | 100 | <- | Minus |
2R | 9812482..9812664 | 190..372 | 100 | <- | Minus |
2R | 9819840..9820028 | 1..189 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5698893..5699473 | 373..953 | 100 | <- | Minus |
arm_2R | 5699987..5700169 | 190..372 | 100 | <- | Minus |
arm_2R | 5707345..5707533 | 1..189 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9812587..9813167 | 373..953 | 100 | <- | Minus |
2R | 9813681..9813863 | 190..372 | 100 | <- | Minus |
2R | 9821039..9821227 | 1..189 | 100 | Minus |
Translation from 170 to 862
> GH20817.pep MFSSISASLKNFGDKTANLFSKKKDEAEKLANEKAAEAQKLAEEQAKKVG QSVQQTKGEAEQLAASTAKEAAALATAEAQKAGQAIDQGVNRAAGAVNQG KQAVDNTVAQAAAVAQNSKQVAANVAEASQRAAANAVDQTKKAANDAINK SVKAAENVADQKLKQAEGAIDGALKQTSQTVDQKLQEANQYVDQKRQSVE KTVQDAAGQAQESAGQQANALLGKLHLGQK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11480-PA | 232 | GF11480-PA | 1..232 | 1..230 | 943 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25263-PA | 230 | GG25263-PA | 1..230 | 1..230 | 1078 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22847-PA | 233 | GH22847-PA | 1..233 | 1..230 | 829 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1648-PC | 230 | CG1648-PC | 1..230 | 1..230 | 1096 | 100 | Plus |
CG1648-PA | 230 | CG1648-PA | 1..230 | 1..230 | 1096 | 100 | Plus |
CG1648-PB | 232 | CG1648-PB | 10..232 | 8..230 | 1065 | 100 | Plus |
CG45076-PH | 619 | CG45076-PH | 331..545 | 23..218 | 154 | 26 | Plus |
CG45076-PA | 619 | CG45076-PA | 331..545 | 23..218 | 154 | 26 | Plus |
CG45076-PH | 619 | CG45076-PH | 356..562 | 19..221 | 151 | 28.8 | Plus |
CG45076-PA | 619 | CG45076-PA | 356..562 | 19..221 | 151 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21225-PA | 233 | GI21225-PA | 1..233 | 1..230 | 863 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17447-PA | 232 | GL17447-PA | 1..232 | 1..230 | 851 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14072-PB | 230 | GA14072-PB | 1..230 | 1..230 | 883 | 87.8 | Plus |
Dpse\GA14072-PA | 232 | GA14072-PA | 1..232 | 1..230 | 851 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20580-PA | 230 | GM20580-PA | 1..230 | 1..230 | 1096 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10052-PA | 230 | GD10052-PA | 1..230 | 1..230 | 1096 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20829-PA | 233 | GJ20829-PA | 11..233 | 8..230 | 818 | 84.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15615-PA | 230 | GK15615-PA | 1..229 | 1..227 | 834 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22072-PA | 230 | GE22072-PA | 1..230 | 1..230 | 1090 | 99.6 | Plus |
Translation from 170 to 862
> GH20817.hyp MFSSISASLKNFGDKTANLFSKKKDEAEKLANEKAAEAQKLAEEQAKKVG QSVQQTKGEAEQLAASTAKEAAALATAEAQKAGQAIDQGVNRAAGAVNQG KQAVDNTVAQAAAVAQNSKQVAANVAEASQRAAANAVDQTKKAANDAINK SVKAAENVADQKLKQAEGAIDGALKQTSQTVDQKLQEANQYVDQKRQSVE KTVQDAAGQAQESAGQQANALLGKLHLGQK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1648-PC | 230 | CG1648-PC | 1..230 | 1..230 | 1096 | 100 | Plus |
CG1648-PA | 230 | CG1648-PA | 1..230 | 1..230 | 1096 | 100 | Plus |
CG1648-PB | 232 | CG1648-PB | 10..232 | 8..230 | 1065 | 100 | Plus |
CG45076-PH | 619 | CG45076-PH | 331..545 | 23..218 | 154 | 26 | Plus |
CG45076-PA | 619 | CG45076-PA | 331..545 | 23..218 | 154 | 26 | Plus |
CG45076-PH | 619 | CG45076-PH | 356..562 | 19..221 | 151 | 28.8 | Plus |