BDGP Sequence Production Resources |
Search the DGRC for GH20858
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 208 |
Well: | 58 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9099-RA |
Protein status: | GH20858.pep: gold |
Preliminary Size: | 904 |
Sequenced Size: | 732 |
Gene | Date | Evidence |
---|---|---|
CG9099 | 2001-01-01 | Release 2 assignment |
CG9099 | 2001-10-10 | Blastp of sequenced clone |
CG9099 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9099 | 2008-04-29 | Release 5.5 accounting |
CG9099 | 2008-08-15 | Release 5.9 accounting |
CG9099 | 2008-12-18 | 5.12 accounting |
732 bp (732 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060757
> GH20858.complete TCTTAAAACTGTCATTATTTTAATATTTCAATAACCCGGAGCAAATCCCA GGCAGTTAATCCGATCCGCAATGACGAACGAAGATGTGGGCACCAACAGC GTCGCCGACCGCCTACAGTTGGGTCCGCGCGAAGGCGTCACCTATCCGAT CCAGATGAAGTACTGTGGCCACTGCACGATGCCCATTGAGTACTGCGAGT ACTATCCGGAGTACGAGAAGTGCAAGGAGTGGCTGGAGCTCCACATGCCC GATGACTTCGAGCGACTAAAGATTGAGGAGGAGGCTGCCGCCGCTGACGG GACGGATGACGACAAGAAGCGCCAGAAACGCGGTGGCAAGGGACTGTTGC GCGTCAAGAAGAAAGAGGACGTGCCCAAGCGTATCTGCGTCTCGCGGGCG GCACGTGGCAAAAAGAAGTCAGTGACCGTGGTCACAGGATTGAGCACTTT TGATATTGATCTCAAGGTGGCCGCCAAGTTCTTTGGCACGAAATTTGCCT GCGGCTCCTCGGTTACCGGAGACGACGAGATCGTCATTCAGGGTGACGTC AAGGATGACTTGTTCGATGTCATACCCGAAAAATGGGCCGAGATCGATGA GGACGTCATCGAGGATTTGGGCGATCAGAAGCGAACATAAATAATTTACC TTTTTTTTTAGCTTATTTTATACGCTCCATCAACATAAATATATGAAACG TTAAACGTAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 16775594..16775857 | 452..189 | 1320 | 100 | Minus |
chrX | 22417052 | chrX | 16775173..16775429 | 708..452 | 1285 | 100 | Minus |
chrX | 22417052 | chrX | 16775945..16776134 | 190..1 | 935 | 99.5 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16775173..16775428 | 453..708 | 100 | <- | Minus |
chrX | 16775594..16775855 | 191..452 | 100 | <- | Minus |
chrX | 16775945..16776134 | 1..190 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9099-RA | 1..570 | 71..640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9099-RA | 1..570 | 71..640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9099-RA | 1..570 | 71..640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9099-RA | 1..570 | 71..640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9099-RA | 1..570 | 71..640 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9099-RA | 19..724 | 1..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9099-RA | 19..724 | 1..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9099-RA | 22..729 | 1..708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9099-RA | 19..724 | 1..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9099-RA | 22..729 | 1..708 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16885967..16886228 | 191..452 | 100 | <- | Minus |
X | 16886318..16886507 | 1..190 | 100 | Minus | |
X | 16885546..16885801 | 453..708 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16885967..16886228 | 191..452 | 100 | <- | Minus |
X | 16886318..16886507 | 1..190 | 100 | Minus | |
X | 16885546..16885801 | 453..708 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16885967..16886228 | 191..452 | 100 | <- | Minus |
X | 16886318..16886507 | 1..190 | 100 | Minus | |
X | 16885546..16885801 | 453..708 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16779579..16779834 | 453..708 | 100 | <- | Minus |
arm_X | 16780000..16780261 | 191..452 | 100 | <- | Minus |
arm_X | 16780351..16780540 | 1..190 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16893644..16893899 | 453..708 | 100 | <- | Minus |
X | 16894065..16894326 | 191..452 | 100 | <- | Minus |
X | 16894416..16894605 | 1..190 | 100 | Minus |
Translation from 70 to 639
> GH20858.pep MTNEDVGTNSVADRLQLGPREGVTYPIQMKYCGHCTMPIEYCEYYPEYEK CKEWLELHMPDDFERLKIEEEAAAADGTDDDKKRQKRGGKGLLRVKKKED VPKRICVSRAARGKKKSVTVVTGLSTFDIDLKVAAKFFGTKFACGSSVTG DDEIVIQGDVKDDLFDVIPEKWAEIDEDVIEDLGDQKRT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21753-PA | 132 | GF21753-PA | 1..127 | 1..127 | 559 | 91.3 | Plus |
Dana\GF19734-PA | 56 | GF19734-PA | 4..56 | 136..188 | 241 | 88.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18216-PA | 189 | GG18216-PA | 1..189 | 1..189 | 976 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12791-PA | 185 | GH12791-PA | 1..185 | 1..188 | 806 | 89.9 | Plus |
Dgri\GH18123-PA | 188 | GH18123-PA | 14..184 | 25..189 | 555 | 60.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
DENR-PB | 189 | CG9099-PB | 1..189 | 1..189 | 1004 | 100 | Plus |
DENR-PA | 189 | CG9099-PA | 1..189 | 1..189 | 1004 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15232-PA | 185 | GI15232-PA | 1..185 | 1..188 | 890 | 91.5 | Plus |
Dmoj\GI23839-PA | 195 | GI23839-PA | 23..195 | 23..188 | 547 | 62.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22388-PA | 189 | GL22388-PA | 1..189 | 1..188 | 820 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21541-PA | 189 | GA21541-PA | 1..189 | 1..188 | 820 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13357-PA | 189 | GM13357-PA | 1..189 | 1..189 | 982 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15715-PA | 189 | GD15715-PA | 1..189 | 1..189 | 982 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18691-PA | 185 | GJ18691-PA | 1..185 | 1..188 | 890 | 91 | Plus |
Dvir\GJ23296-PA | 196 | GJ23296-PA | 23..192 | 23..188 | 581 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14620-PA | 187 | GK14620-PA | 1..187 | 1..188 | 905 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15635-PA | 189 | GE15635-PA | 1..189 | 1..189 | 976 | 98.4 | Plus |
Translation from 70 to 639
> GH20858.hyp MTNEDVGTNSVADRLQLGPREGVTYPIQMKYCGHCTMPIEYCEYYPEYEK CKEWLELHMPDDFERLKIEEEAAAADGTDDDKKRQKRGGKGLLRVKKKED VPKRICVSRAARGKKKSVTVVTGLSTFDIDLKVAAKFFGTKFACGSSVTG DDEIVIQGDVKDDLFDVIPEKWAEIDEDVIEDLGDQKRT*