BDGP Sequence Production Resources |
Search the DGRC for GH20904
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 209 |
Well: | 4 |
Vector: | pOT2 |
Associated Gene/Transcript | Cpr50Cb-RA |
Protein status: | GH20904.pep: gold |
Preliminary Size: | 1036 |
Sequenced Size: | 859 |
Gene | Date | Evidence |
---|---|---|
CG6305 | 2001-01-01 | Release 2 assignment |
CG6305 | 2001-10-10 | Blastp of sequenced clone |
CG6305 | 2003-01-01 | Sim4 clustering to Release 3 |
Cpr50Cb | 2008-04-29 | Release 5.5 accounting |
Cpr50Cb | 2008-08-15 | Release 5.9 accounting |
Cpr50Cb | 2008-12-18 | 5.12 accounting |
859 bp (859 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060758
> GH20904.complete CTTCGTGCGGTTGTCTAGGAAATCAATCTAGCCGAACCTAAAAAGATAAA ACCACCTCCTCTTTAACTGAGGCCCCCTCCTAGTTGAGAAATCCAACCGG TGATAAAAAAATAAAACCCTCCCCCGCCCGGTGAAACCAGCGGCGTTTGT GGATACACTACTTTTTGCCATCGTCTGTGAACGTAAAATCGAAACTCAAC TAACAAAATGATGTCCTTCAAGTCGTTCGTCCTGCTTAGCTTATCCCTCG CTGCCATCAGTGCCTATGCCTACGCCCAGATCGCCCCTGGCTCCAACGCG TACCTCCCGCCCACCAAGAATGGCTACGACTACTCGGAACCCAAGACCCC ATTCAAGCCCGGCCCACCTGGAAGACCAGCGGCACCTGGACCCCGGCCAC CCGCACCTCCTGGCACTCCCCGCAACATACCTGGCCAGCCAGGCGATGAC CATGTCCACGTGCCCGGCATGCCGTACGACTTCGAGTACGCCGTTCAGGA TCCGGAGACCGCCAACGATTATGCGCACAAGGCGTCCAGTGATGGTGACG TGGTGACCGGCGAGTACCGCGTCCAGATGCCCGACGGAAGGACCCAGATC GTCCGCTACACCGCCGACTGGAAGACGGGCTACCACGCGGACGTGAGCTA CGAGGGCGAGGCCACGTACCCGCAGGGACCACAGCCAGGAGCTCGTGGCG GCGGCGGCGGTGGTGCTGGTGGTGCCGGCGGGTACAAGTACTAGGCGTGG GTGGTGCTTCGACTGGGTCAGCTGGGGTCACATATGTATCTTGCGAAACG TGTAAGCCTTACGATATACCAATAAAAAGTATTGATAAACTAAAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cpr50Cb-RA | 1098 | Cpr50Cb-RA | 22..865 | 1..844 | 4220 | 100 | Plus |
Cpr50Cb.d | 1264 | Cpr50Cb.d | 324..1031 | 137..844 | 3540 | 100 | Plus |
Cpr50Cb.b | 1033 | Cpr50Cb.b | 324..1031 | 137..844 | 3540 | 100 | Plus |
Cpr50Cb.d | 1264 | Cpr50Cb.d | 22..157 | 1..136 | 680 | 100 | Plus |
Cpr50Cb.b | 1033 | Cpr50Cb.b | 22..157 | 1..136 | 680 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 9692179..9692566 | 448..841 | 1785 | 97.5 | Plus |
chr2R | 21145070 | chr2R | 9690968..9691084 | 238..354 | 585 | 100 | Plus |
chr2R | 21145070 | chr2R | 9682143..9682280 | 1..136 | 575 | 97.8 | Plus |
chr2R | 21145070 | chr2R | 9682444..9682543 | 138..237 | 500 | 100 | Plus |
chr2R | 21145070 | chr2R | 9691704..9691797 | 355..448 | 470 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 13804838..13805234 | 448..844 | 1985 | 100 | Plus |
2R | 25286936 | 2R | 13794803..13794938 | 1..136 | 680 | 100 | Plus |
2R | 25286936 | 2R | 13803625..13803741 | 238..354 | 585 | 100 | Plus |
2R | 25286936 | 2R | 13795105..13795205 | 137..237 | 505 | 100 | Plus |
2R | 25286936 | 2R | 13804363..13804456 | 355..448 | 470 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 13806037..13806433 | 448..844 | 1985 | 100 | Plus |
2R | 25260384 | 2R | 13796002..13796137 | 1..136 | 680 | 100 | Plus |
2R | 25260384 | 2R | 13804824..13804940 | 238..354 | 585 | 100 | Plus |
2R | 25260384 | 2R | 13796304..13796404 | 137..237 | 505 | 100 | Plus |
2R | 25260384 | 2R | 13805562..13805655 | 355..448 | 470 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 9682143..9682286 | 1..140 | 95 | -> | Plus |
chr2R | 9682447..9682543 | 141..237 | 100 | -> | Plus |
chr2R | 9690968..9691084 | 238..354 | 100 | -> | Plus |
chr2R | 9691704..9691796 | 355..447 | 100 | -> | Plus |
chr2R | 9692179..9692566 | 448..841 | 97 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr50Cb-RA | 1..537 | 208..744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr50Cb-RA | 1..537 | 208..744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr50Cb-RA | 1..537 | 208..744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr50Cb-RA | 1..537 | 208..744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr50Cb-RA | 1..537 | 208..744 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr50Cb-RA | 1..841 | 1..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr50Cb-RA | 1..841 | 1..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr50Cb-RA | 27..867 | 1..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr50Cb-RA | 1..841 | 1..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Cpr50Cb-RA | 27..867 | 1..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13794803..13794938 | 1..136 | 100 | -> | Plus |
2R | 13795105..13795205 | 137..237 | 100 | -> | Plus |
2R | 13803625..13803741 | 238..354 | 100 | -> | Plus |
2R | 13804363..13804455 | 355..447 | 100 | -> | Plus |
2R | 13804838..13805231 | 448..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13794803..13794938 | 1..136 | 100 | -> | Plus |
2R | 13795105..13795205 | 137..237 | 100 | -> | Plus |
2R | 13803625..13803741 | 238..354 | 100 | -> | Plus |
2R | 13804363..13804455 | 355..447 | 100 | -> | Plus |
2R | 13804838..13805231 | 448..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13794803..13794938 | 1..136 | 100 | -> | Plus |
2R | 13795105..13795205 | 137..237 | 100 | -> | Plus |
2R | 13803625..13803741 | 238..354 | 100 | -> | Plus |
2R | 13804363..13804455 | 355..447 | 100 | -> | Plus |
2R | 13804838..13805231 | 448..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 9691130..9691246 | 238..354 | 100 | -> | Plus |
arm_2R | 9691868..9691960 | 355..447 | 100 | -> | Plus |
arm_2R | 9682308..9682443 | 1..136 | 100 | -> | Plus |
arm_2R | 9682610..9682710 | 137..237 | 100 | -> | Plus |
arm_2R | 9692343..9692736 | 448..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13806037..13806430 | 448..841 | 100 | Plus | |
2R | 13796002..13796137 | 1..136 | 100 | -> | Plus |
2R | 13796304..13796404 | 137..237 | 100 | -> | Plus |
2R | 13804824..13804940 | 238..354 | 100 | -> | Plus |
2R | 13805562..13805654 | 355..447 | 100 | -> | Plus |
Translation from 207 to 743
> GH20904.pep MMSFKSFVLLSLSLAAISAYAYAQIAPGSNAYLPPTKNGYDYSEPKTPFK PGPPGRPAAPGPRPPAPPGTPRNIPGQPGDDHVHVPGMPYDFEYAVQDPE TANDYAHKASSDGDVVTGEYRVQMPDGRTQIVRYTADWKTGYHADVSYEG EATYPQGPQPGARGGGGGGAGGAGGYKY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13710-PA | 174 | GF13710-PA | 1..155 | 1..156 | 632 | 85.9 | Plus |
Dana\GF10053-PA | 1377 | GF10053-PA | 1278..1358 | 64..146 | 177 | 44.7 | Plus |
Dana\GF12672-PA | 213 | GF12672-PA | 126..184 | 90..149 | 161 | 51.7 | Plus |
Dana\GF11408-PA | 587 | GF11408-PA | 320..382 | 90..153 | 153 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20401-PA | 181 | GG20401-PA | 1..181 | 1..178 | 884 | 97.2 | Plus |
Dere\GG16042-PA | 1211 | GG16042-PA | 1136..1192 | 90..146 | 176 | 54.4 | Plus |
Dere\GG20868-PA | 217 | GG20868-PA | 128..186 | 90..149 | 161 | 51.7 | Plus |
Dere\GG20628-PA | 619 | GG20628-PA | 345..407 | 90..153 | 153 | 45.3 | Plus |
Dere\GG20400-PA | 810 | GG20400-PA | 746..806 | 90..150 | 143 | 51.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21033-PA | 173 | GH21033-PA | 1..155 | 1..158 | 626 | 83.5 | Plus |
Dgri\GH17180-PA | 2075 | GH17180-PA | 2000..2056 | 90..146 | 173 | 52.6 | Plus |
Dgri\GH10353-PA | 81 | GH10353-PA | 6..62 | 90..146 | 161 | 52.6 | Plus |
Dgri\GH23088-PA | 605 | GH23088-PA | 313..375 | 90..153 | 153 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cpr50Cb-PA | 178 | CG6305-PA | 1..178 | 1..178 | 985 | 100 | Plus |
resilin-PA | 620 | CG15920-PA | 272..428 | 26..176 | 209 | 35.4 | Plus |
Cpr56F-PA | 217 | CG9036-PA | 2..203 | 5..175 | 202 | 30.8 | Plus |
Cpr76Bd-PD | 1228 | CG9299-PD | 1108..1209 | 57..146 | 176 | 37.3 | Plus |
Cpr76Bd-PB | 1228 | CG9299-PB | 1108..1209 | 57..146 | 176 | 37.3 | Plus |
Cpr76Bd-PC | 1231 | CG9299-PC | 1111..1212 | 57..146 | 176 | 37.3 | Plus |
Cpr50Ca-PA | 815 | CG13338-PA | 751..811 | 90..150 | 152 | 51.6 | Plus |
Cpr76Bb-PA | 198 | CG9290-PA | 86..182 | 90..178 | 141 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18634-PA | 173 | GI18634-PA | 27..153 | 27..156 | 555 | 84.6 | Plus |
Dmoj\GI11793-PA | 1160 | GI11793-PA | 1060..1141 | 66..146 | 176 | 43.9 | Plus |
Dmoj\GI18779-PA | 206 | GI18779-PA | 117..175 | 90..149 | 159 | 51.7 | Plus |
Dmoj\GI21153-PA | 589 | GI21153-PA | 299..357 | 90..149 | 149 | 46.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17473-PA | 176 | GL17473-PA | 1..159 | 1..160 | 666 | 88.1 | Plus |
Dper\GL20939-PA | 1339 | GL20939-PA | 1239..1320 | 66..146 | 175 | 43.9 | Plus |
Dper\GL16837-PA | 227 | GL16837-PA | 1..192 | 1..149 | 165 | 30.3 | Plus |
Dper\GL11800-PA | 621 | GL11800-PA | 312..374 | 90..153 | 157 | 46.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19503-PA | 176 | GA19503-PA | 1..159 | 1..160 | 666 | 88.1 | Plus |
Dpse\GA28637-PA | 1341 | GA28637-PA | 1241..1322 | 66..146 | 175 | 43.9 | Plus |
Dpse\GA21496-PB | 227 | GA21496-PB | 132..190 | 90..149 | 161 | 51.7 | Plus |
Dpse\GA24081-PA | 621 | GA24081-PA | 310..372 | 90..153 | 157 | 46.9 | Plus |
Dpse\GA12217-PA | 841 | GA12217-PA | 777..837 | 90..150 | 143 | 51.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21489-PA | 178 | GM21489-PA | 1..178 | 1..178 | 894 | 98.3 | Plus |
Dsec\GM19583-PA | 1231 | GM19583-PA | 1156..1212 | 90..146 | 176 | 54.4 | Plus |
Dsec\GM21722-PA | 623 | GM21722-PA | 345..407 | 90..153 | 151 | 45.3 | Plus |
Dsec\GM21488-PA | 813 | GM21488-PA | 749..809 | 90..150 | 144 | 51.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10983-PA | 178 | GD10983-PA | 1..178 | 1..178 | 902 | 99.4 | Plus |
Dsim\GD14810-PA | 648 | GD14810-PA | 573..629 | 90..146 | 175 | 54.4 | Plus |
Dsim\GD25285-PA | 215 | GD25285-PA | 126..184 | 90..149 | 160 | 51.7 | Plus |
Dsim\GD11218-PA | 609 | GD11218-PA | 331..393 | 90..153 | 151 | 45.3 | Plus |
Dsim\GD10982-PA | 826 | GD10982-PA | 762..822 | 90..150 | 143 | 51.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21646-PA | 174 | GJ21646-PA | 1..154 | 1..156 | 601 | 81.4 | Plus |
Dvir\GJ13496-PA | 1359 | GJ13496-PA | 1284..1340 | 90..146 | 173 | 52.6 | Plus |
Dvir\GJ21806-PA | 229 | GJ21806-PA | 139..197 | 90..149 | 160 | 51.7 | Plus |
Dvir\GJ21001-PA | 633 | GJ21001-PA | 358..418 | 90..151 | 148 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17855-PA | 176 | GK17855-PA | 1..163 | 1..163 | 637 | 83.4 | Plus |
Dwil\GK20224-PA | 1363 | GK20224-PA | 1265..1343 | 66..146 | 169 | 44.6 | Plus |
Dwil\GK19531-PA | 134 | GK19531-PA | 42..101 | 89..149 | 155 | 50.8 | Plus |
Dwil\GK15914-PA | 605 | GK15914-PA | 341..403 | 90..153 | 150 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12561-PA | 180 | GE12561-PA | 1..180 | 1..178 | 889 | 98.3 | Plus |
Dyak\GE23208-PA | 929 | GE23208-PA | 809..910 | 57..146 | 176 | 38.2 | Plus |
Dyak\GE19607-PA | 1197 | GE19607-PA | 1077..1178 | 57..146 | 176 | 38.2 | Plus |
Dyak\GE13808-PA | 215 | GE13808-PA | 126..184 | 90..149 | 161 | 51.7 | Plus |
Dyak\GE11818-PA | 622 | GE11818-PA | 337..399 | 90..153 | 152 | 45.3 | Plus |
Translation from 207 to 743
> GH20904.hyp MMSFKSFVLLSLSLAAISAYAYAQIAPGSNAYLPPTKNGYDYSEPKTPFK PGPPGRPAAPGPRPPAPPGTPRNIPGQPGDDHVHVPGMPYDFEYAVQDPE TANDYAHKASSDGDVVTGEYRVQMPDGRTQIVRYTADWKTGYHADVSYEG EATYPQGPQPGARGGGGGGAGGAGGYKY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Cpr50Cb-PA | 178 | CG6305-PA | 1..178 | 1..178 | 985 | 100 | Plus |
resilin-PA | 620 | CG15920-PA | 272..428 | 26..176 | 209 | 35.4 | Plus |
Cpr56F-PA | 217 | CG9036-PA | 2..203 | 5..175 | 202 | 30.8 | Plus |
Cpr76Bd-PD | 1228 | CG9299-PD | 1108..1209 | 57..146 | 176 | 37.3 | Plus |
Cpr76Bd-PB | 1228 | CG9299-PB | 1108..1209 | 57..146 | 176 | 37.3 | Plus |