BDGP Sequence Production Resources |
Search the DGRC for GH20963
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 209 |
Well: | 63 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6661-RA |
Protein status: | GH20963.pep: gold |
Preliminary Size: | 1819 |
Sequenced Size: | 1927 |
Gene | Date | Evidence |
---|---|---|
CG6661 | 2001-01-01 | Release 2 assignment |
CG6661 | 2001-09-19 | Blastp of sequenced clone |
CG6661 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6661 | 2008-04-29 | Release 5.5 accounting |
CG6661 | 2008-08-15 | Release 5.9 accounting |
CG6661 | 2008-12-18 | 5.12 accounting |
1927 bp (1927 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058431
> GH20963.complete ATACACTTAAGTATACGAATATTAAACTGGCAAATGTAGAATAAATTCCT GTTAAAAGCTTCAAATTAAAATTGTCCAAGCAATGCTTAAGCTGGGACTC GCGGTCCCCACTCGATGGTCCTTCAGATGTCGTCGCCTTGGTGGAATGGC TATCATTAAAGGCGAGACAAAAATCTCCGTGGACAAGCAGAAAGCAGTCC AGCCGGAACAGGATGAGGACCAACAAGAGGTCGAGCCGGATTCCCAGCCG GCGGAAGAAAATCCAAGTATTCACAGGAACCAGAGAGTATTAGTTAATCA TGCCATTCAGGAGATTCAGCACAGGCCGTTGGAGGTGCCCACAATTATCG GCGATGATACAGTGTACACCATGGACACTCAGCGTGTTTGCTGCCCGCAT CACCTGCAGACGAACTTGGCTCACGTCTACTACGCCAATCGCAAGCAAAT CGAGGCGGCAATTAAGTCTGCTCTTTCGGCGCAAGGAACTTGGAGTCTAG TTCCCATCGCCCAGCGACTGGCCATTTGGCGACGTGCCGCCACCATTATC GAGGAGGACGAGCTGCGGCTGAGAGTGTTCCTCATGATGACGCTGAGCAA AACCGCCGACGATGCGACGCGGGACATTCGGCGGCTACTCACATCGCTGA GGGCCAATGCTGACTATTTGGAGCATCTGTCCGAGCTGCGCTTTGAGATC CAGGGTGATATGAATGTATTCCCCAGCTTTCATTTGCGACCCATGGATGG ATTTGTGGCCGCACTGGCACCATTTGAATCGGTGGCCTTGTCATCCAGCT TGGCCCTCTGTCCGGCGCTCATGGGCAACACGGTGTTGTGGAATCCCTCA TTGGAAGTGGCACCAGTGAGCTATTTAATTTTCAGAGCCTTCCAGGAGGC GGGTTTGCCCAGCGGCGTTATCAACTTTGTGCCGGCCAACGAGCGTCTGT TCTTGGACACCATCACGGATGCCGTGCACTTTGCCGGACTGAATACTCAA GCGAGTGCAGCTTTTTACAGGCATGTGCACAAGCTGGTGAGCGATCGAAT GGAGCGATACATCTGTTTTCCTCGTCTGGTGGCCGAGTGCCCGGGTCAGA ACTTTCATTTTGTCCATGCCAGCGCTAAGGTGGAATCTGTCGTCTCAGCC ACCGTGCAGGCGGCCTTTGGCTTTGCCGGACAGTATGCCAACTCGCTCTC CCGGATGTATGTGCCCTCGTCAATGTGGCCACGCCTCAGGGAGGAGTTGG TGGAGGCCACGGAGCAACTGACCATCGGAGACCCCATCGAATCGGAAACG GATATAGGAGCGATGGTGCATATAAATGACTTCCGGCGGATGCAGAAACT ACTGCAGCGCACCAAGAACATGGAGCAGTTGTGCGGAGGCAGCTGTGATG ACAGCACTGGTAGATTCGTTGATCCAACGATTGTCCGGGTGTCGGATCCA TTGGATCCACTGCTGTGTGAGCCCTGCTGCGGACCGTTCTTGCCGGTGTT CGTCTATTCGGACGATTCCTTCAGTGAGGCTCTCAAGCTTGCCGCCAATC AGTCCAGATACGCGCTCTCCGGCTCCATATTCGCAAGTCAGGATGAGGTT ATCCTTCACTGCCTGAACCAACTGCGAATGTCCGCTAGTAATCTCTACGT GAATGAGCGATGCACGGGTAGCACGTACGGGCTGACTCCCTTTGGTGGAA ATCGGTTGTCCGGGACAAACGATAAATCCGGATCTGCCTACTTCCTAATG CGCTGGAGCTCGCCGCTGCTCATCGAGGAGACTGTTGATGGTCCACCTCC CATGCGTGGATCAAATACGTTTCCCTGAGCTTGCTGATGGGTGGCGGGTG TTTCAAAATTACAATAAATGTATTTGCAGTGGCGTTTTTACTATTTAACC ACAAACTGGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6661-RA | 1976 | CG6661-RA | 68..1976 | 1..1909 | 9545 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 14024945..14026853 | 1..1909 | 9485 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pncr014:3L-RA | 2204 | CR33944-RA | 1..1890 | 1890..1 | 9450 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 14034843..14036756 | 1..1914 | 9555 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 14027943..14029856 | 1..1914 | 9555 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 14024945..14026853 | 1..1909 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6661-RA | 1..1746 | 83..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6661-RA | 1..1746 | 83..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6661-RA | 1..1746 | 83..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6661-RA | 1..1746 | 83..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6661-RA | 1..1746 | 83..1828 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pncr014:3L-RA | 1..1890 | 1..1890 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6661-RA | 68..1975 | 1..1908 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6661-RA | 68..1976 | 1..1909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6661-RA | 68..1976 | 1..1909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6661-RA | 68..1975 | 1..1908 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6661-RA | 68..1976 | 1..1909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 14034843..14036751 | 1..1909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 14034843..14036751 | 1..1909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 14034843..14036751 | 1..1909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 14027943..14029851 | 1..1909 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 14027943..14029851 | 1..1909 | 100 | Plus |
Translation from 82 to 1827
> GH20963.pep MLKLGLAVPTRWSFRCRRLGGMAIIKGETKISVDKQKAVQPEQDEDQQEV EPDSQPAEENPSIHRNQRVLVNHAIQEIQHRPLEVPTIIGDDTVYTMDTQ RVCCPHHLQTNLAHVYYANRKQIEAAIKSALSAQGTWSLVPIAQRLAIWR RAATIIEEDELRLRVFLMMTLSKTADDATRDIRRLLTSLRANADYLEHLS ELRFEIQGDMNVFPSFHLRPMDGFVAALAPFESVALSSSLALCPALMGNT VLWNPSLEVAPVSYLIFRAFQEAGLPSGVINFVPANERLFLDTITDAVHF AGLNTQASAAFYRHVHKLVSDRMERYICFPRLVAECPGQNFHFVHASAKV ESVVSATVQAAFGFAGQYANSLSRMYVPSSMWPRLREELVEATEQLTIGD PIESETDIGAMVHINDFRRMQKLLQRTKNMEQLCGGSCDDSTGRFVDPTI VRVSDPLDPLLCEPCCGPFLPVFVYSDDSFSEALKLAANQSRYALSGSIF ASQDEVILHCLNQLRMSASNLYVNERCTGSTYGLTPFGGNRLSGTNDKSG SAYFLMRWSSPLLIEETVDGPPPMRGSNTFP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24590-PA | 578 | GF24590-PA | 1..575 | 1..577 | 2303 | 73.5 | Plus |
Dana\GF23503-PA | 571 | GF23503-PA | 69..565 | 84..578 | 1018 | 39.7 | Plus |
Dana\GF18051-PA | 610 | GF18051-PA | 62..566 | 67..567 | 777 | 34.6 | Plus |
Dana\GF22728-PA | 520 | GF22728-PA | 65..498 | 109..550 | 211 | 23.4 | Plus |
Dana\GF17265-PA | 507 | GF17265-PA | 68..488 | 120..553 | 199 | 22.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15668-PA | 580 | GG15668-PA | 1..580 | 1..581 | 2849 | 90.5 | Plus |
Dere\GG13195-PA | 574 | GG13195-PA | 40..568 | 56..578 | 1021 | 39.1 | Plus |
Dere\GG11090-PA | 619 | GG11090-PA | 71..569 | 74..567 | 792 | 34.9 | Plus |
Dere\GG12233-PA | 509 | GG12233-PA | 136..490 | 195..553 | 215 | 24.7 | Plus |
Dere\GG25345-PA | 520 | GG25345-PA | 68..498 | 112..550 | 203 | 22.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17138-PA | 573 | GH17138-PA | 54..559 | 67..567 | 1003 | 39.7 | Plus |
Dgri\GH13227-PA | 518 | GH13227-PA | 67..496 | 112..550 | 261 | 24.6 | Plus |
Dgri\GH13324-PA | 521 | GH13324-PA | 66..499 | 109..550 | 228 | 24 | Plus |
Dgri\GH18609-PA | 501 | GH18609-PA | 52..476 | 111..546 | 203 | 23.2 | Plus |
Dgri\GH13317-PA | 913 | GH13317-PA | 427..896 | 81..550 | 180 | 22.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6661-PA | 581 | CG6661-PA | 1..581 | 1..581 | 3019 | 100 | Plus |
P5CDh1-PE | 574 | CG7145-PE | 72..560 | 84..567 | 964 | 39.9 | Plus |
P5CDh1-PF | 574 | CG7145-PF | 72..560 | 84..567 | 964 | 39.9 | Plus |
P5CDh1-PD | 574 | CG7145-PD | 72..560 | 84..567 | 964 | 39.9 | Plus |
P5CDh1-PB | 574 | CG7145-PB | 72..560 | 84..567 | 964 | 39.9 | Plus |
P5CDh1-PA | 574 | CG7145-PA | 72..560 | 84..567 | 964 | 39.9 | Plus |
P5CDh2-PG | 608 | CG33092-PG | 58..563 | 67..567 | 789 | 34.8 | Plus |
P5CDh2-PE | 609 | CG33092-PE | 59..564 | 67..567 | 789 | 34.8 | Plus |
P5CDh2-PD | 609 | CG33092-PD | 59..564 | 67..567 | 789 | 34.8 | Plus |
P5CDh2-PC | 614 | CG33092-PC | 64..569 | 67..567 | 789 | 34.8 | Plus |
P5CDh2-PB | 614 | CG33092-PB | 64..569 | 67..567 | 789 | 34.8 | Plus |
P5CDh2-PA | 614 | CG33092-PA | 64..569 | 67..567 | 789 | 34.8 | Plus |
Aldh-PB | 520 | CG3752-PB | 68..498 | 112..550 | 208 | 22.4 | Plus |
Aldh-PA | 520 | CG3752-PA | 68..498 | 112..550 | 208 | 22.4 | Plus |
Ssadh-PE | 509 | CG4685-PE | 169..490 | 223..553 | 205 | 25.3 | Plus |
Ssadh-PD | 509 | CG4685-PD | 169..490 | 223..553 | 205 | 25.3 | Plus |
Ssadh-PC | 509 | CG4685-PC | 169..490 | 223..553 | 205 | 25.3 | Plus |
Ssadh-PB | 509 | CG4685-PB | 169..490 | 223..553 | 205 | 25.3 | Plus |
Ssadh-PA | 509 | CG4685-PA | 169..490 | 223..553 | 205 | 25.3 | Plus |
CG8665-PA | 913 | CG8665-PA | 461..890 | 112..544 | 184 | 22.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11746-PA | 567 | GI11746-PA | 48..561 | 67..578 | 1023 | 39.8 | Plus |
Dmoj\GI22191-PA | 608 | GI22191-PA | 58..564 | 62..567 | 795 | 34.6 | Plus |
Dmoj\GI17663-PA | 519 | GI17663-PA | 64..497 | 109..550 | 219 | 23.3 | Plus |
Dmoj\GI10356-PA | 489 | GI10356-PA | 149..470 | 223..553 | 194 | 24.3 | Plus |
Dmoj\GI12253-PA | 817 | GI12253-PA | 362..794 | 109..544 | 184 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25324-PA | 574 | GL25324-PA | 55..568 | 67..578 | 1005 | 38.8 | Plus |
Dper\GL23801-PA | 615 | GL23801-PA | 60..567 | 66..567 | 752 | 32.1 | Plus |
Dper\GL26145-PA | 521 | GL26145-PA | 57..499 | 99..550 | 221 | 23.2 | Plus |
Dper\GL26144-PA | 520 | GL26144-PA | 66..498 | 109..550 | 221 | 23.4 | Plus |
Dper\GL21675-PA | 489 | GL21675-PA | 149..464 | 223..546 | 217 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20135-PA | 574 | GA20135-PA | 55..568 | 67..578 | 1004 | 38.8 | Plus |
Dpse\GA17274-PA | 615 | GA17274-PA | 60..567 | 66..567 | 751 | 32.3 | Plus |
Dpse\GA22228-PA | 143 | GA22228-PA | 1..142 | 168..308 | 262 | 42.7 | Plus |
Dpse\GA18355-PA | 505 | GA18355-PA | 165..478 | 223..544 | 225 | 25.7 | Plus |
Dpse\GA17661-PA | 521 | GA17661-PA | 57..499 | 99..550 | 221 | 23.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25448-PA | 580 | GM25448-PA | 1..580 | 1..581 | 2987 | 95.2 | Plus |
Dsec\GM22106-PA | 574 | GM22106-PA | 52..568 | 64..578 | 1021 | 39.7 | Plus |
Dsec\GM26382-PA | 613 | GM26382-PA | 64..570 | 67..567 | 799 | 35.2 | Plus |
Dsec\GM17439-PA | 520 | GM17439-PA | 68..498 | 112..550 | 208 | 22.8 | Plus |
Dsec\GM10233-PA | 509 | GM10233-PA | 169..490 | 223..553 | 208 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14474-PA | 580 | GD14474-PA | 1..580 | 1..581 | 2978 | 95.2 | Plus |
Dsim\GD17558-PA | 574 | GD17558-PA | 52..568 | 64..578 | 1018 | 39.7 | Plus |
Dsim\GD20905-PA | 613 | GD20905-PA | 64..570 | 67..567 | 804 | 35.2 | Plus |
Dsim\GD18186-PA | 509 | GD18186-PA | 169..490 | 223..553 | 211 | 25.3 | Plus |
Dsim\GD23600-PA | 538 | GD23600-PA | 85..516 | 104..550 | 208 | 22.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13456-PA | 569 | GJ13456-PA | 50..563 | 67..578 | 1003 | 39.3 | Plus |
Dvir\GJ24310-PA | 604 | GJ24310-PA | 57..562 | 66..567 | 849 | 36 | Plus |
Dvir\GJ17859-PA | 519 | GJ17859-PA | 64..497 | 109..550 | 220 | 23.5 | Plus |
Dvir\GJ10208-PA | 501 | GJ10208-PA | 161..476 | 223..546 | 189 | 24 | Plus |
Dvir\GJ24150-PA | 485 | GJ24150-PA | 58..467 | 128..550 | 180 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17042-PA | 575 | GK17042-PA | 1..564 | 1..571 | 1887 | 59.1 | Plus |
Dwil\GK12188-PA | 569 | GK12188-PA | 50..563 | 67..578 | 1005 | 39 | Plus |
Dwil\GK22325-PA | 594 | GK22325-PA | 50..534 | 60..567 | 739 | 32.6 | Plus |
Dwil\GK24201-PA | 521 | GK24201-PA | 66..499 | 109..550 | 242 | 24.2 | Plus |
Dwil\GK14395-PA | 504 | GK14395-PA | 164..477 | 223..544 | 205 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21997-PA | 580 | GE21997-PA | 1..580 | 1..581 | 2835 | 90 | Plus |
Dyak\GE19517-PA | 573 | GE19517-PA | 53..567 | 66..578 | 1017 | 39.6 | Plus |
Dyak\GE10250-PA | 619 | GE10250-PA | 64..569 | 67..567 | 805 | 35 | Plus |
Dyak\GE18837-PA | 520 | GE18837-PA | 68..498 | 112..550 | 210 | 22.6 | Plus |
Dyak\GE10681-PA | 509 | GE10681-PA | 169..490 | 223..553 | 208 | 24.4 | Plus |
Translation from 82 to 1827
> GH20963.hyp MLKLGLAVPTRWSFRCRRLGGMAIIKGETKISVDKQKAVQPEQDEDQQEV EPDSQPAEENPSIHRNQRVLVNHAIQEIQHRPLEVPTIIGDDTVYTMDTQ RVCCPHHLQTNLAHVYYANRKQIEAAIKSALSAQGTWSLVPIAQRLAIWR RAATIIEEDELRLRVFLMMTLSKTADDATRDIRRLLTSLRANADYLEHLS ELRFEIQGDMNVFPSFHLRPMDGFVAALAPFESVALSSSLALCPALMGNT VLWNPSLEVAPVSYLIFRAFQEAGLPSGVINFVPANERLFLDTITDAVHF AGLNTQASAAFYRHVHKLVSDRMERYICFPRLVAECPGQNFHFVHASAKV ESVVSATVQAAFGFAGQYANSLSRMYVPSSMWPRLREELVEATEQLTIGD PIESETDIGAMVHINDFRRMQKLLQRTKNMEQLCGGSCDDSTGRFVDPTI VRVSDPLDPLLCEPCCGPFLPVFVYSDDSFSEALKLAANQSRYALSGSIF ASQDEVILHCLNQLRMSASNLYVNERCTGSTYGLTPFGGNRLSGTNDKSG SAYFLMRWSSPLLIEETVDGPPPMRGSNTFP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6661-PA | 581 | CG6661-PA | 1..581 | 1..581 | 3019 | 100 | Plus |
P5CDh1-PE | 574 | CG7145-PE | 72..560 | 84..567 | 964 | 39.9 | Plus |
P5CDh1-PF | 574 | CG7145-PF | 72..560 | 84..567 | 964 | 39.9 | Plus |
P5CDh1-PD | 574 | CG7145-PD | 72..560 | 84..567 | 964 | 39.9 | Plus |
P5CDh1-PB | 574 | CG7145-PB | 72..560 | 84..567 | 964 | 39.9 | Plus |