BDGP Sequence Production Resources |
Search the DGRC for GH21160
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 211 |
Well: | 60 |
Vector: | pOT2 |
Associated Gene/Transcript | sprt-RA |
Protein status: | GH21160.pep: gold |
Preliminary Size: | 3660 |
Sequenced Size: | 2795 |
Gene | Date | Evidence |
---|---|---|
CG9026 | 2001-01-01 | Release 2 assignment |
CG30023 | 2001-07-04 | Blastp of sequenced clone |
CG30023 | 2003-01-01 | Sim4 clustering to Release 3 |
sprt | 2008-04-29 | Release 5.5 accounting |
sprt | 2008-08-15 | Release 5.9 accounting |
sprt | 2008-12-18 | 5.12 accounting |
2795 bp (2795 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051563
> GH21160.complete ACGCGATCGGTTGTGCTCGCACTCTCCGTGTAATCCGAACCCGATTTTGT GATTAGCCCTCCGCTGCGCCTGCGTGAATTCGTGGACCTTCTTCAATCAA CCTGAACCTACGTGAATTTGTGCGTTTTGTTTACTTGTTTACTTGGCCCA TTTGAAAGCAAATTTCCTGCATCCTGCATAAACAGAGGAAACGCACAGCG GAAATAGTATGAGTTATTAAGTCGCTGCAAACGGAAATAATTAACAAAAA AAAAATAAAACTAAATGTGCCGATCGCGTTTTAGCAACGGTTTCGATGCG GTTTCAAACACAATCGGTTTAAGCATTGACATCATTGATTTATGTCCCAA GTGTAAATAATTCGCACAATACAATACACCAAATTGAGGCTTCCCTCCCT CCACCAAATCAAACAAATCAAATGCAATGAAATGAAATGTTGCCATTAAT TTGCGCACATTGCCATTGTTCAGAGTTATTGGTTGACTTTTAACTGGGAT CCGTACTACTTTAAGCTGAGCTGTAAACGAAGACCACGAGGGTTTTCCAT TATGGACACCGGAAGTGTGGTTAGTGAACCGATTTCCGCGCATCATCGCG CCTTCGCCAAACAGAAGTCCGCCTCCATGACCATTCTCAATCCGAAGGGT TGTGGCAGTGCCGTCAAGTACAGTCTGCACTCGACTGCAGAGACGAACCA GGAGACTGCCAGTACCACGACCACCTCTACCCATTGTTCCACAACTGGAA GAAGGCGCAAGGGTGGCTCCCTGGGCGGTACTCTCTCCTCGCGATCGACG CGCAGCGAATCCAAGGAATTGCGATCGGCTCTTCAGGATCGGGAGGCTGT CATCCAGAATCTGCGTATACAGCTTTGTCTGGGCAAACTGCCACGTCCCA CGGGACCACCGCTGGATGAGTCCGAGAAGCCGGCGGCTGAGCAAAAACTA AACAGACTGAAGACGGAGGCGGAGAATAAGCGAATTAAGATCAAGAACCT GAAGAGTGCCCTGGAGAAGCTGGACATCACAGACAACATAGACATCCGCA TCCGTCAAGCCGAATTGGAATACGCACTCGGCAGAGAAGAACTCCAGATG CTCTCGATTGTGGAGGAGGCTCGCGCCTTGCAGGCACGTCTGGAAAAGTC CAAGCCCGAGGCGCAGACCCTCTACAACATCATCAGCTCTGGAGTCTCCC TGAGTCTGCACGCCGTGCATGCCACCTCGGGAAGATGGGCAGTTCAACAG AGGACAGACCAGCCGGGTTTCTACGTAGAATGGGCTTTAGAGGGTGATGG CTTGTACAAGGGCGATCGCATTTTGGAGATCAACGGACGACTGGTAACCG GAAAATCCAAGGAAGAGCTGCAGAAGCAAGTAGGAAACTCTGGCAAGTGT CAGATGGTTGTACTCCGCAAGAAGTCCGTACCTATACCACAAAAGCAACT AGACCAGGAGAAGGAGAACAACATGAGGCTGCAGCATCGCATATCGTACC TGGAAGAGCAGGTGCGAGAACTGCAGACAGTCAAGGAGCATCATCCATCG CAACAGCAGCAGCAGCAGCAGCAGCAACAGCAAAATCCACAGCAAAATCC ACAGCAAAATCCACAGCAGACATCCTCCAATCAATCTCAGCATGTGACCA GCATCAGCATATCATCACCTCCATCAACACCGCCCGAGAAACCGTTGATC TTTCAGCGGGGCAACTATATTACCACTTTGGTGGGGGGCAAACCCATCGA GCTGATGGGTGACGACATGGCCTCGACACAAACCCCTCCCGGACATGTAA CCAAAACACTGATCAAGGAGAATACCCACATCGATTTGAGAGATCGTCTG TCGCACATGTACTCCATGCCCTCCAAATCGCTGTCCGCCTCGAAGATCTC GATTAATAGCGATTCTGCCTATATGCAGCACCATCGACGTGATAAGGAGC GCCATCGCGATCGCCAGCACCGGGAACGCCCCAGAGATCCTCTCCAGCAA CAGCAGCAACTGCATCGCGAACATCTCATGAGCACGCACGCACGCAGTGT AGAGCACCTGAATCATTACAATGGACTGGATCGTCGCCGAGACACGCCCC GACAAAGTGAGTCGAACACACTTCGAGCCCGCCTGCCCAGCGATATGAGG AGTGTAAAATCCCTGGATTTCGATAGCGAAAACGAATCGAAGCCTGCGAC TGAGACGCGTACCACTAGACCCACTCCGCCCAAGAAACCCCTCCGGCTAT CGCTGCAACGAGCCCAAAGTCTGCAGACCGTGGAGCTGCACCCCTGTGCG GATATCGAACGAAAGCGGCCCATGAAGAGGGTCCACCACAACAACAACAA CAACAACAAAGGTGGAGAATCACCGACTGGAGAGGGCCAGACCATGCTCA TCGAGAACTGCAGTCCCATGCACACGGCTTCCCTCGGCAGGCACAAGCTC ATCTAGAAACCCGATCCCAATCCAACCAAAACTAATTGTTAATCGAAGTA GCTTAATCCTCGACCGATCCTAACCGGCGGTTAAACCCAAAAAACAGGCG GACATGTGCAAAATTACAGTAGGCAATATAATTTTAACCAGCTCCCAAGT GGAAAGTTTCTTATTATGTAGTAGCAGTAGTATGTACTTACATTCTATAT CTTGTATAAGTAGGGCTTGGCTATCAACATTTAGTATTGAGAGAATCAAT AATTAAGAGTTTTTGTATGTACGATGATTTTATTAGCACAATTTACAAAT GTGAATACACGAATATTTTCACCTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sprt-RA | 2872 | sprt-RA | 88..2862 | 1..2775 | 13875 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 7272998..7274038 | 2074..1034 | 5190 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 7272185..7272885 | 2774..2074 | 3490 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 7284350..7284867 | 518..1 | 2575 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 7274105..7274509 | 1033..629 | 2010 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 7278517..7278628 | 629..518 | 560 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 11385556..11386596 | 2074..1034 | 5205 | 100 | Minus |
2R | 25286936 | 2R | 11384742..11385443 | 2775..2074 | 3510 | 100 | Minus |
2R | 25286936 | 2R | 11396894..11397411 | 518..1 | 2590 | 100 | Minus |
2R | 25286936 | 2R | 11386663..11387067 | 1033..629 | 2025 | 100 | Minus |
2R | 25286936 | 2R | 11391071..11391182 | 629..518 | 560 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 11386755..11387795 | 2074..1034 | 5205 | 100 | Minus |
2R | 25260384 | 2R | 11385941..11386642 | 2775..2074 | 3510 | 100 | Minus |
2R | 25260384 | 2R | 11398093..11398610 | 518..1 | 2590 | 100 | Minus |
2R | 25260384 | 2R | 11387862..11388266 | 1033..629 | 2025 | 100 | Minus |
2R | 25260384 | 2R | 11392270..11392381 | 629..518 | 560 | 100 | Minus |
Unimproved_211000022255336_918_2978 | 2060 | Unimproved_211000022255336_918_2978 | 257..310 | 54..1 | 195 | 90.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2320..2535 | 1467..1681 | 255 | 62.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2312..2412 | 1925..2025 | 127 | 58.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2436..2529 | 1926..2025 | 116 | 62 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 7272998..7273453 | 1619..2074 | 99 | == | Minus |
chr2R | 7272185..7272884 | 2075..2774 | 96 | <- | Minus |
chr2R | 7273523..7274038 | 1034..1549 | 100 | <- | Minus |
chr2R | 7274105..7274508 | 630..1033 | 99 | <- | Minus |
chr2R | 7278517..7278627 | 519..629 | 100 | <- | Minus |
chr2R | 7284350..7284867 | 1..518 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sprt-RA | 1..1905 | 552..2456 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sprt-RA | 1..1905 | 552..2456 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sprt-RA | 1..1905 | 552..2456 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sprt-RA | 1..1905 | 552..2456 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sprt-RA | 1..1905 | 552..2456 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sprt-RA | 20..2793 | 1..2774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sprt-RA | 20..2793 | 1..2774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sprt-RA | 22..2795 | 1..2774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sprt-RA | 20..2793 | 1..2774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sprt-RA | 22..2795 | 1..2774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11384743..11385442 | 2075..2774 | 100 | <- | Minus |
2R | 11385556..11386596 | 1034..2074 | 100 | <- | Minus |
2R | 11386663..11387066 | 630..1033 | 100 | <- | Minus |
2R | 11391071..11391181 | 519..629 | 100 | <- | Minus |
2R | 11396894..11397411 | 1..518 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11384743..11385442 | 2075..2774 | 100 | <- | Minus |
2R | 11385556..11386596 | 1034..2074 | 100 | <- | Minus |
2R | 11386663..11387066 | 630..1033 | 100 | <- | Minus |
2R | 11391071..11391181 | 519..629 | 100 | <- | Minus |
2R | 11396894..11397411 | 1..518 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11384743..11385442 | 2075..2774 | 100 | <- | Minus |
2R | 11385556..11386596 | 1034..2074 | 100 | <- | Minus |
2R | 11386663..11387066 | 630..1033 | 100 | <- | Minus |
2R | 11391071..11391181 | 519..629 | 100 | <- | Minus |
2R | 11396894..11397411 | 1..518 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 7272248..7272947 | 2075..2774 | 100 | <- | Minus |
arm_2R | 7273061..7274101 | 1034..2074 | 100 | <- | Minus |
arm_2R | 7274168..7274571 | 630..1033 | 100 | <- | Minus |
arm_2R | 7278576..7278686 | 519..629 | 100 | <- | Minus |
arm_2R | 7284399..7284916 | 1..518 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 11385942..11386641 | 2075..2774 | 100 | <- | Minus |
2R | 11386755..11387795 | 1034..2074 | 100 | <- | Minus |
2R | 11387862..11388265 | 630..1033 | 100 | <- | Minus |
2R | 11392270..11392380 | 519..629 | 100 | <- | Minus |
2R | 11398093..11398610 | 1..518 | 100 | Minus |
Translation from 551 to 2455
> GH21160.hyp MDTGSVVSEPISAHHRAFAKQKSASMTILNPKGCGSAVKYSLHSTAETNQ ETASTTTTSTHCSTTGRRRKGGSLGGTLSSRSTRSESKELRSALQDREAV IQNLRIQLCLGKLPRPTGPPLDESEKPAAEQKLNRLKTEAENKRIKIKNL KSALEKLDITDNIDIRIRQAELEYALGREELQMLSIVEEARALQARLEKS KPEAQTLYNIISSGVSLSLHAVHATSGRWAVQQRTDQPGFYVEWALEGDG LYKGDRILEINGRLVTGKSKEELQKQVGNSGKCQMVVLRKKSVPIPQKQL DQEKENNMRLQHRISYLEEQVRELQTVKEHHPSQQQQQQQQQQQNPQQNP QQNPQQTSSNQSQHVTSISISSPPSTPPEKPLIFQRGNYITTLVGGKPIE LMGDDMASTQTPPGHVTKTLIKENTHIDLRDRLSHMYSMPSKSLSASKIS INSDSAYMQHHRRDKERHRDRQHRERPRDPLQQQQQLHREHLMSTHARSV EHLNHYNGLDRRRDTPRQSESNTLRARLPSDMRSVKSLDFDSENESKPAT ETRTTRPTPPKKPLRLSLQRAQSLQTVELHPCADIERKRPMKRVHHNNNN NNKGGESPTGEGQTMLIENCSPMHTASLGRHKLI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sprt-PA | 634 | CG30023-PA | 1..634 | 1..634 | 3265 | 100 | Plus |
Translation from 551 to 2455
> GH21160.pep MDTGSVVSEPISAHHRAFAKQKSASMTILNPKGCGSAVKYSLHSTAETNQ ETASTTTTSTHCSTTGRRRKGGSLGGTLSSRSTRSESKELRSALQDREAV IQNLRIQLCLGKLPRPTGPPLDESEKPAAEQKLNRLKTEAENKRIKIKNL KSALEKLDITDNIDIRIRQAELEYALGREELQMLSIVEEARALQARLEKS KPEAQTLYNIISSGVSLSLHAVHATSGRWAVQQRTDQPGFYVEWALEGDG LYKGDRILEINGRLVTGKSKEELQKQVGNSGKCQMVVLRKKSVPIPQKQL DQEKENNMRLQHRISYLEEQVRELQTVKEHHPSQQQQQQQQQQQNPQQNP QQNPQQTSSNQSQHVTSISISSPPSTPPEKPLIFQRGNYITTLVGGKPIE LMGDDMASTQTPPGHVTKTLIKENTHIDLRDRLSHMYSMPSKSLSASKIS INSDSAYMQHHRRDKERHRDRQHRERPRDPLQQQQQLHREHLMSTHARSV EHLNHYNGLDRRRDTPRQSESNTLRARLPSDMRSVKSLDFDSENESKPAT ETRTTRPTPPKKPLRLSLQRAQSLQTVELHPCADIERKRPMKRVHHNNNN NNKGGESPTGEGQTMLIENCSPMHTASLGRHKLI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12395-PA | 657 | GF12395-PA | 1..657 | 1..634 | 2013 | 68.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22649-PA | 660 | GG22649-PA | 1..660 | 1..634 | 2270 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20506-PA | 698 | GH20506-PA | 196..698 | 161..634 | 1682 | 72.8 | Plus |
Dgri\GH11745-PA | 62 | GH11745-PA | 1..62 | 580..634 | 150 | 54.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sprt-PA | 634 | CG30023-PA | 1..634 | 1..634 | 3265 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21050-PA | 859 | GI21050-PA | 247..859 | 27..634 | 2297 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10396-PA | 622 | GL10396-PA | 59..381 | 161..500 | 1275 | 83.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30463-PA | 615 | GA30463-PA | 1..615 | 1..634 | 2565 | 85.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20431-PA | 623 | GM20431-PA | 1..623 | 1..634 | 3243 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25902-PA | 657 | GD25902-PA | 1..657 | 1..634 | 2483 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21974-PA | 673 | GJ21974-PA | 196..673 | 161..634 | 1762 | 77.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21885-PA | 847 | GK21885-PA | 247..847 | 27..634 | 2151 | 77.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13523-PA | 658 | GE13523-PA | 1..658 | 1..634 | 2413 | 73.2 | Plus |