BDGP Sequence Production Resources |
Search the DGRC for GH21176
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 211 |
Well: | 76 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6406-RA |
Protein status: | GH21176.pep: gold |
Preliminary Size: | 2247 |
Sequenced Size: | 2319 |
Gene | Date | Evidence |
---|---|---|
CG6406 | 2001-11-09 | Blastp of sequenced clone |
CG6406 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6406 | 2008-04-29 | Release 5.5 accounting |
CG6406 | 2008-08-15 | Release 5.9 accounting |
CG6406 | 2008-12-18 | 5.12 accounting |
2319 bp (2319 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069171
> GH21176.complete CCCTGGCTTATTTGGGAAAAAATTAAGAGGGAGCAGCAGCGGAGGCTAGT GATAAATTAATTAGCCACTGCTACCACATAACCCAGGGTGCGGAAACCTG AACCCAGCTCTGCGGCATATCCACTACCATTGCTAGCACCCCGGTTGCCA TCCAGATTCTGTTACCAGCTCAGGGTAACGACGATGGCGGAACTGGTGAG GGACTGGCTGGCGGACTACCAGCGCATACGGGGTCAGCCCTCGGAGGCGG AAGCGTTCGTGGTGGAGCACGAAACAGATCCCGAGATCGCCGAAGCCATA TTCACCATCTTCAACGAGCGACAGCGGAACGAAACGCTGGTTCACGACAT CTGCCAGCAGCTACTGGCCTTCTACCGCTCGCCGGAGCAGACGCTGCACA AGTTCCCGCTGCAGTTCATCCCAGTGCTTCTCTACACGTACCTCCACTCG GTGGCCGGCGGCGATAAGAAGGCTGCGCGCGGCGTGGAGACGCTGCTCAT CTGCATTTACAATGGCGAGGTGTCCACCGAAGACGGCGGCCAGAAGGTGG TGGCCTTTCGCATGCCCATCCTGGCCCAGACGTCCGTTTACCACGAGGTA AAGAACCTGCCCATGACGGATCTGCGCCGTTGGGAGGAGAACTGCAACCG GGAGGTGAAGTGGGGTCCACACCAGCGCATCGAATCGATTCATGCCCAGA ACCGAATGCGTATTCTTACTGCTTTGCTGTTCTGCTACAACCAGCAGGTC AGCCAAACGCAGAAGTCTTCGCTACTGCACTTGTGCCGGGTCACATCGCA GTTGGTGAACCAAGGATTCACCACGAAGTCGGGTCATGGCCATCGAATGA GTTATGGATCTGATCCTGCAACCGGAGTACCTTTTCCCAAGCCCTCTTCA CCGCGCATTCCACTGTCCGCCGCCTTCCTGATCGAGCTGGTGCACGCCAT CTATTTCGCCATGTTTAATGGCTTCGGCACGATAGCCATTCAGACACTGG ACGACATCCACAACCGGGCCATCTACGAGATGTACTCGGAAGTGATCCTG GTGACCAGCGCAGTGCGAAATTCGCTGCACGCCAATCCTTCCGGACAGCC CAACGACGGTCCCATGGGCTTGAGTGTGGCCTTAACGCCGTCCACAACAA CGGTGACCACATCGGTGTCCAAGTCTATGATCACGAACGCATCCTTCCGT ACGAAAAAACTGCCCGACGACATACCCATCCAGGTACAGGACCTCACAAT ACAGCAGGCTCCGCAGCAGCTGGCCAGCGTCACTGAGGAGACGGAACCGG GCACCAAGGAATCGCCCTCAACGAAGGAGAGTTCCGGTACGCGCACTTCC ATCATGCGGCCCAGCATGGAGGGCATCAAGGCACAGGCACACAAGGCGCT CATTGCGGGCTTCAAGAAATCTAAGGACAAGGAGAAAGAGAAGGACAAGG AGCCACCGAAGCCACCGCAGCGCAAGTTCGACAAGCACACGCAGCGCAAC TCACTGCTCCAGCTGCAGGCGGAACCCAGCTCGAATTCCAGCGCGGAACA GCCACCCACCGGCGAAGTGTTGCCCCTGCAGACGCTCTCGCTGATCAACG AGAACGGCAGCAACAGTTTCAGCGTGGACAGCGACCTCAACGACGGCGTG CTGGGCGTAAGTGCCAACACATCCCTGCCCCCGCTGAGCAGCACCACCAA CTCGGTGACCAGTAGCGACCTGATCACCAAGAGCTTCGACTCCAGCATTG AACTGGCGCCGATAGGGCACAGCAGCAGCAATGGCGGCAAGTTGGCCGAG CACGGCTTGGCGGAGTAGTGCAATCAATCGTCTCGTTCCAAAGGCGATTA GCCAAATCCAAGTATCAAGTATATAAATTTACAACTACAACTGGGGTGAG TGGGTTTTGTATGAATGCAATAATAGATGTAGGCATTGTGCAGGCATTTT TTTTTTTGTAATACAAGGATAATTCTAGGGCATTTCGTTTGCAATTTTGA TCAAGTTATACCAATATATATAATTTATCATTATTACCAGTTTGTCAATA TATAAAGTAATGTTTCTGGTTAGATGCAATTATAGCCCCTGCATTTTGGT CGGACCCTATATTGTGAATACTTAGAATTATCCAAAGATTTCATGCCGAC ACAATGGCATCATGACCGCGAGATTCACTCACCCTAAATTATGTGTACAT TCGCCACCTACCGCTGTGTATTAGCCGAATAGAACCGTGGCTCGAAATTT GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 13622016..13623410 | 2251..857 | 6975 | 100 | Minus |
chr2R | 21145070 | chr2R | 13623465..13624169 | 857..153 | 3525 | 100 | Minus |
chr2R | 21145070 | chr2R | 13624229..13624383 | 155..1 | 775 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 17734881..17736277 | 2253..857 | 6985 | 100 | Minus |
2R | 25286936 | 2R | 17736332..17737036 | 857..153 | 3525 | 100 | Minus |
2R | 25286936 | 2R | 17737096..17737250 | 155..1 | 775 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 17736080..17737476 | 2253..857 | 6985 | 100 | Minus |
2R | 25260384 | 2R | 17737531..17738235 | 857..153 | 3525 | 100 | Minus |
2R | 25260384 | 2R | 17738295..17738449 | 155..1 | 775 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 13622016..13623409 | 858..2251 | 97 | <- | Minus |
chr2R | 13623465..13624166 | 156..857 | 100 | <- | Minus |
chr2R | 13624229..13624383 | 1..155 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6406-RA | 1..1635 | 184..1818 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6406-RA | 1..1635 | 184..1818 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6406-RB | 1..1635 | 184..1818 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6406-RA | 1..1635 | 184..1818 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6406-RB | 1..1635 | 184..1818 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6406-RA | 15..2265 | 1..2251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6406-RA | 15..2265 | 1..2251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6406-RA | 20..2270 | 1..2251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6406-RA | 15..2265 | 1..2251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6406-RA | 20..2270 | 1..2251 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17734883..17736276 | 858..2251 | 100 | <- | Minus |
2R | 17736332..17737033 | 156..857 | 100 | <- | Minus |
2R | 17737096..17737250 | 1..155 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17734883..17736276 | 858..2251 | 100 | <- | Minus |
2R | 17736332..17737033 | 156..857 | 100 | <- | Minus |
2R | 17737096..17737250 | 1..155 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17734883..17736276 | 858..2251 | 100 | <- | Minus |
2R | 17736332..17737033 | 156..857 | 100 | <- | Minus |
2R | 17737096..17737250 | 1..155 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13622388..13623781 | 858..2251 | 100 | <- | Minus |
arm_2R | 13623837..13624538 | 156..857 | 100 | <- | Minus |
arm_2R | 13624601..13624755 | 1..155 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17736082..17737475 | 858..2251 | 100 | <- | Minus |
2R | 17737531..17738232 | 156..857 | 100 | <- | Minus |
2R | 17738295..17738449 | 1..155 | 100 | Minus |
Translation from 183 to 1817
> GH21176.pep MAELVRDWLADYQRIRGQPSEAEAFVVEHETDPEIAEAIFTIFNERQRNE TLVHDICQQLLAFYRSPEQTLHKFPLQFIPVLLYTYLHSVAGGDKKAARG VETLLICIYNGEVSTEDGGQKVVAFRMPILAQTSVYHEVKNLPMTDLRRW EENCNREVKWGPHQRIESIHAQNRMRILTALLFCYNQQVSQTQKSSLLHL CRVTSQLVNQGFTTKSGHGHRMSYGSDPATGVPFPKPSSPRIPLSAAFLI ELVHAIYFAMFNGFGTIAIQTLDDIHNRAIYEMYSEVILVTSAVRNSLHA NPSGQPNDGPMGLSVALTPSTTTVTTSVSKSMITNASFRTKKLPDDIPIQ VQDLTIQQAPQQLASVTEETEPGTKESPSTKESSGTRTSIMRPSMEGIKA QAHKALIAGFKKSKDKEKEKDKEPPKPPQRKFDKHTQRNSLLQLQAEPSS NSSAEQPPTGEVLPLQTLSLINENGSNSFSVDSDLNDGVLGVSANTSLPP LSSTTNSVTSSDLITKSFDSSIELAPIGHSSSNGGKLAEHGLAE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13230-PA | 555 | GF13230-PA | 1..555 | 1..544 | 2519 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21025-PA | 544 | GG21025-PA | 1..544 | 1..544 | 2883 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20398-PA | 559 | GH20398-PA | 1..558 | 1..542 | 2303 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6406-PA | 544 | CG6406-PA | 1..544 | 1..544 | 2791 | 100 | Plus |
CG6406-PB | 544 | CG6406-PB | 1..544 | 1..544 | 2791 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19584-PA | 556 | GI19584-PA | 1..555 | 1..542 | 2276 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17281-PA | 514 | GL17281-PA | 1..514 | 1..544 | 2381 | 81.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19568-PA | 543 | GA19568-PA | 1..543 | 1..544 | 2536 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19955-PA | 544 | GM19955-PA | 1..544 | 1..544 | 2896 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25446-PA | 544 | GD25446-PA | 1..544 | 1..544 | 2904 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18314-PA | 560 | GJ18314-PA | 1..559 | 1..542 | 2294 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22951-PA | 561 | GK22951-PA | 1..557 | 1..541 | 2244 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13968-PA | 545 | GE13968-PA | 1..545 | 1..544 | 2842 | 97.1 | Plus |
Translation from 183 to 1817
> GH21176.hyp MAELVRDWLADYQRIRGQPSEAEAFVVEHETDPEIAEAIFTIFNERQRNE TLVHDICQQLLAFYRSPEQTLHKFPLQFIPVLLYTYLHSVAGGDKKAARG VETLLICIYNGEVSTEDGGQKVVAFRMPILAQTSVYHEVKNLPMTDLRRW EENCNREVKWGPHQRIESIHAQNRMRILTALLFCYNQQVSQTQKSSLLHL CRVTSQLVNQGFTTKSGHGHRMSYGSDPATGVPFPKPSSPRIPLSAAFLI ELVHAIYFAMFNGFGTIAIQTLDDIHNRAIYEMYSEVILVTSAVRNSLHA NPSGQPNDGPMGLSVALTPSTTTVTTSVSKSMITNASFRTKKLPDDIPIQ VQDLTIQQAPQQLASVTEETEPGTKESPSTKESSGTRTSIMRPSMEGIKA QAHKALIAGFKKSKDKEKEKDKEPPKPPQRKFDKHTQRNSLLQLQAEPSS NSSAEQPPTGEVLPLQTLSLINENGSNSFSVDSDLNDGVLGVSANTSLPP LSSTTNSVTSSDLITKSFDSSIELAPIGHSSSNGGKLAEHGLAE*