BDGP Sequence Production Resources |
Search the DGRC for GH21395
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 213 |
Well: | 95 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1161-RA |
Protein status: | GH21395.pep: gold |
Preliminary Size: | 1108 |
Sequenced Size: | 939 |
Gene | Date | Evidence |
---|---|---|
CG1161-RA | 2009-01-21 | est gleaning |
CG1161 | 2011-05-12 | Manual selection by Charles Yu |
939 bp assembled on 2011-09-22
GenBank Submission: BT132641.1
> GH21395.complete CGAAATTGCAAGGGAATTTTCTCCAATAAAAGGCAAGAAAACTGAGGAAA ATTGAAATTAAAGAAAAATTAATGGCACACAAGCGCCTGTTCGTCTACGC GGTGCTACTGGTGATATGTTATTTGGTTGGCGTGACATGGGCTGAGACTG CGGCGCAGACATTCCCAGCGATCGGCACCAACAGCAACAACAACAGCAAT GCTCAACCTGCTCCTGTGCCTGCACCTGCAGCTCCAGCGGCTGCAGCTCC ACTAGCCAAGCAAGTTTCAGCTCCCACTGCCGCCCCTCCGGCCAAGGTCA TCGGCCAGCCTGTGCTCGCTGCTCCAGGCAAAAATTCTTCCAATTCCAGC AGCACAACTGAGTGCGTCTGTGCCGGTGCCCTGCTGCCCCGTTTGGATGC CAATGGCAAGGAGCTGCCCATATGCGCCGAGTGCAAGTGCTCCCATGTGG CGAGAAATACGACGCTGATAAAGGTCGTGGTCATTATTGTGATTTGGATC ATCTCCATTTTAGTAATATACATGCTCTTCCTGATGTGCCTGGACCCGTT GCTGAACAAGCGAGTGAAGGCGAACTACCAGGAGCACACCAACGAAGATG ATGAACCAACGCCGCCCCTGCCAGCCGTCAACAACCAGGAGCTCAGTGCC AGAGCCAATGTCCTCAATCGTGTGGGCCACCAGCAGGACAAGTGGAAGCG GCAGGTGCGCGAGCAGAGACGCCACATCTACGACAGGCATACCATGCTAA ACTAACAAGGGGTTCGGTTTGCAGCTGGCGGAGATTAGGAGGCGCATGGG CGACTTAAGACACGTATTCCAAGCAGTTATCCTTTGCGAAATTCCCCTTT GGATCAAATTGATTATCTGTATATTTAGCCAGATTTTATGTTAATTAAAA TAAACCAAAATATGTTTGTCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1182088..1182408 | 600..920 | 1605 | 100 | Plus |
chr3R | 27901430 | chr3R | 1180989..1181213 | 140..364 | 1125 | 100 | Plus |
chr3R | 27901430 | chr3R | 1180777..1180917 | 1..141 | 705 | 100 | Plus |
chr3R | 27901430 | chr3R | 1181664..1181792 | 472..600 | 645 | 100 | Plus |
chr3R | 27901430 | chr3R | 1181496..1181607 | 364..475 | 560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5356425..5356746 | 600..921 | 1610 | 100 | Plus |
3R | 32079331 | 3R | 5355326..5355550 | 140..364 | 1125 | 100 | Plus |
3R | 32079331 | 3R | 5355114..5355254 | 1..141 | 705 | 100 | Plus |
3R | 32079331 | 3R | 5356001..5356129 | 472..600 | 645 | 100 | Plus |
3R | 32079331 | 3R | 5355833..5355944 | 364..475 | 560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5097256..5097577 | 600..921 | 1610 | 100 | Plus |
3R | 31820162 | 3R | 5096157..5096381 | 140..364 | 1125 | 100 | Plus |
3R | 31820162 | 3R | 5095945..5096085 | 1..141 | 705 | 100 | Plus |
3R | 31820162 | 3R | 5096832..5096960 | 472..600 | 645 | 100 | Plus |
3R | 31820162 | 3R | 5096664..5096775 | 364..475 | 560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6851 | 171..283 | 152 | 61.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2301..2393 | 170..263 | 143 | 64.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2452..2571 | 171..279 | 142 | 64.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2323..2424 | 171..277 | 136 | 61.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2783..2871 | 152..247 | 129 | 65.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6756..6875 | 171..292 | 128 | 57.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1526..1589 | 135..199 | 124 | 67.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6872 | 171..271 | 124 | 61.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6792 | 177..251 | 118 | 64 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2502 | 176..305 | 114 | 60 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2394..2467 | 176..251 | 114 | 63.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6796..6900 | 147..251 | 111 | 60.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1181666..1181791 | 474..599 | 100 | -> | Plus |
chr3R | 1180777..1180916 | 1..140 | 100 | -> | Plus |
chr3R | 1180990..1181213 | 141..364 | 100 | -> | Plus |
chr3R | 1181497..1181605 | 365..473 | 100 | -> | Plus |
chr3R | 1182088..1182408 | 600..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1161-RA | 1..684 | 72..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1161-RA | 1..684 | 72..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1161-RA | 1..684 | 72..755 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1161-RA | 15..934 | 1..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1161-RA | 23..942 | 1..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1161-RA | 23..942 | 1..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5356003..5356128 | 474..599 | 100 | -> | Plus |
3R | 5355114..5355253 | 1..140 | 100 | -> | Plus |
3R | 5355327..5355550 | 141..364 | 100 | -> | Plus |
3R | 5355834..5355942 | 365..473 | 100 | -> | Plus |
3R | 5356425..5356745 | 600..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5356003..5356128 | 474..599 | 100 | -> | Plus |
3R | 5355114..5355253 | 1..140 | 100 | -> | Plus |
3R | 5355327..5355550 | 141..364 | 100 | -> | Plus |
3R | 5355834..5355942 | 365..473 | 100 | -> | Plus |
3R | 5356425..5356745 | 600..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5356003..5356128 | 474..599 | 100 | -> | Plus |
3R | 5355114..5355253 | 1..140 | 100 | -> | Plus |
3R | 5355327..5355550 | 141..364 | 100 | -> | Plus |
3R | 5355834..5355942 | 365..473 | 100 | -> | Plus |
3R | 5356425..5356745 | 600..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1180836..1180975 | 1..140 | 100 | -> | Plus |
arm_3R | 1181049..1181272 | 141..364 | 100 | -> | Plus |
arm_3R | 1181556..1181664 | 365..473 | 100 | -> | Plus |
arm_3R | 1181725..1181850 | 474..599 | 100 | -> | Plus |
arm_3R | 1182147..1182467 | 600..920 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5096665..5096773 | 365..473 | 100 | -> | Plus |
3R | 5096834..5096959 | 474..599 | 100 | -> | Plus |
3R | 5096158..5096381 | 141..364 | 100 | -> | Plus |
3R | 5097256..5097576 | 600..920 | 100 | Plus | |
3R | 5095945..5096084 | 1..140 | 100 | -> | Plus |
Translation from 71 to 754
> GH21395.hyp MAHKRLFVYAVLLVICYLVGVTWAETAAQTFPAIGTNSNNNSNAQPAPVP APAAPAAAAPLAKQVSAPTAAPPAKVIGQPVLAAPGKNSSNSSSTTECVC AGALLPRLDANGKELPICAECKCSHVARNTTLIKVVVIIVIWIISILVIY MLFLMCLDPLLNKRVKANYQEHTNEDDEPTPPLPAVNNQELSARANVLNR VGHQQDKWKRQVREQRRHIYDRHTMLN*
Translation from 71 to 754
> GH21395.pep MAHKRLFVYAVLLVICYLVGVTWAETAAQTFPAIGTNSNNNSNAQPAPVP APAAPAAAAPLAKQVSAPTAAPPAKVIGQPVLAAPGKNSSNSSSTTECVC AGALLPRLDANGKELPICAECKCSHVARNTTLIKVVVIIVIWIISILVIY MLFLMCLDPLLNKRVKANYQEHTNEDDEPTPPLPAVNNQELSARANVLNR VGHQQDKWKRQVREQRRHIYDRHTMLN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20761-PA | 254 | GF20761-PA | 1..254 | 1..227 | 743 | 66.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12738-PA | 259 | GG12738-PA | 1..259 | 1..227 | 866 | 77.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17779-PA | 222 | GH17779-PA | 1..222 | 1..227 | 705 | 75.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1161-PA | 227 | CG1161-PA | 1..227 | 1..227 | 1183 | 100 | Plus |
CG1161-PC | 221 | CG1161-PC | 1..176 | 1..176 | 907 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22547-PA | 216 | GI22547-PA | 1..216 | 1..227 | 668 | 72.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21638-PA | 240 | GL21638-PA | 1..240 | 1..227 | 736 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11097-PA | 240 | GA11097-PA | 1..240 | 1..227 | 736 | 74.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10801-PA | 277 | GM10801-PA | 1..277 | 1..227 | 794 | 74.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19778-PA | 263 | GD19778-PA | 1..263 | 1..227 | 829 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11105-PA | 213 | GJ11105-PA | 1..213 | 1..227 | 665 | 70.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12969-PA | 227 | GK12969-PA | 1..227 | 1..227 | 682 | 70.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25460-PA | 266 | GE25460-PA | 1..266 | 1..227 | 821 | 73.7 | Plus |