Clone GH21533 Report

Search the DGRC for GH21533

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:215
Well:33
Vector:pOT2
Associated Gene/TranscriptCG2145-RA
Protein status:GH21533.pep: gold
Sequenced Size:1986

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2145 2007-09-25 DGC5 pick
CG2145 2008-04-29 Release 5.5 accounting
CG2145 2008-04-29 Picked prior to 5.5
CG2145 2008-08-15 Release 5.9 accounting
CG2145 2008-12-18 5.12 accounting

Clone Sequence Records

GH21533.complete Sequence

1986 bp assembled on 2007-12-05

GenBank Submission: BT031314

> GH21533.complete
TCTTCGTTCAGCTGGTCGAGCAGTCTTCGAATTTTGAAAAAAGCCGAAAT
TGAAATAAAAAAATTGTTGTACGCCAAGGCAAGTGCTAATAAATCGAGCA
AAATGCGCTGCCTGGCATTGAGCGCAGTGTTTTTGTGCCTGACTCTGGCC
GGGCACTTTCATTTGTCAGATGCCTACAAGAACGAGGTACAGATCACCCC
GGATCCGCTAGACGCGGTGGAGACGACAACCAAGAAGTCCAGCTGGTTTG
GTGGATTCAAGAAGTTCTTTGGCAGCGATGGCACTACAACTACCACCAGC
ACGATTGCTCCACCGGTGGTCACCAGTCCGAAATCGGTGGTGGTTACACC
CACGGCAGCCAACAAGCCACCGCCACTGGTCATCTCGCATGCTCCATTGA
TGCCGCTGGGACCGCGACCCGATACGCCGGGATCGTCACCTTTCGGCGCA
TCCCAAAATCCTCAAACGCCACCTCAGTGGCCATCGAGCACCAGAGCAAC
GCCATCGCATCCATCGCAACCCTCGCAGCCATCTCAGCAGCCACCTCTGC
CTGGTTTCGCCTCCTATCGGCCACAGAAACCGCAGCCGAATAGCTACGAT
CTTAGCTACGGTGGCGGTCCACAACCGGCACCAGCAGGAACAGGACGTCC
TGGTTTTGGACTGGGCATAAGCAGCACTACGAGCACCACGACCACCGCGA
AGCCCATCACCAGCACCACAGGTAAGACACCGCAGCAGAAGGAGGATTTC
CCGGCACTGCCAGGACCTCGGCGGCCGTCCCAAAAAGAGGACTTCCCAGC
TCTGCCCGCGCCCAAAACTCCACCAGGCTCGCCAACGCCTACACCGGGAT
CTCCTTCGGCTTGGCAATCACCGTTGCCAACGCCCCAGCATCCTGTGCAT
CCGCCCACTAAGGCTACTTCGGCGGCCACGCCTACCCCGACACCAACGCC
TTCGTTCTCTTCCTCGGTAACGCCCACTCCCGCTCACGGATCGTCTGTGG
GACCACACAAGGACGGAGGTGGAGGTGGTGGAGGCGGCACAACTACTGTG
CGACCCGGTTTCCAGTCGTCGGGCAACTCGGTGGCCACTGATGACGAAAT
CCGCCAGCTGACGGAGCTACTGTACACCAAGGAGAGCAACAGCCAGATCG
GTAACATCCAAGTGAATCTGCAGGGACGCACGCGTTCCATCGACAGCGCA
GATGAGGCACCCAATCCACTTTTGACTGTGGACTCGAAAGCCCTTGAATC
CCCGACGATCGTCAAGATGCGGCTGCTGTTCAACAACTACGAGCACGACA
CCCATGTCAACGAGCATGTGACGCCCAACGAGCGCAAGGAGGAGAATGAC
TTTCTGGACGCAGTGATGGCCACGCCGGTGATGCGACAGGCCATGCTCTT
CCTCCAACAAAAGGGAGTCGTCAGTCCCGATCCAAAGACCCACCGCGATC
TGGTCAAGGAGCTGTGGTTCACACAGTACTCGCGCGGTCAGGGCAAGATC
GGCAGTTCCGGCTTCGAGCACGTCTTTGTCTACGAGGTGAAGGACGGCAC
CATTATCGGATTCCACAACTGGGTCTATATTGGCGATGAGGAAAAGGACG
GTCGCTTTGACTACAAGGGATATATGAAGGAGCAGGACATTGGCACGAAG
GGAAAAATCGTAAAGATCCGTTTCTCGCATCAGGGACTCAATAAGCCAGT
GAATACTGTGTTTGTGGGCACCTCTCCGGAACTGGAGCTCGCCCTGTACA
CCGTCTGCTTCCAGCTACGACCGGATCGCACCTGTCCAGTGTCCTTGGGC
AATAGCAAGTTCGGCATTGTCACCTATTCGTGGCGCTACCGGGGAAAGAA
CCTCATTGGCAGCGCCTATCCGGAGATTTGAGGCAGCGATTAACGTTTGT
GCCTCTCGTAGTCATCGTAGAATTTTTTTTCTGTCGCTTTAATGAATAAA
GTTAATGTGTGAAAGTATAAAAAAAAAAAAAAAAAA

GH21533.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:33:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG2145-RA 2085 CG2145-RA 89..2059 1..1970 9800 99.8 Plus
CG3303-RA 1609 CG3303-RA 952..1003 1711..1762 155 86.5 Plus
CG3303-RA 1609 CG3303-RA 695..764 1457..1526 140 80 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:44:16
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 10819011..10820060 168..1217 5235 99.9 Plus
chrX 22417052 chrX 10820138..10820567 1218..1647 2150 100 Plus
chrX 22417052 chrX 10820692..10821013 1647..1968 1595 99.7 Plus
chrX 22417052 chrX 10818776..10818945 1..169 785 98.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:02:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:44:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10927710..10928759 168..1217 5250 100 Plus
X 23542271 X 10928837..10929266 1218..1647 2150 100 Plus
X 23542271 X 10929391..10929714 1647..1970 1605 99.7 Plus
X 23542271 X 10927475..10927644 1..169 800 99.4 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:29:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 10935808..10936857 168..1217 5250 100 Plus
X 23527363 X 10936935..10937364 1218..1647 2150 100 Plus
X 23527363 X 10937489..10937812 1647..1970 1605 99.6 Plus
X 23527363 X 10935573..10935742 1..169 810 99.4 Plus
3R 31820162 3R 15650541..15650592 1711..1762 155 86.5 Plus
3R 31820162 3R 15650221..15650290 1457..1526 140 80 Plus
Blast to na_te.dros performed on 2019-03-16 16:44:14 has no hits.

GH21533.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:45:13 Download gff for GH21533.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 10818776..10818945 1..169 98 -> Plus
chrX 10819013..10820060 170..1217 99 -> Plus
chrX 10820138..10820567 1218..1647 100 -> Plus
chrX 10820693..10821013 1648..1968 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:51:37 Download gff for GH21533.complete
Subject Subject Range Query Range Percent Splice Strand
CG2145-RA 1..1779 103..1881 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:02:06 Download gff for GH21533.complete
Subject Subject Range Query Range Percent Splice Strand
CG2145-RA 1..1779 103..1881 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:43:10 Download gff for GH21533.complete
Subject Subject Range Query Range Percent Splice Strand
CG2145-RA 1..1779 103..1881 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:47:28 Download gff for GH21533.complete
Subject Subject Range Query Range Percent Splice Strand
CG2145-RA 1..1779 103..1881 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:39:28 Download gff for GH21533.complete
Subject Subject Range Query Range Percent Splice Strand
CG2145-RA 1..1779 103..1881 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:47:34 Download gff for GH21533.complete
Subject Subject Range Query Range Percent Splice Strand
CG2145-RA 77..2045 1..1968 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:02:06 Download gff for GH21533.complete
Subject Subject Range Query Range Percent Splice Strand
CG2145-RA 77..2045 1..1968 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:43:10 Download gff for GH21533.complete
Subject Subject Range Query Range Percent Splice Strand
CG2145-RA 77..2045 1..1968 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:47:29 Download gff for GH21533.complete
Subject Subject Range Query Range Percent Splice Strand
CG2145-RA 77..2045 1..1968 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:39:28 Download gff for GH21533.complete
Subject Subject Range Query Range Percent Splice Strand
CG2145-RA 77..2045 1..1968 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:45:13 Download gff for GH21533.complete
Subject Subject Range Query Range Percent Splice Strand
X 10927475..10927644 1..169 99 -> Plus
X 10927712..10928759 170..1217 100 -> Plus
X 10928837..10929266 1218..1647 100 -> Plus
X 10929392..10929712 1648..1968 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:45:13 Download gff for GH21533.complete
Subject Subject Range Query Range Percent Splice Strand
X 10927475..10927644 1..169 99 -> Plus
X 10927712..10928759 170..1217 100 -> Plus
X 10928837..10929266 1218..1647 100 -> Plus
X 10929392..10929712 1648..1968 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:45:13 Download gff for GH21533.complete
Subject Subject Range Query Range Percent Splice Strand
X 10927475..10927644 1..169 99 -> Plus
X 10927712..10928759 170..1217 100 -> Plus
X 10928837..10929266 1218..1647 100 -> Plus
X 10929392..10929712 1648..1968 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:43:10 Download gff for GH21533.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10821508..10821677 1..169 99 -> Plus
arm_X 10821745..10822792 170..1217 100 -> Plus
arm_X 10822870..10823299 1218..1647 100 -> Plus
arm_X 10823425..10823745 1648..1968 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:54:03 Download gff for GH21533.complete
Subject Subject Range Query Range Percent Splice Strand
X 10935810..10936857 170..1217 100 -> Plus
X 10936935..10937364 1218..1647 100 -> Plus
X 10937490..10937810 1648..1968 99   Plus
X 10935573..10935742 1..169 99 -> Plus

GH21533.pep Sequence

Translation from 102 to 1880

> GH21533.pep
MRCLALSAVFLCLTLAGHFHLSDAYKNEVQITPDPLDAVETTTKKSSWFG
GFKKFFGSDGTTTTTSTIAPPVVTSPKSVVVTPTAANKPPPLVISHAPLM
PLGPRPDTPGSSPFGASQNPQTPPQWPSSTRATPSHPSQPSQPSQQPPLP
GFASYRPQKPQPNSYDLSYGGGPQPAPAGTGRPGFGLGISSTTSTTTTAK
PITSTTGKTPQQKEDFPALPGPRRPSQKEDFPALPAPKTPPGSPTPTPGS
PSAWQSPLPTPQHPVHPPTKATSAATPTPTPTPSFSSSVTPTPAHGSSVG
PHKDGGGGGGGGTTTVRPGFQSSGNSVATDDEIRQLTELLYTKESNSQIG
NIQVNLQGRTRSIDSADEAPNPLLTVDSKALESPTIVKMRLLFNNYEHDT
HVNEHVTPNERKEENDFLDAVMATPVMRQAMLFLQQKGVVSPDPKTHRDL
VKELWFTQYSRGQGKIGSSGFEHVFVYEVKDGTIIGFHNWVYIGDEEKDG
RFDYKGYMKEQDIGTKGKIVKIRFSHQGLNKPVNTVFVGTSPELELALYT
VCFQLRPDRTCPVSLGNSKFGIVTYSWRYRGKNLIGSAYPEI*

GH21533.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:06:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20477-PA 592 GF20477-PA 1..592 1..592 2127 75.6 Plus
Dana\GF18549-PA 323 GF18549-PA 56..321 331..591 577 43.4 Plus
Dana\GF16037-PA 152 GF16037-PA 12..143 331..459 208 39.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:06:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18381-PA 592 GG18381-PA 1..592 1..592 2496 93.3 Plus
Dere\GG16962-PA 322 GG16962-PA 55..321 331..592 565 42.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:06:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12680-PA 676 GH12680-PA 205..676 150..592 1509 65.7 Plus
Dgri\GH23462-PA 324 GH23462-PA 55..321 331..592 594 41.6 Plus
Dgri\GH12680-PA 676 GH12680-PA 1..125 1..126 292 57.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:22:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG2145-PB 592 CG2145-PB 1..592 1..592 3177 100 Plus
CG2145-PA 592 CG2145-PA 1..592 1..592 3177 100 Plus
EndoU-PA 322 CG3303-PA 53..320 329..591 561 42.8 Plus
CG34220-PA 726 CG34220-PA 339..556 61..292 220 28.8 Plus
CG15021-PA 420 CG15021-PA 179..403 70..313 191 30.7 Plus
RpII215-PA 1887 CG1554-PA 1481..1866 43..409 188 25.1 Plus
CG34220-PA 726 CG34220-PA 170..398 61..293 187 26.1 Plus
CG15021-PA 420 CG15021-PA 73..288 67..292 172 28.6 Plus
CG15021-PA 420 CG15021-PA 58..260 103..293 171 29.2 Plus
Muc55B-PB 485 CG5765-PB 204..437 58..301 169 28.4 Plus
Muc55B-PA 485 CG5765-PA 204..437 58..301 169 28.4 Plus
CG13731-PB 792 CG13731-PB 188..453 61..301 169 26.6 Plus
Muc91C-PB 949 CG7709-PB 152..413 69..306 168 28 Plus
Muc91C-PA 950 CG7709-PA 153..414 69..306 168 28 Plus
CG15021-PA 420 CG15021-PA 37..249 98..305 166 27.9 Plus
Muc11A-PB 1552 CG32656-PB 268..542 34..328 163 27.5 Plus
osa-PE 2555 CG7467-PE 261..501 83..319 162 27.8 Plus
osa-PC 2556 CG7467-PC 261..501 83..319 162 27.8 Plus
osa-PF 2559 CG7467-PF 261..501 83..319 162 27.8 Plus
osa-PA 2703 CG7467-PA 261..501 83..319 162 27.8 Plus
osa-PB 2716 CG7467-PB 261..501 83..319 162 27.8 Plus
osa-PD 2716 CG7467-PD 261..501 83..319 162 27.8 Plus
CG13731-PB 792 CG13731-PB 359..556 61..301 161 28 Plus
Muc91C-PB 949 CG7709-PB 187..450 56..323 161 26.1 Plus
Muc91C-PA 950 CG7709-PA 188..451 56..323 161 26.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:06:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16258-PA 637 GI16258-PA 1..637 1..592 1780 62.3 Plus
Dmoj\GI22951-PA 327 GI22951-PA 60..326 331..592 559 41.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:06:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18244-PA 549 GL18244-PA 1..549 1..592 1917 66.8 Plus
Dper\GL22078-PA 325 GL22078-PA 57..322 331..591 576 42.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:06:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15266-PA 615 GA15266-PA 1..615 1..592 2006 68.7 Plus
Dpse\GA27370-PA 325 GA27370-PA 57..322 331..591 576 42.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:06:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11444-PA 588 GM11444-PA 1..588 1..592 2992 97.5 Plus
Dsec\GM24268-PA 322 GM24268-PA 55..320 331..591 586 43.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:06:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16994-PA 589 GD16994-PA 1..589 1..592 3021 97.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:06:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16723-PA 618 GJ16723-PA 1..618 1..592 1840 62.6 Plus
Dvir\GJ23767-PA 324 GJ23767-PA 57..323 331..592 569 42.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:06:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19979-PA 612 GK19979-PA 1..612 1..592 2006 68.6 Plus
Dwil\GK11216-PA 322 GK11216-PA 54..320 331..592 612 44 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:06:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15899-PA 612 GE15899-PA 1..562 1..569 2394 92.4 Plus
Dyak\GE24349-PA 322 GE24349-PA 55..320 331..591 505 39.7 Plus

GH21533.hyp Sequence

Translation from 102 to 1880

> GH21533.hyp
MRCLALSAVFLCLTLAGHFHLSDAYKNEVQITPDPLDAVETTTKKSSWFG
GFKKFFGSDGTTTTTSTIAPPVVTSPKSVVVTPTAANKPPPLVISHAPLM
PLGPRPDTPGSSPFGASQNPQTPPQWPSSTRATPSHPSQPSQPSQQPPLP
GFASYRPQKPQPNSYDLSYGGGPQPAPAGTGRPGFGLGISSTTSTTTTAK
PITSTTGKTPQQKEDFPALPGPRRPSQKEDFPALPAPKTPPGSPTPTPGS
PSAWQSPLPTPQHPVHPPTKATSAATPTPTPTPSFSSSVTPTPAHGSSVG
PHKDGGGGGGGGTTTVRPGFQSSGNSVATDDEIRQLTELLYTKESNSQIG
NIQVNLQGRTRSIDSADEAPNPLLTVDSKALESPTIVKMRLLFNNYEHDT
HVNEHVTPNERKEENDFLDAVMATPVMRQAMLFLQQKGVVSPDPKTHRDL
VKELWFTQYSRGQGKIGSSGFEHVFVYEVKDGTIIGFHNWVYIGDEEKDG
RFDYKGYMKEQDIGTKGKIVKIRFSHQGLNKPVNTVFVGTSPELELALYT
VCFQLRPDRTCPVSLGNSKFGIVTYSWRYRGKNLIGSAYPEI*

GH21533.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:38:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG2145-PB 592 CG2145-PB 1..592 1..592 3177 100 Plus
CG2145-PA 592 CG2145-PA 1..592 1..592 3177 100 Plus
CG3303-PA 322 CG3303-PA 53..320 329..591 561 42.8 Plus
CG34220-PA 726 CG34220-PA 339..556 61..292 220 28.8 Plus
CG15021-PA 420 CG15021-PA 179..403 70..313 191 30.7 Plus
CG34220-PA 726 CG34220-PA 170..398 61..293 187 26.1 Plus