BDGP Sequence Production Resources |
Search the DGRC for GH21853
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 218 |
Well: | 53 |
Vector: | pOT2 |
Associated Gene/Transcript | Bsg-RG |
Protein status: | GH21853.pep: validated full length |
Preliminary Size: | 1666 |
Sequenced Size: | 1512 |
Gene | Date | Evidence |
---|---|---|
CG31605 | 2001-07-04 | Blastp of sequenced clone |
Bsg | 2008-04-29 | Release 5.5 accounting |
Bsg | 2008-08-15 | Release 5.9 accounting |
Bsg | 2008-12-18 | 5.12 accounting |
1512 bp (1512 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051571
> GH21853.complete CTTTACACGAGCGTGGCTGGAGCAGCAGCAACAACAACAACAGTTGCCCC ACCAGTCGCACAAGCTGCACAAGTCGCATTTGGGCTACGGAAATGCCAGC CTGTCCGGGTCTCAGCCCTGGCATCCGTCAGCCGGCGGTGGCGGTATCCA CCGCGTTTACTCGGCCACACCGCCCGATTTTCCACCTCCGCGCCTTAATC TGCTGGAGCAGACGGTGGCGCCGCCAGAGCCACCGACCATACTGTACAAT CCCAATCCGACGCATCCCACTGCCAGCGCCACTGCCACGGAGACCAGCGT GCTCCTGACGACGGCGCACCACCATGCCCACCATCAGCAGCAGCTGCAGC AGCAGTCGCAACACACGCTGAACGCCTTCCAGCTGCCACTGCCGCCGCGA CCCAATCCCGGCCAGAATGAGCGATACCAGACCTATGCACCGCACTATGT GCCACCAGTGGTGGTATCGGGAGCGGGCGCGGGCGCAGGCGCGGACCCGG GAGCAGGAGCATCAGGAGAGCAGACCACCATTTCAGCAGCCACCAGCACA AGGGCCATGATGGGTGGCGGTGGTGGCGTTGCTGGTGCGGGCTTTTCCGC GGGCGCCAGTGGCCCAATGCTGGGTGCTGGCGGTCACATGCTGATGGGTG GCCAGGGGCATCAGGTGCATCTGCAGCACCAGACGCTCTTGCCCGTCAAG ATGGATAAGCTGGTGCCAAACTATGATAATGCCGAGCATCAAATGAAATT TTACGACATCAGATCGCCGCTCGTTCTCAGCTGCAACGTGAAAGACGGTA CGCCGGGCGGCGTGCTCATATGGAAAAAGAACGGCACCGCTGTGACGGAT GTACCTTCTCTCAGAGGTCGCTTTAAGTTAATCGCAGACGAGAACAAGTT CATCATCGATAAGACGGATACGAACGACGATGGCAAATACAGTTGCGAGT TTGACGGCGTGTCCAAGGAAATCGAAGTAATTGCCCGCGTTGTTGTACGA GTGCCTTCAAATACAGCCGTTGTGGAGGGTGAAAAGATGTCGGTGACCTG CAGCGTTGTGGGTACCAAACCAGAGTTGACATGGACCTTTGCCAATGTAA CGCTGACAAATGCCACAGATCGCTTCATTCTCAAACCAGACGATAATGGT GTTCCTAACGCCATTCTGACACTGGATAATGTGACATTGGACGACAGAGG CGAATACAAATGCATTGGACGAAATGCGGCCAATGTCTACGGTGGGAACA CCACCACTCCTGCCAGCGACGTCACAACTGTGCGTGTTAAGGGCAAATTT GCCGCCTTGTGGCCTTTCCTGGGCATCTGTGCTGAGGTGCTGATTCTGTG CATCATCATTCTCATTTATGAGAAGCGACGCAACAAGAGCGAACTGGAGG AGAGTGATACTGATCCCCAAGAACAGAAAAAGAAAAGGAGAAATTATGAT TAAAATTCCTAAGTAAAAGAAAGAACACACCGTATAAAAAAAAAAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 8101834..8102537 | 1..704 | 3505 | 99.9 | Plus |
chr2L | 23010047 | chr2L | 8106270..8106481 | 1091..1302 | 1015 | 98.6 | Plus |
chr2L | 23010047 | chr2L | 8105872..8106033 | 822..983 | 810 | 100 | Plus |
chr2L | 23010047 | chr2L | 8106780..8106914 | 1292..1426 | 675 | 100 | Plus |
chr2L | 23010047 | chr2L | 8104725..8104844 | 704..823 | 600 | 100 | Plus |
chr2L | 23010047 | chr2L | 8106098..8106206 | 983..1091 | 545 | 100 | Plus |
chr2L | 23010047 | chr2L | 8109514..8109573 | 1426..1485 | 300 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8102800..8103503 | 1..704 | 3520 | 100 | Plus |
2L | 23513712 | 2L | 8107237..8107448 | 1091..1302 | 1030 | 99.1 | Plus |
2L | 23513712 | 2L | 8106839..8107000 | 822..983 | 810 | 100 | Plus |
2L | 23513712 | 2L | 8107747..8107881 | 1292..1426 | 675 | 100 | Plus |
2L | 23513712 | 2L | 8105691..8105810 | 704..823 | 600 | 100 | Plus |
2L | 23513712 | 2L | 8107065..8107173 | 983..1091 | 545 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 8102800..8103503 | 1..704 | 3520 | 100 | Plus |
2L | 23513712 | 2L | 8107237..8107448 | 1091..1302 | 1030 | 99 | Plus |
2L | 23513712 | 2L | 8106839..8107000 | 822..983 | 810 | 100 | Plus |
2L | 23513712 | 2L | 8107747..8107881 | 1292..1426 | 675 | 100 | Plus |
2L | 23513712 | 2L | 8105691..8105810 | 704..823 | 600 | 100 | Plus |
2L | 23513712 | 2L | 8107065..8107173 | 983..1091 | 545 | 100 | Plus |
2L | 23513712 | 2L | 8110481..8110553 | 1426..1498 | 335 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6830..6883 | 20..73 | 153 | 75.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6830 | 21..73 | 141 | 75.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..6783 | 21..69 | 137 | 75.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6756..6804 | 21..69 | 137 | 75.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6793..6858 | 5..69 | 129 | 68.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2454..2510 | 17..73 | 123 | 68.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1558..1602 | 21..63 | 121 | 77.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2377 | 17..69 | 121 | 69.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2806..2854 | 21..69 | 119 | 71.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1539..1585 | 23..69 | 118 | 72.3 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 3621..3677 | 1419..1477 | 118 | 71.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 8106271..8106471 | 1092..1292 | 99 | -> | Plus |
chr2L | 8106781..8106913 | 1293..1425 | 100 | -> | Plus |
chr2L | 8109514..8109573 | 1426..1485 | 100 | Plus | |
chr2L | 8101834..8102537 | 1..704 | 99 | -> | Plus |
chr2L | 8104726..8104843 | 705..822 | 100 | -> | Plus |
chr2L | 8105873..8106033 | 823..983 | 100 | -> | Plus |
chr2L | 8106099..8106206 | 984..1091 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg-RG | 495..1947 | 1..1453 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg-RG | 495..1947 | 1..1453 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg-RG | 495..1947 | 1..1453 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg-RG | 495..1947 | 1..1453 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg-RG | 495..1947 | 1..1453 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg-RG | 913..2397 | 1..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg-RG | 913..2397 | 1..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg-RG | 978..2462 | 1..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg-RG | 913..2397 | 1..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bsg-RG | 978..2462 | 1..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8102800..8103503 | 1..704 | 100 | -> | Plus |
2L | 8105692..8105809 | 705..822 | 100 | -> | Plus |
2L | 8106840..8107000 | 823..983 | 100 | -> | Plus |
2L | 8107066..8107173 | 984..1091 | 100 | -> | Plus |
2L | 8107238..8107438 | 1092..1292 | 100 | -> | Plus |
2L | 8107748..8107880 | 1293..1425 | 100 | -> | Plus |
2L | 8110481..8110540 | 1426..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8102800..8103503 | 1..704 | 100 | -> | Plus |
2L | 8105692..8105809 | 705..822 | 100 | -> | Plus |
2L | 8106840..8107000 | 823..983 | 100 | -> | Plus |
2L | 8107066..8107173 | 984..1091 | 100 | -> | Plus |
2L | 8107238..8107438 | 1092..1292 | 100 | -> | Plus |
2L | 8107748..8107880 | 1293..1425 | 100 | -> | Plus |
2L | 8110481..8110540 | 1426..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8102800..8103503 | 1..704 | 100 | -> | Plus |
2L | 8105692..8105809 | 705..822 | 100 | -> | Plus |
2L | 8106840..8107000 | 823..983 | 100 | -> | Plus |
2L | 8107066..8107173 | 984..1091 | 100 | -> | Plus |
2L | 8107238..8107438 | 1092..1292 | 100 | -> | Plus |
2L | 8107748..8107880 | 1293..1425 | 100 | -> | Plus |
2L | 8110481..8110540 | 1426..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 8102800..8103503 | 1..704 | 100 | -> | Plus |
arm_2L | 8105692..8105809 | 705..822 | 100 | -> | Plus |
arm_2L | 8106840..8107000 | 823..983 | 100 | -> | Plus |
arm_2L | 8107066..8107173 | 984..1091 | 100 | -> | Plus |
arm_2L | 8107238..8107438 | 1092..1292 | 100 | -> | Plus |
arm_2L | 8107748..8107880 | 1293..1425 | 100 | -> | Plus |
arm_2L | 8110481..8110540 | 1426..1485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8102800..8103503 | 1..704 | 100 | -> | Plus |
2L | 8105692..8105809 | 705..822 | 100 | -> | Plus |
2L | 8106840..8107000 | 823..983 | 100 | -> | Plus |
2L | 8107066..8107173 | 984..1091 | 100 | -> | Plus |
2L | 8107238..8107438 | 1092..1292 | 100 | -> | Plus |
2L | 8107748..8107880 | 1293..1425 | 100 | -> | Plus |
2L | 8110481..8110540 | 1426..1485 | 100 | Plus |
Translation from 0 to 1452
> GH21853.hyp FTRAWLEQQQQQQQLPHQSHKLHKSHLGYGNASLSGSQPWHPSAGGGGIH RVYSATPPDFPPPRLNLLEQTVAPPEPPTILYNPNPTHPTASATATETSV LLTTAHHHAHHQQQLQQQSQHTLNAFQLPLPPRPNPGQNERYQTYAPHYV PPVVVSGAGAGAGADPGAGASGEQTTISAATSTRAMMGGGGGVAGAGFSA GASGPMLGAGGHMLMGGQGHQVHLQHQTLLPVKMDKLVPNYDNAEHQMKF YDIRSPLVLSCNVKDGTPGGVLIWKKNGTAVTDVPSLRGRFKLIADENKF IIDKTDTNDDGKYSCEFDGVSKEIEVIARVVVRVPSNTAVVEGEKMSVTC SVVGTKPELTWTFANVTLTNATDRFILKPDDNGVPNAILTLDNVTLDDRG EYKCIGRNAANVYGGNTTTPASDVTTVRVKGKFAALWPFLGICAEVLILC IIILIYEKRRNKSELEESDTDPQEQKKKRRNYD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Bsg-PG | 648 | CG31605-PG | 166..648 | 1..483 | 2572 | 100 | Plus |
Bsg-PB | 265 | CG31605-PB | 24..265 | 234..475 | 1262 | 99.6 | Plus |
Bsg-PH | 265 | CG31605-PH | 24..265 | 234..475 | 1262 | 99.6 | Plus |
Bsg-PF | 265 | CG31605-PF | 24..265 | 234..475 | 1262 | 99.6 | Plus |
Bsg-PA | 265 | CG31605-PA | 24..265 | 234..475 | 1262 | 99.6 | Plus |
Translation from 556 to 1452
> GH21853.pep MMGGGGGVAGAGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQTLLPVKMD KLVPNYDNAEHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKNGTAVTDVP SLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGVSKEIEVIARVVVRVP SNTAVVEGEKMSVTCSVVGTKPELTWTFANVTLTNATDRFILKPDDNGVP NAILTLDNVTLDDRGEYKCIGRNAANVYGGNTTTPASDVTTVRVKGKFAA LWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKKKRRNYD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14758-PA | 270 | GF14758-PA | 24..270 | 49..298 | 992 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10513-PA | 640 | GG10513-PA | 347..640 | 1..298 | 1526 | 95.3 | Plus |
Dere\GG18558-PA | 874 | GG18558-PA | 157..311 | 73..227 | 155 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11616-PA | 648 | GH11616-PA | 395..648 | 40..290 | 864 | 69.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Bsg-PG | 648 | CG31605-PG | 351..648 | 1..298 | 1566 | 100 | Plus |
Bsg-PB | 265 | CG31605-PB | 24..265 | 49..290 | 1262 | 99.6 | Plus |
Bsg-PH | 265 | CG31605-PH | 24..265 | 49..290 | 1262 | 99.6 | Plus |
Bsg-PF | 265 | CG31605-PF | 24..265 | 49..290 | 1262 | 99.6 | Plus |
Bsg-PA | 265 | CG31605-PA | 24..265 | 49..290 | 1262 | 99.6 | Plus |
Bsg-PI | 265 | CG31605-PI | 24..265 | 49..290 | 1262 | 99.6 | Plus |
Bsg-PC | 265 | CG31605-PC | 24..265 | 49..290 | 1262 | 99.6 | Plus |
Bsg-PD | 265 | CG31605-PD | 24..265 | 49..290 | 1262 | 99.6 | Plus |
Bsg-PE | 265 | CG31605-PE | 24..265 | 49..290 | 1262 | 99.6 | Plus |
Bsg-PJ | 266 | CG31605-PJ | 24..264 | 49..289 | 1257 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17919-PA | 272 | GI17919-PA | 24..272 | 49..298 | 924 | 73.3 | Plus |
Dmoj\GI16146-PA | 858 | GI16146-PA | 133..328 | 64..265 | 167 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24757-PA | 271 | GL24757-PA | 24..271 | 49..298 | 940 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16333-PA | 261 | GA16333-PA | 24..261 | 49..290 | 909 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16732-PA | 650 | GM16732-PA | 353..650 | 1..298 | 1551 | 96.3 | Plus |
Dsec\GM12701-PA | 888 | GM12701-PA | 171..325 | 73..227 | 149 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23503-PA | 493 | GD23503-PA | 323..493 | 120..290 | 888 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17691-PA | 655 | GJ17691-PA | 406..655 | 40..290 | 913 | 71.4 | Plus |
Dvir\GJ20377-PA | 84 | GJ20377-PA | 2..84 | 206..290 | 320 | 83.5 | Plus |
Dvir\GJ16423-PA | 855 | GJ16423-PA | 139..325 | 73..265 | 149 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15320-PA | 264 | GK15320-PA | 27..264 | 51..290 | 978 | 76.7 | Plus |