BDGP Sequence Production Resources |
Search the DGRC for GH21948
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 219 |
Well: | 48 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3793-RA |
Protein status: | GH21948.pep: gold |
Preliminary Size: | 1591 |
Sequenced Size: | 1588 |
Gene | Date | Evidence |
---|---|---|
CG3793 | 2001-01-01 | Release 2 assignment |
CG3793 | 2001-07-04 | Blastp of sequenced clone |
CG3793 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3793 | 2008-04-29 | Release 5.5 accounting |
CG3793 | 2008-08-15 | Release 5.9 accounting |
CG3793 | 2008-12-18 | 5.12 accounting |
1588 bp (1588 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051573
> GH21948.complete ATCGGTTCCTGCAGCTGTTTTCAAGCGAGAAAAAATTCGGAACAAGAAAA CAAGGATTCTGGAACTTGTGCTCGCCGCAGGAGCTGATTGTAAATAAGGA TCCAAGTGGAAACCGCCGAGTACACCAGTCGCAGAGCCATGGAGCCGCCA GCGTCGGCCGGAATCGCCGGCTCGACGCACAAGTTCCATCCGTGCGACGA GGCTGTGATAGCCACCAACGACGATGCCAGCGATTGCAAGCGATGTGCGG TGCGCTTGGGCTACTGGAAGGACGACTACATCGGGTACTTTGTGCGCAAC CAAGAGCGCAAGGCGCCGGAGATCAATCGCGGCTACTTTGCCCGTGTCAA GGGCGTGGAGATGTGCGTCGAGAAGTTTCTAAAGAAAACCTCGGGCAACT GCCAGATCATCAATTTGGGCTGCGGCTTCGACACACTCTACTTCCGGCTG AGGGACACCGCCCACCAGGTGAAGAACTTCATTGAGCTGGACTTCCCCAC GGTCACCGCCCGCAAGTGCTACACAATTAAGCGCAACAAGGCCCTGCTGG CCAGGATTCACGACGAGGATGGTGAGGTGCGGCTCAGTCCCACGGATCTG CATGGACCAAGCTACCACCTGATGGGCGTTGACCTGCGCAACCTCGACGA GGTGGACAGCAAGCTGCAGCAGGCAGAAGTTGATTACTCCCTGCCCACCA TATTTCTCGCCGAGTGCGTTCTGGTCTATATCGAGGCGCAAAACTGCCGT AACCTGCTCAAATGGATTGCGCAAAAGTTCCAAGCAGCCGTCTTTGTCAA CTACGAACAGGTCAACATGAACGACCGTTTCGGCGATGTGATGCTCAACA ATCTGCGCGGACGCGGCTGCAGCCTGGCCGGCGTTGAATCCTGCTTGTCG CTGGATACGCAGAGGAACCGCTTCAAGGACAGCGGCTGGACTGGCGCCCG CGCCTGGGACATGGTCCAGGTGTACGAGAGCATCTCGGCGGCCGAGAGGC AGCGAATCGAGCGGCTGGAAATGCTGGACGAGGGTGAACTGCTGCTCCAG CTTTTCCAGCACTACTGCCTGGTGGTCGCCTGGCTGGGCGTGGCCTTTCA GGATATAGATATCACCGTCGAAGAGTTAATGTCCTCGCTGAACATTGACT AGGAGTGAGTGAAGGTGGAAGGGATAGAGAGCCAACCTACTTGGATGCAC TATTTATTGACTCTGCTCGGTTTGGAGGAAGGCCATGCCAAAATATTTTG CTTCTCAACGTGTTAACCTAAACAGCAAGTAATTAAAGAGAAACCATCGA AATCAAAACATGTTTAGATATTTATCCTACACAGAGACCCACTCACAAAT GATCTAATTTGTATTAATTTAGTTGTTCCTTATATTTTTTTCTCTTGTTA CATTTTTATTATTTAATCGCTTAATATTTACTATTTTATCACCGAGTTGT GGCACAAAATATTGATAGGTGATCAATATGCCATTCATTCATTCCCCAAT TTAAGTGTGCGTTTAAATTGTAAATGTATTTTGAAATTATTAAAAAAAAA ACCAACTTAAATGCAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 15764396..15764846 | 1116..1564 | 2190 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 15763502..15763938 | 383..819 | 2125 | 99.1 | Plus |
chr2L | 23010047 | chr2L | 15762958..15763342 | 1..384 | 1845 | 99.2 | Plus |
chr2L | 23010047 | chr2L | 15763991..15764298 | 808..1115 | 1540 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 15765675..15766128 | 1116..1569 | 2270 | 100 | Plus |
2L | 23513712 | 2L | 15764781..15765217 | 383..819 | 2155 | 99.5 | Plus |
2L | 23513712 | 2L | 15764238..15764621 | 1..384 | 1920 | 100 | Plus |
2L | 23513712 | 2L | 15765270..15765577 | 808..1115 | 1540 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 15765675..15766128 | 1116..1569 | 2270 | 100 | Plus |
2L | 23513712 | 2L | 15764781..15765217 | 383..819 | 2155 | 99.5 | Plus |
2L | 23513712 | 2L | 15764238..15764621 | 1..384 | 1920 | 100 | Plus |
2L | 23513712 | 2L | 15765270..15765577 | 808..1115 | 1540 | 100 | Plus |
2L | 23513712 | 2L | 15766462..15766519 | 1490..1546 | 175 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 1059..1150 | 1348..1441 | 147 | 69.8 | Plus |
Dkoe\Gandalf | 979 | Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). | 808..946 | 1353..1503 | 130 | 61.8 | Plus |
Dbuz\INE-1 | 1467 | Dbuz\INE-1 ISBU1 1467bp | 130..209 | 1445..1365 | 124 | 68.2 | Minus |
Dvir\Helena | 691 | Dvir\Helena DV26847 691bp Derived from U26847 (Rel. 63, Last updated, Version 2). | 589..689 | 1468..1368 | 118 | 57.4 | Minus |
Doc | 4725 | Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). | 4687..4724 | 1417..1380 | 118 | 78.9 | Minus |
Dbuz\INE-1 | 1467 | Dbuz\INE-1 ISBU1 1467bp | 149..213 | 1440..1376 | 117 | 68.2 | Minus |
BS | 5142 | BS BS 5142bp | 5095..5139 | 1417..1373 | 117 | 73.3 | Minus |
Doc | 4725 | Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). | 520..556 | 390..426 | 113 | 78.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 15762958..15763342 | 1..384 | 99 | -> | Plus |
chr2L | 15763504..15763929 | 385..810 | 99 | -> | Plus |
chr2L | 15763994..15764298 | 811..1115 | 100 | -> | Plus |
chr2L | 15764396..15764846 | 1116..1564 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3793-RA | 1..1014 | 139..1152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3793-RA | 1..1014 | 139..1152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3793-RA | 1..1014 | 139..1152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3793-RA | 1..1014 | 139..1152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3793-RA | 1..1014 | 139..1152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3793-RA | 9..1572 | 1..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3793-RA | 9..1572 | 1..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3793-RA | 19..1582 | 1..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3793-RA | 9..1572 | 1..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3793-RA | 19..1582 | 1..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 15764238..15764621 | 1..384 | 100 | -> | Plus |
2L | 15764783..15765208 | 385..810 | 100 | -> | Plus |
2L | 15765273..15765577 | 811..1115 | 100 | -> | Plus |
2L | 15765675..15766123 | 1116..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 15764238..15764621 | 1..384 | 100 | -> | Plus |
2L | 15764783..15765208 | 385..810 | 100 | -> | Plus |
2L | 15765273..15765577 | 811..1115 | 100 | -> | Plus |
2L | 15765675..15766123 | 1116..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 15764238..15764621 | 1..384 | 100 | -> | Plus |
2L | 15764783..15765208 | 385..810 | 100 | -> | Plus |
2L | 15765273..15765577 | 811..1115 | 100 | -> | Plus |
2L | 15765675..15766123 | 1116..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 15764238..15764621 | 1..384 | 100 | -> | Plus |
arm_2L | 15764783..15765208 | 385..810 | 100 | -> | Plus |
arm_2L | 15765273..15765577 | 811..1115 | 100 | -> | Plus |
arm_2L | 15765675..15766123 | 1116..1564 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 15764238..15764621 | 1..384 | 100 | -> | Plus |
2L | 15764783..15765208 | 385..810 | 100 | -> | Plus |
2L | 15765273..15765577 | 811..1115 | 100 | -> | Plus |
2L | 15765675..15766123 | 1116..1564 | 100 | Plus |
Translation from 138 to 1151
> GH21948.pep MEPPASAGIAGSTHKFHPCDEAVIATNDDASDCKRCAVRLGYWKDDYIGY FVRNQERKAPEINRGYFARVKGVEMCVEKFLKKTSGNCQIINLGCGFDTL YFRLRDTAHQVKNFIELDFPTVTARKCYTIKRNKALLARIHDEDGEVRLS PTDLHGPSYHLMGVDLRNLDEVDSKLQQAEVDYSLPTIFLAECVLVYIEA QNCRNLLKWIAQKFQAAVFVNYEQVNMNDRFGDVMLNNLRGRGCSLAGVE SCLSLDTQRNRFKDSGWTGARAWDMVQVYESISAAERQRIERLEMLDEGE LLLQLFQHYCLVVAWLGVAFQDIDITVEELMSSLNID*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14921-PA | 344 | GF14921-PA | 1..344 | 1..337 | 1762 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25173-PA | 337 | GG25173-PA | 1..337 | 1..337 | 1818 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13430-PA | 340 | GH13430-PA | 1..340 | 1..337 | 1687 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3793-PA | 337 | CG3793-PA | 1..337 | 1..337 | 1783 | 100 | Plus |
CG3793-PB | 341 | CG3793-PB | 1..341 | 1..337 | 1768 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13964-PA | 340 | GI13964-PA | 1..340 | 1..337 | 1701 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15459-PA | 341 | GL15459-PA | 1..341 | 1..337 | 1740 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17689-PA | 341 | GA17689-PA | 1..341 | 1..337 | 1740 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16139-PA | 337 | GM16139-PA | 1..337 | 1..337 | 1818 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24020-PA | 337 | GD24020-PA | 1..337 | 1..337 | 1812 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18234-PA | 340 | GJ18234-PA | 1..340 | 1..337 | 1700 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24762-PA | 343 | GK24762-PA | 1..343 | 1..337 | 1721 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21133-PA | 337 | GE21133-PA | 1..337 | 1..337 | 1818 | 100 | Plus |
Translation from 138 to 1151
> GH21948.hyp MEPPASAGIAGSTHKFHPCDEAVIATNDDASDCKRCAVRLGYWKDDYIGY FVRNQERKAPEINRGYFARVKGVEMCVEKFLKKTSGNCQIINLGCGFDTL YFRLRDTAHQVKNFIELDFPTVTARKCYTIKRNKALLARIHDEDGEVRLS PTDLHGPSYHLMGVDLRNLDEVDSKLQQAEVDYSLPTIFLAECVLVYIEA QNCRNLLKWIAQKFQAAVFVNYEQVNMNDRFGDVMLNNLRGRGCSLAGVE SCLSLDTQRNRFKDSGWTGARAWDMVQVYESISAAERQRIERLEMLDEGE LLLQLFQHYCLVVAWLGVAFQDIDITVEELMSSLNID*