BDGP Sequence Production Resources |
Search the DGRC for GH21972
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 219 |
Well: | 72 |
Vector: | pOT2 |
Associated Gene/Transcript | CG7616-RA |
Protein status: | GH21972.pep: gold |
Sequenced Size: | 2070 |
Gene | Date | Evidence |
---|---|---|
CG7616 | 2008-04-29 | Release 5.5 accounting |
CG7616 | 2008-04-29 | Picked prior to 5.5 |
CG7616 | 2008-08-15 | Release 5.9 accounting |
CG7616 | 2008-12-18 | 5.12 accounting |
2070 bp assembled on 2008-01-15
GenBank Submission: BT031348
> GH21972.complete GTGTCCAAAGAGTAAACATTGGGTGAACTTTGCAGCGGGCGGACAGAAAA TGCGACCTCTCCAGCGTGTGCGGCAGTTGCTGAGCCTCGGAACACGGATT CGAGGCAAAAGAGCACTCAATGGCCTGCGAGAGGCGAATGTCCAGAAAGG CGGTCGTCCTGTATTGCGATTTAGTCTTTTGGCAGCCGGCGCAGGTGGCC TGGCTTACGATGGGATAGTAAATGACTTCACCTACTGCGGCGCCTCCGTG CGATTTGTACGATCCTTAAAAACAGCCGGATTGATAGCCGCTGACTATCT GCGGCTGGACGAGAACGATCCGGAGTACGAAACAAAGGTGAAGCTGCTCC ACAAGAAGAGTGCCGAGCGTCTGCTGGAGACGTGCCTGCTCAACGGCGGT CTGTACATCAAGGTGGGCCAGGGATTCGCGGCCATCAATGACATTCTGCC CGTGGAATACACCAGCACGCTGTCCCTGCTGCAGGATAGATGTCTGCCCA CCACTCAAGCTGATGTTCAGAAGGTCTTTCGCAAGGATTTTGGCCAGTTG CCCGAGGAGATATACCAGGAGTTCGACTATCAGCCCGTGGCGGCCGCCAG CTTGGCGCAGGTTTTCAAAGCCAGGCTGCCCAGCGGCGAGCAGGTGGCCG TCAAGGTGCAATACAACGATCTGCAGAAGAGATTCATCAGCGACCTAGGC ACCATCATCTTTCTTCAGGACATTGTCGAGTTCTTCTTTAAGGACTACAA CTTTGGATGGATCTTGAATGACCTGCGTAAGAACCTGGTGCTGGAGCTGA ACTTTTTGCAGGAGGGACAAAATGCCGAACGCTGCGCCAAGGATATGGAA AAGTTCAGCTATGTCCACGTTCCCAAGGTGCATTGGTCGTATACTAAAAC GCGCGTGCTCACTCTTGAGTGGATGGATGGATGCAAGATCAGCGATCTTA AGACGATTGAAAAAGAAAAACTCAGCTTAAAGGACATCGATGTGAAGCTC TTTGAGGCCTTTGCTGAACAGATTTTCTACACTGGCTTCGTGCACGCCGA TCCCCATCCAGGAAATATTTTTGTGAGAAAAAATAGAAAAAACGGGCGTG CGGACATCATCTTGCTGGATCATGGACTTTACGAAGAACTGCCTCAAAAT GTGCGAGGTCCACTCTGCGAATTCTGGGAGGCCACCGTTCTGCGCCAAGA GAATCGGATGCAGGCCGCCGCCGAGAAGATCGGTATCGGTGACTACATGC GCTTCGCCGAAGTGCTTTTCCAGCAGCCCATCCGGAATCGAGGTGGTGGC ATACGCGGCAAACTGACGCAGGAGGACATCGATCACATGCAGGAGATAGC CAGGAATAATTTCGAGCACATCATGGGCACCCTGAAGGAGATGCCCAGAA GCATGTTGTTCGTGGTGCGTAATCTGAACACAGTGCGTGCCATTAGTCAT CAGCATGGAGACGTGGTGAATCGTCCTCGGGTCATGGCGCGATATGCCCA GAAATGCCTGTATATGCAGCACAATAGAAGGTCTCCCGTGCAATATATCC GTTGGCTAAGTGGACGCATATACTTCGAATACTGTCTGTTTCTGTCAGCC TTCAAGCTATATCTGCTCGACTGGTACTTCAACATCCTGTACCTAGTGGG TCGGGCTCCTGCCTCTGCGAGAACCGTAATGAAAGATATAATGCAACCTC CGGAGCCGAATGTGTTGAAATAAGTACGCTAACCGTTTGCTTTACGTCTA AATCATAAGTTCAAAATGTACATTTTTATGTAAATGTTGTATACATCATT TTTATTCCACTAACTTATTCTCAGAAATATGTAACCTTGTATGTGTTCAA CTTGATGGGCGAAAATCCCGTCGAACCATGACAATATGAATGTAATTATT TTATAATATGACAGAGAATGAGTAGTTTTTATAGTATGTAAACACATGTT TATTCTAAAGCGATGAGCGAAGTATTTATGCCTTTATGATGCTTTACTTT TAATTGGCTATTAAGGTGTAGGATTTCTGAATAAATTTACTAATCACTTG TAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11161055..11161893 | 63..901 | 4180 | 99.9 | Plus |
chr3L | 24539361 | chr3L | 11162621..11163258 | 1414..2051 | 3130 | 99.4 | Plus |
chr3L | 24539361 | chr3L | 11162209..11162557 | 1068..1416 | 1745 | 100 | Plus |
chr3L | 24539361 | chr3L | 11161976..11162142 | 901..1067 | 835 | 100 | Plus |
chr3L | 24539361 | chr3L | 11160935..11160998 | 1..64 | 320 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11170208..11171046 | 63..901 | 4195 | 100 | Plus |
3L | 28110227 | 3L | 11171774..11172413 | 1414..2053 | 3200 | 100 | Plus |
3L | 28110227 | 3L | 11171362..11171710 | 1068..1416 | 1745 | 100 | Plus |
3L | 28110227 | 3L | 11171129..11171295 | 901..1067 | 835 | 100 | Plus |
3L | 28110227 | 3L | 11170086..11170149 | 1..64 | 320 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11163308..11164146 | 63..901 | 4195 | 100 | Plus |
3L | 28103327 | 3L | 11164874..11165513 | 1414..2053 | 3200 | 100 | Plus |
3L | 28103327 | 3L | 11164462..11164810 | 1068..1416 | 1745 | 100 | Plus |
3L | 28103327 | 3L | 11164229..11164395 | 901..1067 | 835 | 100 | Plus |
3L | 28103327 | 3L | 11163186..11163249 | 1..64 | 320 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 1521..1628 | 1935..2043 | 119 | 57.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11160935..11160998 | 1..64 | 100 | -> | Plus |
chr3L | 11161057..11161893 | 65..901 | 99 | -> | Plus |
chr3L | 11161977..11162142 | 902..1067 | 100 | -> | Plus |
chr3L | 11162209..11162555 | 1068..1414 | 100 | -> | Plus |
chr3L | 11162622..11163258 | 1415..2051 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7616-RA | 1..1674 | 50..1723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7616-RA | 1..1674 | 50..1723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7616-RA | 1..1674 | 50..1723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7616-RA | 1..1674 | 50..1723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7616-RA | 1..1674 | 50..1723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7616-RA | 289..2339 | 1..2051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7616-RA | 289..2339 | 1..2051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7616-RA | 270..2320 | 1..2051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7616-RA | 289..2099 | 1..1811 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7616-RA | 270..2320 | 1..2051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11170086..11170149 | 1..64 | 100 | -> | Plus |
3L | 11170210..11171046 | 65..901 | 100 | -> | Plus |
3L | 11171130..11171295 | 902..1067 | 100 | -> | Plus |
3L | 11171362..11171708 | 1068..1414 | 100 | -> | Plus |
3L | 11171775..11172411 | 1415..2051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11170086..11170149 | 1..64 | 100 | -> | Plus |
3L | 11170210..11171046 | 65..901 | 100 | -> | Plus |
3L | 11171130..11171295 | 902..1067 | 100 | -> | Plus |
3L | 11171362..11171708 | 1068..1414 | 100 | -> | Plus |
3L | 11171775..11172411 | 1415..2051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11170086..11170149 | 1..64 | 100 | -> | Plus |
3L | 11170210..11171046 | 65..901 | 100 | -> | Plus |
3L | 11171130..11171295 | 902..1067 | 100 | -> | Plus |
3L | 11171362..11171708 | 1068..1414 | 100 | -> | Plus |
3L | 11171775..11172411 | 1415..2051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11163186..11163249 | 1..64 | 100 | -> | Plus |
arm_3L | 11163310..11164146 | 65..901 | 100 | -> | Plus |
arm_3L | 11164230..11164395 | 902..1067 | 100 | -> | Plus |
arm_3L | 11164462..11164808 | 1068..1414 | 100 | -> | Plus |
arm_3L | 11164875..11165511 | 1415..2051 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11163310..11164146 | 65..901 | 100 | -> | Plus |
3L | 11164230..11164395 | 902..1067 | 100 | -> | Plus |
3L | 11164462..11164808 | 1068..1414 | 100 | -> | Plus |
3L | 11164875..11165511 | 1415..2051 | 100 | Plus | |
3L | 11163186..11163249 | 1..64 | 100 | -> | Plus |
Translation from 0 to 1722
> GH21972.hyp CPKSKHWVNFAAGGQKMRPLQRVRQLLSLGTRIRGKRALNGLREANVQKG GRPVLRFSLLAAGAGGLAYDGIVNDFTYCGASVRFVRSLKTAGLIAADYL RLDENDPEYETKVKLLHKKSAERLLETCLLNGGLYIKVGQGFAAINDILP VEYTSTLSLLQDRCLPTTQADVQKVFRKDFGQLPEEIYQEFDYQPVAAAS LAQVFKARLPSGEQVAVKVQYNDLQKRFISDLGTIIFLQDIVEFFFKDYN FGWILNDLRKNLVLELNFLQEGQNAERCAKDMEKFSYVHVPKVHWSYTKT RVLTLEWMDGCKISDLKTIEKEKLSLKDIDVKLFEAFAEQIFYTGFVHAD PHPGNIFVRKNRKNGRADIILLDHGLYEELPQNVRGPLCEFWEATVLRQE NRMQAAAEKIGIGDYMRFAEVLFQQPIRNRGGGIRGKLTQEDIDHMQEIA RNNFEHIMGTLKEMPRSMLFVVRNLNTVRAISHQHGDVVNRPRVMARYAQ KCLYMQHNRRSPVQYIRWLSGRIYFEYCLFLSAFKLYLLDWYFNILYLVG RAPASARTVMKDIMQPPEPNVLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7616-PB | 557 | CG7616-PB | 1..557 | 17..573 | 2902 | 100 | Plus |
CG7616-PA | 557 | CG7616-PA | 1..557 | 17..573 | 2902 | 100 | Plus |
CG3608-PB | 518 | CG3608-PB | 4..442 | 52..481 | 672 | 34.8 | Plus |
CG3608-PA | 518 | CG3608-PA | 4..442 | 52..481 | 672 | 34.8 | Plus |
CG32649-PA | 661 | CG32649-PA | 272..511 | 115..355 | 168 | 21.8 | Plus |
Translation from 1 to 1722
> GH21972.pep CPKSKHWVNFAAGGQKMRPLQRVRQLLSLGTRIRGKRALNGLREANVQKG GRPVLRFSLLAAGAGGLAYDGIVNDFTYCGASVRFVRSLKTAGLIAADYL RLDENDPEYETKVKLLHKKSAERLLETCLLNGGLYIKVGQGFAAINDILP VEYTSTLSLLQDRCLPTTQADVQKVFRKDFGQLPEEIYQEFDYQPVAAAS LAQVFKARLPSGEQVAVKVQYNDLQKRFISDLGTIIFLQDIVEFFFKDYN FGWILNDLRKNLVLELNFLQEGQNAERCAKDMEKFSYVHVPKVHWSYTKT RVLTLEWMDGCKISDLKTIEKEKLSLKDIDVKLFEAFAEQIFYTGFVHAD PHPGNIFVRKNRKNGRADIILLDHGLYEELPQNVRGPLCEFWEATVLRQE NRMQAAAEKIGIGDYMRFAEVLFQQPIRNRGGGIRGKLTQEDIDHMQEIA RNNFEHIMGTLKEMPRSMLFVVRNLNTVRAISHQHGDVVNRPRVMARYAQ KCLYMQHNRRSPVQYIRWLSGRIYFEYCLFLSAFKLYLLDWYFNILYLVG RAPASARTVMKDIMQPPEPNVLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25249-PA | 558 | GF25249-PA | 1..555 | 17..571 | 2272 | 75.4 | Plus |
Dana\GF12996-PA | 518 | GF12996-PA | 4..503 | 52..538 | 694 | 33.9 | Plus |
Dana\GF20885-PA | 681 | GF20885-PA | 292..547 | 115..375 | 176 | 23 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15486-PA | 557 | GG15486-PA | 1..557 | 17..573 | 2786 | 94.8 | Plus |
Dere\GG22994-PA | 518 | GG22994-PA | 4..442 | 52..481 | 687 | 34.8 | Plus |
Dere\GG19534-PA | 661 | GG19534-PA | 272..513 | 115..357 | 170 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14836-PA | 515 | GH14836-PA | 3..506 | 59..563 | 2040 | 73.3 | Plus |
Dgri\GH20324-PA | 441 | GH20324-PA | 3..434 | 52..474 | 645 | 34.2 | Plus |
Dgri\GH17620-PA | 692 | GH17620-PA | 303..558 | 115..375 | 174 | 23.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7616-PB | 557 | CG7616-PB | 1..557 | 17..573 | 2902 | 100 | Plus |
CG7616-PA | 557 | CG7616-PA | 1..557 | 17..573 | 2902 | 100 | Plus |
Adck-PB | 518 | CG3608-PB | 4..442 | 52..481 | 672 | 34.8 | Plus |
Adck-PA | 518 | CG3608-PA | 4..442 | 52..481 | 672 | 34.8 | Plus |
Coq8-PA | 661 | CG32649-PA | 272..511 | 115..355 | 168 | 21.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13688-PA | 559 | GI13688-PA | 43..559 | 55..573 | 1955 | 68.6 | Plus |
Dmoj\GI19996-PA | 515 | GI19996-PA | 3..500 | 52..538 | 690 | 33.4 | Plus |
Dmoj\GI16276-PA | 692 | GI16276-PA | 303..558 | 115..375 | 178 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22769-PA | 559 | GL22769-PA | 1..553 | 17..568 | 2315 | 77.6 | Plus |
Dper\GL10232-PA | 517 | GL10232-PA | 4..502 | 52..538 | 685 | 33.7 | Plus |
Dper\GL22961-PA | 661 | GL22961-PA | 272..513 | 115..357 | 171 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20483-PA | 559 | GA20483-PA | 1..553 | 17..568 | 2316 | 77.4 | Plus |
Dpse\GA17555-PA | 517 | GA17555-PA | 4..502 | 52..538 | 680 | 33.5 | Plus |
Dpse\GA17042-PA | 661 | GA17042-PA | 272..513 | 115..357 | 171 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25258-PA | 557 | GM25258-PA | 1..557 | 17..573 | 2909 | 97.1 | Plus |
Dsec\GM11887-PA | 518 | GM11887-PA | 4..442 | 52..481 | 688 | 34.8 | Plus |
Dsec\GM11527-PA | 661 | GM11527-PA | 272..513 | 115..357 | 173 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14292-PA | 557 | GD14292-PA | 1..557 | 17..573 | 2908 | 96.9 | Plus |
Dsim\GD11885-PA | 518 | GD11885-PA | 4..442 | 52..481 | 692 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14030-PA | 554 | GJ14030-PA | 35..545 | 53..565 | 2091 | 75 | Plus |
Dvir\GJ21245-PA | 515 | GJ21245-PA | 3..480 | 52..518 | 684 | 33.4 | Plus |
Dvir\GJ16920-PA | 681 | GJ16920-PA | 292..547 | 115..375 | 183 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20341-PA | 468 | GK20341-PA | 3..467 | 102..570 | 2046 | 79.1 | Plus |
Dwil\GK21422-PA | 518 | GK21422-PA | 5..503 | 52..538 | 681 | 33.4 | Plus |
Dwil\GK10272-PA | 695 | GK10272-PA | 306..505 | 115..313 | 182 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21796-PA | 557 | GE21796-PA | 1..557 | 17..573 | 2804 | 95.5 | Plus |
Dyak\GE14431-PA | 520 | GE14431-PA | 4..442 | 52..481 | 683 | 34.5 | Plus |
Dyak\GE16192-PA | 661 | GE16192-PA | 272..513 | 115..357 | 168 | 22.7 | Plus |