Clone GH22016 Report

Search the DGRC for GH22016

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:220
Well:16
Vector:pOT2
Associated Gene/TranscriptCG10949-RA
Protein status:GH22016.pep: gold
Preliminary Size:1608
Sequenced Size:1538

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10949 2001-01-01 Release 2 assignment
CG10949 2001-09-19 Blastp of sequenced clone
CG10949 2003-01-01 Sim4 clustering to Release 3
CG10949 2008-04-29 Release 5.5 accounting
CG10949 2008-08-15 Release 5.9 accounting
CG10949 2008-12-18 5.12 accounting

Clone Sequence Records

GH22016.complete Sequence

1538 bp (1538 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058441

> GH22016.complete
CCGGATCGTTCAGAATAAATAAAAACAAATAATAGCGAAAATCAATGGAC
GACGATGAGCTGATTAAATTGATAGAGAGACACCCGATCCTGTACGACAA
GGACTGCGCGAGGAGCGTGAAGAATGCGGCGCAAAAGGACGCGGCCTGGA
AGGCCATCTCCCAGAAGTTAGGAGCCTCGGAACGGGCGTGCATTACGCGC
TGGAAGAGCATTCGCGATCGTTTCGGCAAGGAGTTTCGCCGTTTCCAGGA
GCGTCCGGATGAGCCCACCTACTGGGACATGTTTCCGCGACTGCTCTTTC
TCAAGGATCACTACAAACAGGGACTGGCAAGGAACGAGAGTCTCGACGGG
ATGCGTTTTGAGCCCAGGGAGCGGAAAAAGCGCACAAAAGTGGACATGGA
GCAGGAGAGGCGGAGAAAGGACGAGGAGGAGGAGGACTCCCAGGATGACC
TGCTGAACGAGCAGCTCATTGAGCTGGTCAAGTCTCATCCCGTGCTGTAT
GATCGTCACAAGATCAGAGTCTCCAAGAACCTAGCAGCGAAAAACGAAGC
CTGGCGAGAGATTTCTGAAAACCTAAATGTGTCGGAGGAACTTTGCTACA
ACCGCTGGAAGAAGCTGCGTGATCGTTTCGGGCGGGAGTTCCGCAGTCAT
CAGATCAACCAGTCCACGCCCATCACGTGGAGGTACTTTAACGACCTTCT
CTTTCTGGGCCGCCACTTCCGCAAAGGAGTGCCCCTGGTTTTGGAGAACA
TCAAGCGACGTGGACGACCACCCAAAGCAGGAAATCCTTCGGGAAAGACC
AGCAAACAGCCGGAGGGAATGGTGATCTCCAGTGGTGAGCAAATCTGGGG
CGCTGATTACCCCTACAGTACGGACAACGACGATCTGGAGGATGATCTTG
AGTTGGCCTACGATGAAGAGATTGAGATACTATCGGAGGCGGAGCAAGCA
ACGCCGTACGATTTTATCCTCAGCGAAGCGACGGCACGGCAGGACTTGGA
GCCACCACAGCAGCTCCAGGTGACCACCACCACGCCGGCCACCAGTGAGG
AAATAATTCACACAATCGCCAGGGTAAATCCCGTCGTAGAGGAGTCCTCC
TCTCTCCCTGGGGACTCTGTACCGTCTGCCGCCATCTCCGACAAACTGTT
GACCACCGTGATTGCCAACATGGAGACCGTGCTTCAGCAATCCCGGGAGC
TGCAGGCCCAGATTCACCACGAACAGGAGCAGGAGCGAGAACAGCGAAGT
ACACAGCCTGCCAACAGCCTGCTTGCCAAGGCTCAGATGCTGCTGGACGG
ACTGAGTCCGTCTGAGCGGGCAAGTGCCGAGCGTAAGATCGTGCAGTTCC
TGTGCCAGTGCCAAATCAAAGCCCTCGATGGCGAGGAGATCGAGGATGTG
GCACCTTGTCAGGTCATTAACTGAAATTAGAATGTTGTAGATTAGCTGCA
AAAGTATTACGAAGAAGGGTTATTACATAAGTGTAAGCATGAAAATATCT
GTAAATAAATAAACTTACTAAAAAAAAAAAAAAAAAAA

GH22016.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:21:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG10949-RA 1725 CG10949-RA 171..1692 1..1522 7610 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:12:40
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 20413582..20414516 1519..585 4585 99.4 Minus
chr2L 23010047 chr2L 20414573..20415157 585..1 2895 99.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:02:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:12:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20415170..20416107 1522..585 4690 100 Minus
2L 23513712 2L 20416164..20416748 585..1 2925 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:44:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20415170..20416107 1522..585 4690 100 Minus
2L 23513712 2L 20416164..20416748 585..1 2925 100 Minus
Blast to na_te.dros performed on 2019-03-16 13:12:39 has no hits.

GH22016.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:13:24 Download gff for GH22016.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 20413582..20414515 586..1519 99 <- Minus
chr2L 20414573..20415157 1..585 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:52:08 Download gff for GH22016.complete
Subject Subject Range Query Range Percent Splice Strand
CG10949-RA 1..1380 45..1424 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:05:48 Download gff for GH22016.complete
Subject Subject Range Query Range Percent Splice Strand
CG10949-RA 1..1380 45..1424 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 15:55:21 Download gff for GH22016.complete
Subject Subject Range Query Range Percent Splice Strand
CG10949-RA 1..1380 45..1424 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:36:29 Download gff for GH22016.complete
Subject Subject Range Query Range Percent Splice Strand
CG10949-RA 1..1380 45..1424 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:11:14 Download gff for GH22016.complete
Subject Subject Range Query Range Percent Splice Strand
CG10949-RA 1..1380 45..1424 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:55:20 Download gff for GH22016.complete
Subject Subject Range Query Range Percent Splice Strand
CG10949-RA 171..1689 1..1519 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:05:48 Download gff for GH22016.complete
Subject Subject Range Query Range Percent Splice Strand
CG10949-RA 171..1689 1..1519 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:55:21 Download gff for GH22016.complete
Subject Subject Range Query Range Percent Splice Strand
CG10949-RA 21..1539 1..1519 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:36:29 Download gff for GH22016.complete
Subject Subject Range Query Range Percent Splice Strand
CG10949-RA 171..1689 1..1519 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:11:14 Download gff for GH22016.complete
Subject Subject Range Query Range Percent Splice Strand
CG10949-RA 21..1539 1..1519 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:13:24 Download gff for GH22016.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20415173..20416106 586..1519 100 <- Minus
2L 20416164..20416748 1..585 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:13:24 Download gff for GH22016.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20415173..20416106 586..1519 100 <- Minus
2L 20416164..20416748 1..585 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:13:24 Download gff for GH22016.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20415173..20416106 586..1519 100 <- Minus
2L 20416164..20416748 1..585 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:55:21 Download gff for GH22016.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20415173..20416106 586..1519 100 <- Minus
arm_2L 20416164..20416748 1..585 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:13:38 Download gff for GH22016.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20415173..20416106 586..1519 100 <- Minus
2L 20416164..20416748 1..585 100   Minus

GH22016.pep Sequence

Translation from 44 to 1423

> GH22016.pep
MDDDELIKLIERHPILYDKDCARSVKNAAQKDAAWKAISQKLGASERACI
TRWKSIRDRFGKEFRRFQERPDEPTYWDMFPRLLFLKDHYKQGLARNESL
DGMRFEPRERKKRTKVDMEQERRRKDEEEEDSQDDLLNEQLIELVKSHPV
LYDRHKIRVSKNLAAKNEAWREISENLNVSEELCYNRWKKLRDRFGREFR
SHQINQSTPITWRYFNDLLFLGRHFRKGVPLVLENIKRRGRPPKAGNPSG
KTSKQPEGMVISSGEQIWGADYPYSTDNDDLEDDLELAYDEEIEILSEAE
QATPYDFILSEATARQDLEPPQQLQVTTTTPATSEEIIHTIARVNPVVEE
SSSLPGDSVPSAAISDKLLTTVIANMETVLQQSRELQAQIHHEQEQEREQ
RSTQPANSLLAKAQMLLDGLSPSERASAERKIVQFLCQCQIKALDGEEIE
DVAPCQVIN*

GH22016.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:53:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15373-PA 460 GF15373-PA 1..460 1..459 1919 79.2 Plus
Dana\GF11060-PA 535 GF11060-PA 298..372 141..221 170 43.2 Plus
Dana\GF24603-PA 302 GF24603-PA 17..116 137..241 155 32.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:53:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21572-PA 459 GG21572-PA 1..459 1..459 2202 93.7 Plus
Dere\GG23211-PA 253 GG23211-PA 16..90 141..221 167 43.2 Plus
Dere\GG15683-PA 238 GG15683-PA 17..115 137..242 163 35.8 Plus
Dere\GG23211-PA 253 GG23211-PA 13..103 3..102 150 35 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:53:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11654-PA 502 GH11654-PA 1..442 1..453 1239 58.1 Plus
Dgri\GH21743-PA 253 GH21743-PA 16..90 141..221 174 44.4 Plus
Dgri\GH21743-PA 253 GH21743-PA 13..103 3..102 157 36 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:17:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG10949-PB 459 CG10949-PB 1..459 1..459 2381 100 Plus
CG10949-PA 459 CG10949-PA 1..459 1..459 2381 100 Plus
Adf1-PC 262 CG15845-PC 9..245 129..391 173 25.7 Plus
Adf1-PB 253 CG15845-PB 2..236 131..391 170 25.6 Plus
Adf1-PA 253 CG15845-PA 2..236 131..391 170 25.6 Plus
Adf1-PE 274 CG15845-PE 2..236 131..391 170 25.6 Plus
CG3919-PB 302 CG3919-PB 17..115 137..242 163 35.8 Plus
CG3919-PC 318 CG3919-PC 17..115 137..242 163 35.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:53:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17956-PA 461 GI17956-PA 1..461 1..459 1349 58.9 Plus
Dmoj\GI19291-PA 253 GI19291-PA 16..90 141..221 174 44.4 Plus
Dmoj\GI19291-PA 253 GI19291-PA 13..103 3..102 156 36 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:53:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26413-PA 448 GL26413-PA 1..447 1..459 1415 63 Plus
Dper\GL11108-PA 250 GL11108-PA 16..90 141..221 167 43.2 Plus
Dper\GL11108-PA 250 GL11108-PA 13..103 3..102 150 35 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:53:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10661-PA 448 GA10661-PA 1..447 1..459 1472 63.2 Plus
Dpse\GA13983-PA 250 GA13983-PA 16..90 141..221 167 43.2 Plus
Dpse\GA13983-PA 250 GA13983-PA 13..103 3..102 150 35 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:53:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23328-PA 459 GM23328-PA 1..459 1..459 2361 96.7 Plus
Dsec\GM25465-PA 306 GM25465-PA 25..123 137..242 177 37.7 Plus
Dsec\GM20885-PA 253 GM20885-PA 16..90 141..221 167 43.2 Plus
Dsec\GM20885-PA 253 GM20885-PA 13..103 3..102 150 35 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:53:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21703-PA 459 GD21703-PA 1..459 1..459 2360 96.5 Plus
Dsim\GD10415-PA 253 GD10415-PA 16..90 141..221 167 43.2 Plus
Dsim\GD10415-PA 253 GD10415-PA 13..103 3..102 150 35 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:53:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17728-PA 327 GJ17728-PA 3..327 155..459 806 51.5 Plus
Dvir\GJ17728-PA 327 GJ17728-PA 6..77 23..94 186 45.8 Plus
Dvir\GJ22167-PA 253 GJ22167-PA 16..90 141..221 174 44.4 Plus
Dvir\GJ22167-PA 253 GJ22167-PA 13..103 3..102 157 36 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:53:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18122-PA 430 GK18122-PA 1..428 1..456 1242 56.9 Plus
Dwil\GK23084-PA 253 GK23084-PA 16..90 141..221 166 43.2 Plus
Dwil\GK12702-PA 371 GK12702-PA 17..119 138..240 158 33.7 Plus
Dwil\GK23084-PA 253 GK23084-PA 13..103 3..102 150 35 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:53:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12593-PA 459 GE12593-PA 1..459 1..459 2174 91.1 Plus
Dyak\GE19065-PA 253 GE19065-PA 16..90 141..221 167 43.2 Plus
Dyak\GE22013-PA 321 GE22013-PA 17..116 137..241 163 34.3 Plus
Dyak\GE19065-PA 253 GE19065-PA 13..103 3..102 150 35 Plus

GH22016.hyp Sequence

Translation from 44 to 1423

> GH22016.hyp
MDDDELIKLIERHPILYDKDCARSVKNAAQKDAAWKAISQKLGASERACI
TRWKSIRDRFGKEFRRFQERPDEPTYWDMFPRLLFLKDHYKQGLARNESL
DGMRFEPRERKKRTKVDMEQERRRKDEEEEDSQDDLLNEQLIELVKSHPV
LYDRHKIRVSKNLAAKNEAWREISENLNVSEELCYNRWKKLRDRFGREFR
SHQINQSTPITWRYFNDLLFLGRHFRKGVPLVLENIKRRGRPPKAGNPSG
KTSKQPEGMVISSGEQIWGADYPYSTDNDDLEDDLELAYDEEIEILSEAE
QATPYDFILSEATARQDLEPPQQLQVTTTTPATSEEIIHTIARVNPVVEE
SSSLPGDSVPSAAISDKLLTTVIANMETVLQQSRELQAQIHHEQEQEREQ
RSTQPANSLLAKAQMLLDGLSPSERASAERKIVQFLCQCQIKALDGEEIE
DVAPCQVIN*

GH22016.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:43:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG10949-PB 459 CG10949-PB 1..459 1..459 2381 100 Plus
CG10949-PA 459 CG10949-PA 1..459 1..459 2381 100 Plus
Adf1-PC 262 CG15845-PC 9..245 129..391 173 25.7 Plus
Adf1-PB 253 CG15845-PB 2..236 131..391 170 25.6 Plus
Adf1-PA 253 CG15845-PA 2..236 131..391 170 25.6 Plus