BDGP Sequence Production Resources |
Search the DGRC for GH22074
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 220 |
Well: | 74 |
Vector: | pOT2 |
Associated Gene/Transcript | rux-RA |
Protein status: | GH22074.pep: gold |
Preliminary Size: | 1391 |
Sequenced Size: | 1343 |
Gene | Date | Evidence |
---|---|---|
CG4336 | 2001-01-01 | Release 2 assignment |
CG4336 | 2002-06-07 | Blastp of sequenced clone |
CG4336 | 2003-01-01 | Sim4 clustering to Release 3 |
rux | 2008-04-29 | Release 5.5 accounting |
rux | 2008-08-15 | Release 5.9 accounting |
rux | 2008-12-18 | 5.12 accounting |
1343 bp (1343 high quality bases) assembled on 2002-06-07
GenBank Submission: AY119537
> GH22074.complete TCCAAGTCGAATTGTATATATTGTAAATTATATTTATTTTTTATAAGCGC AATCGCATGAAAATACTTGAAGGAAATGAGCGCTCCAGAAGAACATAAGG AGACGCCTTTGGAGGTGATCCATGAGTTCATCAATGGCGTAGATGATGGG ACCATACGCCGCGACCTGGGGGAGGACTGCATCCTCAGCTTCTACAGTCG AAATGTGCGTGGCGCCAAGGCAATCACCGGATTTTTGAGAAACCAGTTGA CAATGCGCTACAAGCACGAGGGATTCGAGGAAGCAGCACAAATTGAGTGG GGCGACGAACTTCTGCTGAAGGCGCGCTTCGGCAGATCGTTTGACTCGGA ACGTCGTCGCATCTACGAGGAGAAGGAGCGCACAGGCACCACTCTGCATG TGCGTCCAGAGAGCGATGACGAGGAGGTAAATGAAAAGTTTTCCTCAACC CTGATCACACCGCCCCGTCCATCGAGCTACAATTTGAACTCCCTGAAGTA TGTGGAGGCGTGTGGCCTGTTGAACAAGCGTAATGAACATATCTACGGCG GCCTGGACATGGGCGAGTCATGCGCGGTCCACCTTACTTTGGGCTATCGG AGCACCTTTCTGCCCGGCGGTCAAGTGAGCGGCTTTGAAATCTGCCTGGC TGTCTACGATCGGGGTCTGACAAGCCTCAAACGATCCACTCTGATTCCGC CACTGTGCAGCATTTCCTTTGCACGACGGGCCAGCGCCCGATGTAATCCA ACCACCGATGATGAGGAGGATACCGAGGAGGATTCAACGCCGCCAACAGC GAGGCGCTGCGTGCGTCGTACTTTATTTACAGAGGAGAACACTCAGAAAG AAGAGGATGCCGATTTCATACCCGTGGTGGAGCAAGAGCAGCCAGCACCG CAGGAGCAGCCAGCACCGCAGCAGGCTGAGGAGACTGGCGAGGTAGTGAT CCCCGTAGATATATCCACAGCCTTGAAGACCACAAATTTCAGCAGCTGTA CACCGAGGAAACGACAACAGGCAACCAATGGCAACGAAGTAGTGCGTAAA CGTGCGACGGGACCAAGGCGGATGCGTTTCTAGACCGGACAGATATTTAA ACAGCTATAGTCCCTAGTTGCTTTTCCAAATTTACGTAGCACAATTATTT TCTTTGGCTTTCGAGGATACCCGACAAATTTCCGTAATTATTTGAACAAG ACTGATTGCACCCGCTTTGGTTCCGCTTCCTGGGACCCCGCGTCGCGCTA GGCTAAACTACAATATGTATTGTTTTACATAATCCCCTGTATTTATTTGT GTATTAAAGTTCAATGTTTATTTAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 5927985..5929210 | 98..1323 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rux-RA | 1..1008 | 76..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rux-RA | 1..1008 | 76..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rux-RA | 1..1008 | 76..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rux-RA | 1..1008 | 76..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rux-RA | 1..1008 | 76..1083 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rux-RA | 12..1334 | 1..1323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rux-RA | 12..1334 | 1..1323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rux-RA | 98..1420 | 1..1323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rux-RA | 12..1334 | 1..1323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rux-RA | 98..1420 | 1..1323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6035753..6036978 | 98..1323 | 100 | <- | Minus |
X | 6037069..6037165 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6035753..6036978 | 98..1323 | 100 | <- | Minus |
X | 6037069..6037165 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6035753..6036978 | 98..1323 | 100 | <- | Minus |
X | 6037069..6037165 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 5929786..5931011 | 98..1323 | 100 | <- | Minus |
arm_X | 5931102..5931198 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6043851..6045076 | 98..1323 | 100 | <- | Minus |
X | 6045167..6045263 | 1..97 | 100 | Minus |
Translation from 75 to 1082
> GH22074.pep MSAPEEHKETPLEVIHEFINGVDDGTIRRDLGEDCILSFYSRNVRGAKAI TGFLRNQLTMRYKHEGFEEAAQIEWGDELLLKARFGRSFDSERRRIYEEK ERTGTTLHVRPESDDEEVNEKFSSTLITPPRPSSYNLNSLKYVEACGLLN KRNEHIYGGLDMGESCAVHLTLGYRSTFLPGGQVSGFEICLAVYDRGLTS LKRSTLIPPLCSISFARRASARCNPTTDDEEDTEEDSTPPTARRCVRRTL FTEENTQKEEDADFIPVVEQEQPAPQEQPAPQQAEETGEVVIPVDISTAL KTTNFSSCTPRKRQQATNGNEVVRKRATGPRRMRF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22065-PA | 405 | GF22065-PA | 41..405 | 10..335 | 584 | 39.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\rux-PA | 339 | GG18457-PA | 1..339 | 1..335 | 1232 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17896-PA | 314 | GH17896-PA | 14..298 | 13..281 | 229 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
rux-PB | 335 | CG4336-PB | 1..335 | 1..335 | 1752 | 100 | Plus |
rux-PA | 335 | CG4336-PA | 1..335 | 1..335 | 1752 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16487-PA | 292 | GI16487-PA | 4..263 | 5..273 | 305 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14959-PA | 339 | GL14959-PA | 17..261 | 13..260 | 384 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18118-PA | 339 | GA18118-PA | 17..261 | 13..260 | 389 | 36.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\rux-PA | 349 | GM12600-PA | 1..349 | 1..335 | 1437 | 83 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\rux-PA | 344 | GD16220-PA | 1..344 | 1..335 | 1423 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16032-PA | 310 | GJ16032-PA | 15..302 | 10..328 | 419 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19724-PA | 318 | GK19724-PA | 22..255 | 5..251 | 474 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\rux-PA | 332 | GE15679-PA | 1..332 | 1..335 | 1246 | 73.1 | Plus |
Translation from 75 to 1082
> GH22074.hyp MSAPEEHKETPLEVIHEFINGVDDGTIRRDLGEDCILSFYSRNVRGAKAI TGFLRNQLTMRYKHEGFEEAAQIEWGDELLLKARFGRSFDSERRRIYEEK ERTGTTLHVRPESDDEEVNEKFSSTLITPPRPSSYNLNSLKYVEACGLLN KRNEHIYGGLDMGESCAVHLTLGYRSTFLPGGQVSGFEICLAVYDRGLTS LKRSTLIPPLCSISFARRASARCNPTTDDEEDTEEDSTPPTARRCVRRTL FTEENTQKEEDADFIPVVEQEQPAPQEQPAPQQAEETGEVVIPVDISTAL KTTNFSSCTPRKRQQATNGNEVVRKRATGPRRMRF*