BDGP Sequence Production Resources |
Search the DGRC for GH22096
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 220 |
Well: | 96 |
Vector: | pOT2 |
Associated Gene/Transcript | CG6984-RA |
Protein status: | GH22096.pep: gold |
Preliminary Size: | 1108 |
Sequenced Size: | 1022 |
Gene | Date | Evidence |
---|---|---|
CG6984 | 2001-01-01 | Release 2 assignment |
CG6984 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6984 | 2003-02-17 | Blastp of sequenced clone |
CG6984 | 2008-04-29 | Release 5.5 accounting |
CG6984 | 2008-08-15 | Release 5.9 accounting |
CG6984 | 2008-12-18 | 5.12 accounting |
1022 bp (1022 high quality bases) assembled on 2003-02-17
GenBank Submission: AY069175
> GH22096.complete AAAATGTTGCGTATTTTAAACAACTCCTTAAAAATATCAAAATATGCAAC AGGTTGCGTGCAACAGGTCATTCGCTTTACCAGCAATGGACCCAGTGATT TGGTCCTGGTCAAGGAGCATAACGGAGTGCGAGAGATAACGCTGAATCAT CCAAAAACTCTGAATTCCCTATCACTGGACATGATGTGTGCCCTTCAGGA CGCCCTGCTAAAAGATAAAGACAACTTGGATCTGAGATGCGTGGTCCTGA CGGCCCAAGGAAAGATCTGGTCGGCAGGTCACAATCTCAAGGAGTTGCAC AATGACCCCAAGATACAGGCTTGTGTGTTCCAGAAGCTAACCGATGTTAT AAACGACATCCAAAGACTGCCGGTGCCCGTACTAGGAAAAGTCAATGGCT ATGCGGCTGCTGCAGGCTGCCAACTGGTGGTGTCATGTGACATGGTAGTC TGCACCAAGAACAGCAAGTTCTCTACTCCAGGGGCTGGAGTCGGAGTTTT TTGCTCAACACCCGGAGTCGCAGTTGCCCGGATTATGTCGCGTCCAAAGT CCGCCTATATGCTAATGACCGGTCTTCCCGTTACTGGTGAAGAAGCCTAC ATATCGGGAATGGTCACCAAAGCTGTTCCTGCAGAGGAACTAGATAAGGA GATCGAGGAAATCACCAATGCCATAAAGGCAAAAAGTCGTGCCGTCATCT CTCTGGGAAAAGAGTTCTACTACAAGCAACTGGCCATGTCCCAAGCGGAA GCCTTTTCGGCTGCGCAGGAGAAGATGTGCGAAAATTTCCAGCTGGGCGA CACCAAAGAGGGCATTGCTAGCTTCTTCGAGAAGCGCCCACCCAACTGGA AGCACCAGTAACCGCAACATACAATATGAAATAATGAATCAAAACTGACC AATTGTGCATTTATACTTTTAAGCTTGAATTGTCCAAAGTGACTTAAAAG AATGTTAATTTGAAATGTTATTTTTTTAAACGTTTATAAAACAATGTTGA ACACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6984-RA | 1116 | CG6984-RA | 54..1059 | 1..1006 | 5030 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12979215..12979696 | 1..482 | 99 | -> | Plus |
chr2R | 12979754..12980277 | 483..1004 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6984-RA | 1..858 | 4..861 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6984-RA | 1..858 | 4..861 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6984-RA | 1..858 | 4..861 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6984-RA | 1..858 | 4..861 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6984-RA | 1..858 | 4..861 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6984-RA | 1..1004 | 1..1004 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6984-RA | 1..1004 | 1..1004 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6984-RA | 27..1030 | 1..1004 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6984-RA | 1..1004 | 1..1004 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6984-RA | 27..1030 | 1..1004 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17092010..17092491 | 1..482 | 100 | -> | Plus |
2R | 17092549..17093070 | 483..1004 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17092010..17092491 | 1..482 | 100 | -> | Plus |
2R | 17092549..17093070 | 483..1004 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17092010..17092491 | 1..482 | 100 | -> | Plus |
2R | 17092549..17093070 | 483..1004 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12979515..12979996 | 1..482 | 100 | -> | Plus |
arm_2R | 12980054..12980575 | 483..1004 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17093209..17093690 | 1..482 | 100 | -> | Plus |
2R | 17093748..17094269 | 483..1004 | 100 | Plus |
Translation from 0 to 860
> GH22096.hyp KMLRILNNSLKISKYATGCVQQVIRFTSNGPSDLVLVKEHNGVREITLNH PKTLNSLSLDMMCALQDALLKDKDNLDLRCVVLTAQGKIWSAGHNLKELH NDPKIQACVFQKLTDVINDIQRLPVPVLGKVNGYAAAAGCQLVVSCDMVV CTKNSKFSTPGAGVGVFCSTPGVAVARIMSRPKSAYMLMTGLPVTGEEAY ISGMVTKAVPAEELDKEIEEITNAIKAKSRAVISLGKEFYYKQLAMSQAE AFSAAQEKMCENFQLGDTKEGIASFFEKRPPNWKHQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6984-PA | 285 | CG6984-PA | 1..285 | 2..286 | 1467 | 100 | Plus |
CG6543-PA | 295 | CG6543-PA | 48..295 | 39..286 | 297 | 28.9 | Plus |
CG6543-PB | 295 | CG6543-PB | 48..295 | 39..286 | 297 | 28.9 | Plus |
CG8778-PA | 299 | CG8778-PA | 32..297 | 30..284 | 185 | 26.3 | Plus |
Translation from 3 to 860
> GH22096.pep MLRILNNSLKISKYATGCVQQVIRFTSNGPSDLVLVKEHNGVREITLNHP KTLNSLSLDMMCALQDALLKDKDNLDLRCVVLTAQGKIWSAGHNLKELHN DPKIQACVFQKLTDVINDIQRLPVPVLGKVNGYAAAAGCQLVVSCDMVVC TKNSKFSTPGAGVGVFCSTPGVAVARIMSRPKSAYMLMTGLPVTGEEAYI SGMVTKAVPAEELDKEIEEITNAIKAKSRAVISLGKEFYYKQLAMSQAEA FSAAQEKMCENFQLGDTKEGIASFFEKRPPNWKHQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11437-PA | 280 | GF11437-PA | 3..280 | 5..285 | 1305 | 85.8 | Plus |
Dana\GF11161-PA | 293 | GF11161-PA | 24..293 | 20..285 | 295 | 28.8 | Plus |
Dana\GF11465-PA | 299 | GF11465-PA | 32..299 | 29..285 | 181 | 26.1 | Plus |
Dana\GF24414-PA | 260 | GF24414-PA | 9..257 | 34..278 | 154 | 21.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20659-PA | 285 | GG20659-PA | 1..284 | 1..284 | 1467 | 95.4 | Plus |
Dere\GG22466-PA | 294 | GG22466-PA | 24..294 | 20..285 | 304 | 28.3 | Plus |
Dere\GG22562-PA | 299 | GG22562-PA | 32..299 | 29..285 | 177 | 26.1 | Plus |
Dere\GG10065-PA | 280 | GG10065-PA | 28..207 | 34..212 | 146 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21008-PA | 274 | GH21008-PA | 18..273 | 23..284 | 872 | 64.6 | Plus |
Dgri\GH20865-PA | 293 | GH20865-PA | 24..293 | 20..285 | 304 | 28.4 | Plus |
Dgri\GH22640-PA | 298 | GH22640-PA | 31..298 | 29..285 | 170 | 24.8 | Plus |
Dgri\GH12615-PA | 294 | GH12615-PA | 34..213 | 42..206 | 145 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6984-PA | 285 | CG6984-PA | 1..285 | 1..285 | 1467 | 100 | Plus |
Echs1-PA | 295 | CG6543-PA | 48..295 | 38..285 | 297 | 28.9 | Plus |
Echs1-PB | 295 | CG6543-PB | 48..295 | 38..285 | 297 | 28.9 | Plus |
CG8778-PA | 299 | CG8778-PA | 32..297 | 29..283 | 185 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18602-PA | 283 | GI18602-PA | 1..281 | 1..284 | 963 | 63.3 | Plus |
Dmoj\GI20973-PA | 293 | GI20973-PA | 24..293 | 20..285 | 321 | 29.5 | Plus |
Dmoj\GI21154-PA | 301 | GI21154-PA | 20..301 | 13..285 | 162 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17233-PA | 225 | GL17233-PA | 1..225 | 61..285 | 962 | 78.7 | Plus |
Dper\GL16995-PA | 296 | GL16995-PA | 74..296 | 63..285 | 251 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20005-PB | 285 | GA20005-PB | 1..285 | 1..285 | 1126 | 74.2 | Plus |
Dpse\GA19673-PB | 296 | GA19673-PB | 49..296 | 38..285 | 301 | 29.3 | Plus |
Dpse\GA19673-PA | 296 | GA19673-PA | 49..296 | 38..285 | 301 | 29.3 | Plus |
Dpse\GA21314-PA | 298 | GA21314-PA | 45..298 | 39..285 | 155 | 23.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21756-PA | 285 | GM21756-PA | 1..285 | 1..285 | 1479 | 96.8 | Plus |
Dsec\GM20252-PA | 294 | GM20252-PA | 24..294 | 20..285 | 303 | 28.3 | Plus |
Dsec\GM17776-PA | 280 | GM17776-PA | 28..207 | 34..212 | 147 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11247-PA | 226 | GD11247-PA | 1..226 | 60..285 | 1195 | 98.2 | Plus |
Dsim\GD25738-PA | 294 | GD25738-PA | 24..294 | 20..285 | 303 | 28.3 | Plus |
Dsim\GD25824-PA | 299 | GD25824-PA | 6..299 | 13..285 | 178 | 25.9 | Plus |
Dsim\GD13579-PA | 262 | GD13579-PA | 9..196 | 34..217 | 152 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21618-PA | 254 | GJ21618-PA | 3..252 | 36..284 | 880 | 67.2 | Plus |
Dvir\GJ20693-PA | 293 | GJ20693-PA | 24..293 | 20..285 | 301 | 28.7 | Plus |
Dvir\GJ21004-PA | 281 | GJ21004-PA | 28..281 | 39..285 | 158 | 23.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17869-PA | 283 | GK17869-PA | 1..282 | 1..285 | 949 | 63.5 | Plus |
Dwil\GK17937-PA | 295 | GK17937-PA | 48..295 | 38..285 | 304 | 29.3 | Plus |
Dwil\GK15915-PA | 302 | GK15915-PA | 33..302 | 27..285 | 166 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11645-PA | 285 | GE11645-PA | 1..284 | 1..284 | 1490 | 97.2 | Plus |
Dyak\GE13337-PA | 294 | GE13337-PA | 24..294 | 20..285 | 304 | 28.3 | Plus |
Dyak\GE13432-PA | 299 | GE13432-PA | 32..299 | 29..285 | 175 | 26.1 | Plus |