BDGP Sequence Production Resources |
Search the DGRC for GH22106
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 221 |
Well: | 6 |
Vector: | pOT2 |
Associated Gene/Transcript | jdp-RA |
Protein status: | GH22106.pep: gold |
Preliminary Size: | 2014 |
Sequenced Size: | 1974 |
Gene | Date | Evidence |
---|---|---|
CG2239 | 2001-01-01 | Release 2 assignment |
CG2239 | 2001-09-19 | Blastp of sequenced clone |
CG2239 | 2003-01-01 | Sim4 clustering to Release 3 |
jdp | 2008-04-29 | Release 5.5 accounting |
jdp | 2008-08-15 | Release 5.9 accounting |
jdp | 2008-12-18 | 5.12 accounting |
1974 bp (1974 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060331
> GH22106.complete AACATCGTGAGCGCCGCTTATCCCAAAAAAAACATATATAAATTCCCGAC CGATCCCAGGAATAACTGACGCAATGAGCGCCGTTGATGCTATAATCAAT TACAAGCGCAGTCCCAACGAGGACTTCTACGGTCTGCTCCATTGCGATGA GAACTCATCGCCCGAGCAGATCCAGGCCGAGTACAAAGTCCTGGCCCTTC AGTACCATCCCGACAAGAACTCCGGCGACAAGGAGGCGGAGGCCAAGTTC CAGCAGTTAAAGGAGGCCAAGGAAACCTTGTGCGATCCCGAAAAGAGGGC CATCTACGACAAGTGGCGCAACAGCGGCATCTCGATGAGCTACAAACAGT GGCTGGGCATGAAGGAGCATGTCGGTCAGGTGAGAAGATACACGATTGCC GAGAAAGTGGATAAAGAGTCCATGCACTGGGTAACACCCAAGACCAAGGA TCGCATGCTGCCCGAGACCGGTGGAGCAGCTGCCCAGGGACCTGGAACCG GTGCAGGATGCAGCAGCGGTGGCCTGACCGCAGCATCCCCCAATCCCGCC CACCGGCGGGCCTCGGAGGGCGGGGCGGCCTTGTACTACGGGAGTCGCAA GGGCGAGTGGGGCGGCGAGAACACCGATGTGGCCAACAAGTTCCGCAACT ACGAGATCTAAGAGGGTCGTCGGCCACATATAGATGTTTCAATTTTAAAA ATATTTCAAGTCAAACCGATGAGCGAGCAGGAGGAGTTGGGTGTCTATCC CGAAAGTTATGCAATTATATCAAAATATTCTGAAAGGGAAACAAAGTTTA TTATCGATGTGTAACTTAAGCGTTGCGAACCACAGAGCACAGATACTCTT ATATAGATGTTTATAGGTGTACAAATAAAAAATATATAGAAAAATGGTAA TTAACTAACGTATATTTAAGTGAAAGAAACTGTAATTTCAATAAACTCCC CCGATGAAAAATCCCAGGCGGAGCGGCAAGAATTTTAAGTTGAAGTAATT AGTCAAATTTTATCGCAGTCATGCATATATGAATATACACACCATATACT ATATATATATTTATGTAATCAGTGTATTTGTATATCGATGTTTCAAGTAC CATGAATGTACCAAGACAATCCCTTGGCAGCAAACAAAACTAAACTAAAG CTAATGCTAAAGCTGTAACTGAAACTAAACTATTACTTAACTGGTGACAG TCTAGCGATTCACCCACCACGAGCCAGAAAATGAGAACATATTGAAAGAC ATGGCAAAGCGAATTTAAACCTCTATACACACGACACATTTGCATAGTCA AAAAAAGTAAATCTCACTCGGTGTCCTTTTTAAATGCAACATTGCGAAAA GCTCCACTGAACTGTTTTCCCTACCTGAAAAATCATTTTCGCAGAAAATC AACAAAAAAAAAAAAAAATGTGACAAAATATCAAAGAAAAATCAAACAAA AAAAAAAGTGCAGAGTTTATATAAATGTTTTGATGGATAGAGCGGTGAAC TTTTCAACTTATACATATAGCAGAGATTATTGTCATTATTATTGTACTAT TATGCGCAGCGCAGAGAAATAATTACTACATAAATGTTGTTGCTGGATTT AAATGCATTACTTATACAACTACATATGAAAATTGTTTTAAGACATACTC TATTGAATTTATTCAAATACACACATATTGCGGATAGAGCAGACCAGATC CAGATCAAATCGGAACAGAAAGGGAGGAACAGCTGCAAGCCAAAGGCGTG ACCCCGCGACCCCCGACCCCTTAGAAGGGGCGGTGGGCGGGGCTCCAGCT AGTACTAGCAATTACACATTAATTAGTGTTGGTTCTAACTTAGCTGGCGA ATGTTACACGCAGCGAGCGATCAGATCACAAATAAATCAAATTTTTGAAA GGGGTTCCCACTCCTGGCGGAACCTCAGGTATTCAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
jdp-RA | 2028 | jdp-RA | 54..1988 | 1..1936 | 9640 | 99.9 | Plus |
jdp.a | 1937 | jdp.a | 57..1932 | 60..1936 | 9345 | 99.9 | Plus |
jdp-RB | 1989 | jdp-RB | 431..1949 | 417..1936 | 7560 | 99.9 | Plus |
jdp-RB | 1989 | jdp-RB | 54..432 | 1..379 | 1895 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 26339572..26341088 | 1934..417 | 7495 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 26342121..26342278 | 418..261 | 790 | 100 | Minus |
chr3R | 27901430 | chr3R | 26348762..26348894 | 160..28 | 665 | 100 | Minus |
chr3R | 27901430 | chr3R | 26345745..26345848 | 263..160 | 520 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 30517057..30518575 | 1936..417 | 7550 | 99.9 | Minus |
3R | 32079331 | 3R | 30519608..30519765 | 418..261 | 790 | 100 | Minus |
3R | 32079331 | 3R | 30526243..30526375 | 160..28 | 665 | 100 | Minus |
3R | 32079331 | 3R | 30523227..30523330 | 263..160 | 520 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 30257888..30259406 | 1936..417 | 7560 | 99.9 | Minus |
3R | 31820162 | 3R | 30260439..30260596 | 418..261 | 790 | 100 | Minus |
3R | 31820162 | 3R | 30267074..30267206 | 160..28 | 665 | 100 | Minus |
3R | 31820162 | 3R | 30264058..30264161 | 263..160 | 520 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 3798..3957 | 763..918 | 123 | 58.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 26339572..26340048 | 1458..1934 | 99 | == | Minus |
chr3R | 26340113..26341086 | 419..1392 | 99 | <- | Minus |
chr3R | 26342121..26342276 | 263..418 | 100 | <- | Minus |
chr3R | 26345746..26345847 | 161..262 | 100 | <- | Minus |
chr3R | 26348762..26348894 | 28..160 | 100 | <- | Minus |
chr3R | 26349500..26349526 | 1..27 | 92 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jdp-RA | 1..588 | 74..661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jdp-RA | 1..588 | 74..661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jdp-RA | 1..588 | 74..661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jdp-RA | 1..588 | 74..661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jdp-RA | 1..588 | 74..661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jdp-RA | 30..1962 | 1..1934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jdp-RA | 30..1962 | 1..1934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jdp-RA | 28..1960 | 1..1934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jdp-RA | 30..1962 | 1..1934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
jdp-RA | 28..1960 | 1..1934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30519608..30519763 | 263..418 | 100 | <- | Minus |
3R | 30523228..30523329 | 161..262 | 100 | <- | Minus |
3R | 30526243..30526375 | 28..160 | 100 | <- | Minus |
3R | 30526984..30527010 | 1..27 | 100 | Minus | |
3R | 30517059..30518573 | 419..1934 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30519608..30519763 | 263..418 | 100 | <- | Minus |
3R | 30523228..30523329 | 161..262 | 100 | <- | Minus |
3R | 30526243..30526375 | 28..160 | 100 | <- | Minus |
3R | 30526984..30527010 | 1..27 | 100 | Minus | |
3R | 30517059..30518573 | 419..1934 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30519608..30519763 | 263..418 | 100 | <- | Minus |
3R | 30523228..30523329 | 161..262 | 100 | <- | Minus |
3R | 30526243..30526375 | 28..160 | 100 | <- | Minus |
3R | 30526984..30527010 | 1..27 | 100 | Minus | |
3R | 30517059..30518573 | 419..1934 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 26342781..26344295 | 419..1934 | 99 | <- | Minus |
arm_3R | 26345330..26345485 | 263..418 | 100 | <- | Minus |
arm_3R | 26348950..26349051 | 161..262 | 100 | <- | Minus |
arm_3R | 26351965..26352097 | 28..160 | 100 | <- | Minus |
arm_3R | 26352706..26352732 | 1..27 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30257890..30259404 | 419..1934 | 99 | <- | Minus |
3R | 30260439..30260594 | 263..418 | 100 | <- | Minus |
3R | 30264059..30264160 | 161..262 | 100 | <- | Minus |
3R | 30267074..30267206 | 28..160 | 100 | <- | Minus |
3R | 30267815..30267841 | 1..27 | 100 | Minus |
Translation from 73 to 660
> GH22106.pep MSAVDAIINYKRSPNEDFYGLLHCDENSSPEQIQAEYKVLALQYHPDKNS GDKEAEAKFQQLKEAKETLCDPEKRAIYDKWRNSGISMSYKQWLGMKEHV GQVRRYTIAEKVDKESMHWVTPKTKDRMLPETGGAAAQGPGTGAGCSSGG LTAASPNPAHRRASEGGAALYYGSRKGEWGGENTDVANKFRNYEI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23324-PA | 195 | GF23324-PA | 1..195 | 1..195 | 923 | 95.4 | Plus |
Dana\GF10450-PA | 354 | GF10450-PA | 3..72 | 16..86 | 159 | 43.7 | Plus |
Dana\GF15175-PA | 346 | GF15175-PA | 3..72 | 16..86 | 146 | 42.3 | Plus |
Dana\GF19555-PA | 334 | GF19555-PA | 3..72 | 16..86 | 143 | 39.4 | Plus |
Dana\GF23490-PA | 130 | GF23490-PA | 4..72 | 17..86 | 138 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11926-PA | 184 | GG11926-PA | 1..184 | 1..195 | 939 | 91.4 | Plus |
Dere\DnaJ-1-PA | 351 | GG14117-PA | 3..72 | 16..86 | 154 | 42.3 | Plus |
Dere\GG23080-PA | 874 | GG23080-PA | 26..123 | 13..114 | 143 | 32.4 | Plus |
Dere\GG13187-PA | 127 | GG13187-PA | 4..72 | 17..86 | 142 | 41.4 | Plus |
Dere\GG24779-PA | 350 | GG24779-PA | 3..72 | 16..86 | 142 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17424-PA | 191 | GH17424-PA | 1..191 | 1..195 | 869 | 90.3 | Plus |
Dgri\GH15011-PA | 353 | GH15011-PA | 3..72 | 16..86 | 153 | 40.8 | Plus |
Dgri\GH11404-PA | 346 | GH11404-PA | 3..72 | 16..86 | 142 | 39.4 | Plus |
Dgri\GH11226-PA | 355 | GH11226-PA | 25..88 | 17..80 | 141 | 43.8 | Plus |
Dgri\GH16902-PA | 127 | GH16902-PA | 3..72 | 16..86 | 136 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
jdp-PA | 195 | CG2239-PA | 1..195 | 1..195 | 1047 | 100 | Plus |
jdp-PB | 182 | CG2239-PB | 1..182 | 1..195 | 959 | 93.3 | Plus |
jdp-PC | 170 | CG2239-PC | 1..115 | 1..115 | 611 | 100 | Plus |
DnaJ-1-PA | 334 | CG10578-PA | 3..72 | 16..86 | 152 | 40.8 | Plus |
DnaJ-1-PB | 334 | CG10578-PB | 3..72 | 16..86 | 152 | 40.8 | Plus |
CG5001-PC | 346 | CG5001-PC | 3..72 | 16..86 | 151 | 40.8 | Plus |
CG5001-PD | 350 | CG5001-PD | 3..72 | 16..86 | 151 | 40.8 | Plus |
CG5001-PA | 350 | CG5001-PA | 3..72 | 16..86 | 151 | 40.8 | Plus |
CG5001-PB | 350 | CG5001-PB | 3..72 | 16..86 | 151 | 40.8 | Plus |
shv-PA | 354 | CG4164-PA | 25..104 | 17..101 | 150 | 36.5 | Plus |
CG7130-PA | 128 | CG7130-PA | 3..72 | 16..86 | 145 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22753-PA | 192 | GI22753-PA | 1..192 | 1..195 | 933 | 90.8 | Plus |
Dmoj\GI13174-PA | 352 | GI13174-PA | 3..72 | 16..86 | 155 | 42.3 | Plus |
Dmoj\GI21690-PA | 355 | GI21690-PA | 25..88 | 17..80 | 152 | 45.3 | Plus |
Dmoj\GI15199-PA | 325 | GI15199-PA | 3..72 | 16..86 | 150 | 43.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14039-PA | 177 | GL14039-PA | 6..177 | 28..195 | 742 | 89 | Plus |
Dper\GL20776-PA | 230 | GL20776-PA | 3..72 | 16..86 | 153 | 40.8 | Plus |
Dper\GL15626-PA | 318 | GL15626-PA | 3..72 | 16..86 | 146 | 42.3 | Plus |
Dper\GL25452-PA | 129 | GL25452-PA | 3..72 | 16..86 | 136 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15317-PA | 199 | GA15317-PA | 1..199 | 1..195 | 896 | 91 | Plus |
Dpse\GA15317-PB | 186 | GA15317-PB | 1..186 | 1..195 | 805 | 84.4 | Plus |
Dpse\GA15317-PC | 182 | GA15317-PC | 1..119 | 1..119 | 609 | 94.1 | Plus |
Dpse\GA10408-PA | 353 | GA10408-PA | 3..72 | 16..86 | 152 | 40.8 | Plus |
Dpse\GA18584-PA | 346 | GA18584-PA | 3..72 | 16..86 | 146 | 42.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12145-PA | 182 | GM12145-PA | 1..182 | 1..195 | 952 | 92.3 | Plus |
Dsec\GM16265-PA | 72 | GM16265-PA | 1..72 | 124..195 | 361 | 97.2 | Plus |
Dsec\DnaJ-1-PA | 337 | GM13903-PA | 3..72 | 16..86 | 154 | 43.7 | Plus |
Dsec\GM16806-PA | 350 | GM16806-PA | 3..72 | 16..86 | 146 | 40.8 | Plus |
Dsec\GM22099-PA | 128 | GM22099-PA | 4..72 | 17..86 | 139 | 41.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16969-PA | 182 | GD16969-PA | 1..182 | 1..195 | 956 | 92.8 | Plus |
Dsim\DnaJ-1-PA | 352 | GD13179-PA | 3..72 | 16..86 | 159 | 43.7 | Plus |
Dsim\GD23083-PA | 346 | GD23083-PA | 3..72 | 16..86 | 146 | 40.8 | Plus |
Dsim\GD12075-PA | 128 | GD12075-PA | 4..72 | 17..86 | 139 | 41.4 | Plus |
Dsim\GD17107-PA | 143 | GD17107-PA | 3..65 | 16..79 | 134 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22754-PA | 192 | GJ22754-PA | 1..192 | 1..195 | 948 | 90.8 | Plus |
Dvir\GJ14805-PA | 325 | GJ14805-PA | 3..72 | 16..86 | 148 | 43.7 | Plus |
Dvir\GJ11949-PA | 351 | GJ11949-PA | 3..66 | 16..80 | 147 | 44.6 | Plus |
Dvir\GJ16971-PA | 347 | GJ16971-PA | 3..72 | 16..86 | 144 | 42.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13121-PA | 193 | GK13121-PA | 1..193 | 1..195 | 909 | 89.3 | Plus |
Dwil\GK19161-PA | 125 | GK19161-PA | 4..79 | 17..93 | 154 | 39 | Plus |
Dwil\GK16875-PA | 356 | GK16875-PA | 3..73 | 16..87 | 152 | 40.3 | Plus |
Dwil\GK15183-PA | 346 | GK15183-PA | 3..72 | 16..86 | 146 | 42.3 | Plus |
Dwil\GK19767-PA | 330 | GK19767-PA | 3..72 | 16..86 | 144 | 40.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23376-PA | 182 | GE23376-PA | 1..182 | 1..195 | 948 | 91.8 | Plus |
Dyak\DnaJ-1-PA | 351 | GE20542-PA | 3..72 | 16..86 | 154 | 42.3 | Plus |
Dyak\GE22992-PA | 127 | GE22992-PA | 3..72 | 16..86 | 144 | 40.8 | Plus |
Dyak\GE19512-PA | 127 | GE19512-PA | 3..72 | 16..86 | 144 | 40.8 | Plus |
Dyak\GE17451-PA | 350 | GE17451-PA | 3..72 | 16..86 | 142 | 40.8 | Plus |
Translation from 73 to 660
> GH22106.hyp MSAVDAIINYKRSPNEDFYGLLHCDENSSPEQIQAEYKVLALQYHPDKNS GDKEAEAKFQQLKEAKETLCDPEKRAIYDKWRNSGISMSYKQWLGMKEHV GQVRRYTIAEKVDKESMHWVTPKTKDRMLPETGGAAAQGPGTGAGCSSGG LTAASPNPAHRRASEGGAALYYGSRKGEWGGENTDVANKFRNYEI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
jdp-PA | 195 | CG2239-PA | 1..195 | 1..195 | 1047 | 100 | Plus |
jdp-PB | 182 | CG2239-PB | 1..182 | 1..195 | 959 | 93.3 | Plus |
jdp-PC | 170 | CG2239-PC | 1..115 | 1..115 | 611 | 100 | Plus |
DnaJ-1-PA | 334 | CG10578-PA | 3..72 | 16..86 | 152 | 40.8 | Plus |
CG7130-PA | 128 | CG7130-PA | 3..72 | 16..86 | 145 | 40.8 | Plus |