BDGP Sequence Production Resources |
Search the DGRC for GH22160
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 221 |
Well: | 60 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5805-RA |
Protein status: | GH22160.pep: gold |
Preliminary Size: | 2065 |
Sequenced Size: | 1981 |
Gene | Date | Evidence |
---|---|---|
CG5805 | 2001-01-01 | Release 2 assignment |
CG5805 | 2001-07-04 | Blastp of sequenced clone |
CG5805 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5805 | 2008-04-29 | Release 5.5 accounting |
CG5805 | 2008-08-15 | Release 5.9 accounting |
CG5805 | 2008-12-18 | 5.12 accounting |
1981 bp (1981 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051574
> GH22160.complete TGATATGCACAAGGCAAATATCCAAACAGACACAGTGGCGTAGATATACA TATATGCATATGTTAATACACGGCAACAATAAGCGCAGCACACAAAGGAA CCGATCAAGAGTCATGCAGGTCGAATGCCTCCAGAGACATCAGCAGCATA CCCGGCTGTGAAGGAAGCCCCTATCGCCTCGAAGCTTCCACGCATGCGAA CAATCCTTTGCGGACGCACTGAGTCCACCAGGAGTCGTTGGAGCAGCCGC AACCCCGTCGTCCGGTAGCAGCGATGACGGAAAGCAGCAGTAGCACCAAA TCCCGCCTAGCGGTGGCGCCCACCGGAGTTGGAGGAGCAGCCGAGGGAGC CACATACATACGCACCATCGAATGGGACATGATGAACAAGACCAAGTTCT TTCCGCTCTCCATGCTCAGCTCGTTTTCGGTGCGCTGCTGCCTATTCCCG CTGACCGTGATCAAGACGCAATTGCAGGTGCAGCACAAGAGCGATGTGTA CAAGGGCATGGTGGATTGCGCCATGAAGATCTACCGATCGGAGGGAGTGC CCGGTCTGTATAGAGGTTTCTGGATCTCCTCCGTGCAAATAGTGTCCGGC GTCTTTTACATAAGCACCTACGAGGGCGTGCGCCATGTGCTCAACGATCT GGGTGCTGGGCATCGAATGAAGGCCCTCGCCGGCGGCGGTTGCGCCTCGC TGGTGGGCCAGACCATCATAGTTCCTTTCGATGTGATATCGCAGCACGCC ATGGTGCTCGGGATGTCGGCCCATGCCGGTTCCAAGGGCGATATCAATCC GCTGGGCATTAAGTCATGGCCCGGTCGCAGTCGCCTGCACATTTCCATGG ACATTGGCAGGGAGATAATGCGGCGCGATGGCTTCCGGGGCTTCTACCGC GGCTACACCGCCAGCCTGATGGCCTACGTACCGAATTCGGCCATGTGGTG GGCCTTCTATCATCTCTATCAGGACGAACTGTTCCGCATCTGCCCCGTTT GGGTGTCCCATCTGTTTATCCAGTGCGTGGCCGGCAGTTTAGGTGGCTTC ACAACGACAATACTAACCAATCCTTTAGATATAGTGCGTGCCCGTCTGCA GGTCCACCGCTTGGACTCGATGAGCGTCGCCTTCCGGGAGCTGTGGCAGG AGGAGAAGCTGAACTGCTTCTTCAAGGGACTGTCCGCCCGCCTGGTGCAG TCGGCAGCCTTCTCATTCAGCATTATTCTAGGTTACGAGACGATCAAGCG CATTGCGGTGGACGAGCAGTACAAGCATCAGATCCGCTGGTAAAGAACGC ACAATCCCCAGCCAAACGGAAACCAACTCAAAACTGCATTTACGCGACGT ACTGAGAACCACCAGAACTGGAGGAGATTCGCCCCCGATTGTAAATAACA AGAGCTAGAGAATGAATTAGAGGAGCACAAGTTAATTAGTTGAATTGCCG ACGATAGCGAATTATAAATCATCGATGGCGGACGCATCGAGGATGTATTG TAGTAGAATGTTGCAACATACTTGCGGCTAGGATGTTCAAGTAACGCAAT TCAATATGCAAATACCCCAAAGTGTTGTAGCTTAAAGTGTACATTATTTT TGTTATACTTAGTCGTTTTATACCTAACACGCGAAGAGGCCGATCGGTGA CAAGCATAATTTATTATACACCTAACTAAACTTGTACGTGTACGTGTAAT TGATGATGATGTTGATAATACTGTTGATTACATTGGTAGCCCAATTACTT TTACACAACTAAGCACAGCAATGTTTGCGCCAAACAAAATACCACAAACT GGACATGCCGAATTAGAAATTAATATCGAAACAGGGTCGCCCCTCCCCAG AGGTCGGGAGGCACTACACTTAGCTAAGCATTCGTGTGTGTGTGTTCTCT GAGTGGATAAACTAGTTTTAGTCTGCATTATAATAAAGTACAAACCAAGA ATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5805-RA | 2203 | CG5805-RA | 89..2040 | 1..1952 | 9760 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 20609175..20610100 | 973..42 | 4430 | 98.6 | Minus |
chr3R | 27901430 | chr3R | 20607939..20608793 | 1952..1098 | 4260 | 99.9 | Minus |
chr3R | 27901430 | chr3R | 20608987..20609117 | 1103..973 | 655 | 100 | Minus |
chr3R | 27901430 | chr3R | 20610495..20610537 | 43..1 | 215 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24785973..24786904 | 973..42 | 4660 | 100 | Minus |
3R | 32079331 | 3R | 24784737..24785591 | 1952..1098 | 4275 | 100 | Minus |
3R | 32079331 | 3R | 24785785..24785915 | 1103..973 | 655 | 100 | Minus |
3R | 32079331 | 3R | 24787295..24787337 | 43..1 | 215 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24526804..24527735 | 973..42 | 4660 | 100 | Minus |
3R | 31820162 | 3R | 24525568..24526422 | 1952..1098 | 4275 | 100 | Minus |
3R | 31820162 | 3R | 24526616..24526746 | 1103..973 | 655 | 100 | Minus |
3R | 31820162 | 3R | 24528126..24528168 | 43..1 | 215 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20609175..20610098 | 44..973 | 98 | <- | Minus |
chr3R | 20610495..20610537 | 1..43 | 100 | Minus | |
chr3R | 20607939..20608789 | 1102..1952 | 99 | <- | Minus |
chr3R | 20608989..20609116 | 974..1101 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5805-RA | 1..1020 | 274..1293 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5805-RA | 1..1020 | 274..1293 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5805-RA | 1..1020 | 274..1293 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5805-RA | 1..1020 | 274..1293 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5805-RA | 1..1020 | 274..1293 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5805-RA | 84..2035 | 1..1952 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5805-RA | 94..2045 | 1..1952 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5805-RA | 85..2036 | 1..1952 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5805-RA | 84..2035 | 1..1952 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5805-RA | 85..2036 | 1..1952 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24784737..24785587 | 1102..1952 | 100 | <- | Minus |
3R | 24785787..24785914 | 974..1101 | 100 | <- | Minus |
3R | 24785973..24786902 | 44..973 | 100 | <- | Minus |
3R | 24787295..24787337 | 1..43 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24784737..24785587 | 1102..1952 | 100 | <- | Minus |
3R | 24785787..24785914 | 974..1101 | 100 | <- | Minus |
3R | 24785973..24786902 | 44..973 | 100 | <- | Minus |
3R | 24787295..24787337 | 1..43 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24784737..24785587 | 1102..1952 | 100 | <- | Minus |
3R | 24785787..24785914 | 974..1101 | 100 | <- | Minus |
3R | 24785973..24786902 | 44..973 | 100 | <- | Minus |
3R | 24787295..24787337 | 1..43 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20610459..20611309 | 1102..1952 | 100 | <- | Minus |
arm_3R | 20611509..20611636 | 974..1101 | 100 | <- | Minus |
arm_3R | 20611695..20612624 | 44..973 | 100 | <- | Minus |
arm_3R | 20613017..20613059 | 1..43 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24526618..24526745 | 974..1101 | 100 | <- | Minus |
3R | 24525568..24526418 | 1102..1952 | 100 | <- | Minus |
3R | 24526804..24527733 | 44..973 | 100 | <- | Minus |
3R | 24528126..24528168 | 1..43 | 100 | Minus |
Translation from 273 to 1292
> GH22160.hyp MTESSSSTKSRLAVAPTGVGGAAEGATYIRTIEWDMMNKTKFFPLSMLSS FSVRCCLFPLTVIKTQLQVQHKSDVYKGMVDCAMKIYRSEGVPGLYRGFW ISSVQIVSGVFYISTYEGVRHVLNDLGAGHRMKALAGGGCASLVGQTIIV PFDVISQHAMVLGMSAHAGSKGDINPLGIKSWPGRSRLHISMDIGREIMR RDGFRGFYRGYTASLMAYVPNSAMWWAFYHLYQDELFRICPVWVSHLFIQ CVAGSLGGFTTTILTNPLDIVRARLQVHRLDSMSVAFRELWQEEKLNCFF KGLSARLVQSAAFSFSIILGYETIKRIAVDEQYKHQIRW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5805-PB | 339 | CG5805-PB | 1..339 | 1..339 | 1779 | 100 | Plus |
CG5805-PA | 339 | CG5805-PA | 1..339 | 1..339 | 1779 | 100 | Plus |
aralar1-PB | 679 | CG2139-PB | 344..603 | 57..327 | 188 | 23.7 | Plus |
aralar1-PD | 682 | CG2139-PD | 347..606 | 57..327 | 188 | 23.7 | Plus |
aralar1-PA | 682 | CG2139-PA | 347..606 | 57..327 | 188 | 23.7 | Plus |
aralar1-PB | 679 | CG2139-PB | 333..518 | 138..337 | 157 | 27.2 | Plus |
aralar1-PD | 682 | CG2139-PD | 336..521 | 138..337 | 157 | 27.2 | Plus |
Translation from 273 to 1292
> GH22160.pep MTESSSSTKSRLAVAPTGVGGAAEGATYIRTIEWDMMNKTKFFPLSMLSS FSVRCCLFPLTVIKTQLQVQHKSDVYKGMVDCAMKIYRSEGVPGLYRGFW ISSVQIVSGVFYISTYEGVRHVLNDLGAGHRMKALAGGGCASLVGQTIIV PFDVISQHAMVLGMSAHAGSKGDINPLGIKSWPGRSRLHISMDIGREIMR RDGFRGFYRGYTASLMAYVPNSAMWWAFYHLYQDELFRICPVWVSHLFIQ CVAGSLGGFTTTILTNPLDIVRARLQVHRLDSMSVAFRELWQEEKLNCFF KGLSARLVQSAAFSFSIILGYETIKRIAVDEQYKHQIRW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23183-PA | 336 | GF23183-PA | 21..336 | 24..339 | 1644 | 95.9 | Plus |
Dana\GF23336-PA | 693 | GF23336-PA | 358..619 | 55..327 | 187 | 24.5 | Plus |
Dana\GF23042-PA | 317 | GF23042-PA | 34..290 | 56..308 | 169 | 24.2 | Plus |
Dana\GF20265-PA | 299 | GF20265-PA | 4..297 | 33..326 | 160 | 22.1 | Plus |
Dana\GF23043-PA | 312 | GF23043-PA | 31..276 | 56..302 | 160 | 23.9 | Plus |
Dana\GF23336-PA | 693 | GF23336-PA | 349..534 | 138..337 | 156 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12325-PA | 339 | GG12325-PA | 1..339 | 1..339 | 1796 | 98.8 | Plus |
Dere\GG11935-PA | 682 | GG11935-PA | 345..606 | 55..327 | 186 | 24.5 | Plus |
Dere\GG17216-PA | 317 | GG17216-PA | 49..291 | 55..307 | 177 | 24.7 | Plus |
Dere\GG18542-PA | 321 | GG18542-PA | 38..294 | 56..308 | 166 | 23.4 | Plus |
Dere\GG24039-PA | 300 | GG24039-PA | 22..291 | 48..324 | 158 | 23.8 | Plus |
Dere\GG11935-PA | 682 | GG11935-PA | 336..521 | 138..337 | 154 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18467-PA | 340 | GH18467-PA | 2..340 | 5..339 | 1630 | 89.4 | Plus |
Dgri\GH23533-PA | 324 | GH23533-PA | 41..297 | 56..308 | 174 | 24.2 | Plus |
Dgri\GH12090-PA | 299 | GH12090-PA | 4..298 | 33..327 | 170 | 22.8 | Plus |
Dgri\GH17431-PA | 695 | GH17431-PA | 346..619 | 43..327 | 167 | 23.5 | Plus |
Dgri\GH12093-PA | 306 | GH12093-PA | 21..304 | 43..326 | 159 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5805-PB | 339 | CG5805-PB | 1..339 | 1..339 | 1779 | 100 | Plus |
CG5805-PA | 339 | CG5805-PA | 1..339 | 1..339 | 1779 | 100 | Plus |
aralar1-PB | 679 | CG2139-PB | 344..603 | 57..327 | 188 | 23.7 | Plus |
aralar1-PD | 682 | CG2139-PD | 347..606 | 57..327 | 188 | 23.7 | Plus |
aralar1-PA | 682 | CG2139-PA | 347..606 | 57..327 | 188 | 23.7 | Plus |
aralar1-PF | 694 | CG2139-PF | 347..606 | 57..327 | 188 | 23.7 | Plus |
aralar1-PC | 695 | CG2139-PC | 360..619 | 57..327 | 188 | 23.7 | Plus |
aralar1-PE | 707 | CG2139-PE | 372..631 | 57..327 | 188 | 23.7 | Plus |
aralar1-PB | 679 | CG2139-PB | 333..518 | 138..337 | 157 | 27.2 | Plus |
aralar1-PD | 682 | CG2139-PD | 336..521 | 138..337 | 157 | 27.2 | Plus |
aralar1-PA | 682 | CG2139-PA | 336..521 | 138..337 | 157 | 27.2 | Plus |
aralar1-PF | 694 | CG2139-PF | 336..521 | 138..337 | 157 | 27.2 | Plus |
aralar1-PC | 695 | CG2139-PC | 349..534 | 138..337 | 157 | 27.2 | Plus |
aralar1-PE | 707 | CG2139-PE | 361..546 | 138..337 | 157 | 27.2 | Plus |
GC1-PB | 321 | CG18347-PB | 38..294 | 56..308 | 153 | 23.4 | Plus |
GC1-PA | 321 | CG18347-PA | 38..294 | 56..308 | 153 | 23.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24045-PA | 339 | GI24045-PA | 1..339 | 1..339 | 1639 | 90.6 | Plus |
Dmoj\GI22760-PA | 695 | GI22760-PA | 333..619 | 30..327 | 167 | 23.5 | Plus |
Dmoj\GI11099-PA | 306 | GI11099-PA | 21..304 | 43..326 | 161 | 23.5 | Plus |
Dmoj\GI11098-PA | 299 | GI11098-PA | 4..297 | 33..326 | 159 | 22.5 | Plus |
Dmoj\GI23551-PA | 327 | GI23551-PA | 44..300 | 56..308 | 157 | 23.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13865-PA | 338 | GL13865-PA | 23..338 | 24..339 | 1635 | 95.3 | Plus |
Dper\GL14047-PA | 689 | GL14047-PA | 358..619 | 55..327 | 185 | 23.8 | Plus |
Dper\GL22257-PA | 312 | GL22257-PA | 29..285 | 56..308 | 171 | 23.8 | Plus |
Dper\GL14863-PA | 299 | GL14863-PA | 4..298 | 33..327 | 167 | 22.5 | Plus |
Dper\GL24959-PA | 637 | GL24959-PA | 354..613 | 54..309 | 153 | 21.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19143-PA | 338 | GA19143-PA | 23..338 | 24..339 | 1635 | 95.3 | Plus |
Dpse\GA15263-PA | 689 | GA15263-PA | 358..619 | 55..327 | 185 | 23.8 | Plus |
Dpse\sesB-PA | 299 | GA14229-PA | 4..298 | 33..327 | 167 | 22.5 | Plus |
Dpse\GA20254-PA | 303 | GA20254-PA | 15..243 | 48..285 | 154 | 25.1 | Plus |
Dpse\GA23392-PA | 295 | GA23392-PA | 24..283 | 48..325 | 148 | 22.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23466-PA | 339 | GM23466-PA | 1..339 | 1..339 | 1817 | 100 | Plus |
Dsec\GM12154-PA | 682 | GM12154-PA | 345..606 | 55..327 | 187 | 24.5 | Plus |
Dsec\GM26094-PA | 317 | GM26094-PA | 49..291 | 55..307 | 170 | 24.4 | Plus |
Dsec\GM23990-PA | 321 | GM23990-PA | 38..294 | 56..308 | 166 | 23.4 | Plus |
Dsec\GM25293-PA | 303 | GM25293-PA | 15..302 | 48..326 | 152 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18273-PA | 339 | GD18273-PA | 1..339 | 1..339 | 1817 | 100 | Plus |
Dsim\GD20656-PA | 317 | GD20656-PA | 49..291 | 55..307 | 170 | 24.4 | Plus |
Dsim\GD18793-PA | 321 | GD18793-PA | 38..294 | 56..308 | 166 | 23.4 | Plus |
Dsim\GD14324-PA | 303 | GD14324-PA | 15..302 | 48..326 | 152 | 23.3 | Plus |
Dsim\GD12723-PA | 629 | GD12723-PA | 439..618 | 54..230 | 152 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23673-PA | 339 | GJ23673-PA | 11..339 | 15..339 | 1647 | 92.4 | Plus |
Dvir\GJ22761-PA | 695 | GJ22761-PA | 333..619 | 30..327 | 183 | 24.1 | Plus |
Dvir\GJ23512-PA | 306 | GJ23512-PA | 26..276 | 56..308 | 172 | 24 | Plus |
Dvir\GJ15782-PA | 299 | GJ15782-PA | 4..297 | 33..326 | 165 | 22.8 | Plus |
Dvir\GJ23511-PA | 326 | GJ23511-PA | 43..299 | 56..308 | 165 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13246-PA | 337 | GK13246-PA | 2..337 | 5..339 | 1640 | 89.9 | Plus |
Dwil\GK13128-PA | 679 | GK13128-PA | 313..606 | 18..327 | 176 | 23 | Plus |
Dwil\GK19764-PA | 443 | GK19764-PA | 173..437 | 59..326 | 169 | 24.3 | Plus |
Dwil\GK11426-PA | 324 | GK11426-PA | 41..297 | 56..308 | 167 | 23.4 | Plus |
Dwil\GK11427-PA | 314 | GK11427-PA | 28..284 | 56..308 | 164 | 21.3 | Plus |
Dwil\GK13128-PA | 679 | GK13128-PA | 336..521 | 138..337 | 157 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10778-PA | 339 | GE10778-PA | 1..339 | 1..339 | 1797 | 98.8 | Plus |
Dyak\GE23386-PA | 682 | GE23386-PA | 345..606 | 55..327 | 186 | 24.5 | Plus |
Dyak\GE26151-PA | 321 | GE26151-PA | 38..294 | 56..308 | 167 | 23.4 | Plus |
Dyak\GE23386-PA | 682 | GE23386-PA | 336..521 | 138..337 | 156 | 27.2 | Plus |
Dyak\GE21842-PA | 303 | GE21842-PA | 15..302 | 48..326 | 156 | 23.3 | Plus |
Dyak\GE20124-PA | 624 | GE20124-PA | 434..613 | 54..230 | 154 | 26.2 | Plus |