Clone GH22259 Report

Search the DGRC for GH22259

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:222
Well:59
Vector:pOT2
Associated Gene/Transcriptv(2)k05816-RA
Protein status:GH22259.pep: gold
Preliminary Size:6169
Sequenced Size:7620

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3524 2003-01-01 Sim4 clustering to Release 3
v(2)k05816 2008-04-29 Picked prior to 5.5
v(2)k05816 2008-04-29 Stopped prior to 5.5

Clone Sequence Records

GH22259.complete Sequence

7620 bp assembled on 2009-12-04

GenBank Submission: BT120005.1

> GH22259.complete
TCGGATCTATACGTGCCCACCAAAAGGATATACAACCACACCCAACTAGA
AGGACCTACTAGCCCAGCTGACATCCTGGTTGTCCCGCAAAACGCACGGC
ACATTCGAAAAGGATACGCGATCAGTGAACCCAAGTGAATAAGGTGCCGT
CCAAAAACGATACGATCCGAATTAGTGGCATACGAAATATCCTTGTATAT
TTGGGCCCTCATACAGACTGAGCCAGAACAAAGAAAAAACGCCGAAATGC
CGAGCAGGAAGAAAGCCCAGGGGGAATCGGCCGCTGGTGAGGATGCGGAC
ATTGTGATCTCGGGACTTTCCGGGAAGCTGCCGGAGAGCAGCAACATCGA
GGAGTTCAAGTACAACCTGCTCAACGGCATCGACATGGTCACAGATGAGC
CGCGCCGTTGGGAGGCAGGCATCTATGGACTCCCCGAGCGTATGGCCAAA
ATGAAGGACTCCGATCTGGAGAAGTTCGACGACAAGTTCTTTAGCGTCCA
CCAGAAGCAGGCGGAGCTGATGGACCCCTGCATGCGGATGCTGCTGGAGC
TGACCCACGAGGCGATCATCGATGCGGGCATCAATCCCGTACAGCTGCGC
GGCAGTCGGACGGGCGTCTACATAGGCCTGTCCTTTGTGGAGACGGAGCA
CGAGATCCCCAACATGGAGCCGAGCAGTATCAACGGCTACTGCCTGACGG
GCTGTGCGCGTGCCATGTTCGCCAATCGCATCTCCTACACGTTCGACTTC
AAGGGGCCCAGCTTTATCGTGGACACCGCATGCTCCAGCTCGCTGGTGGC
CCTTAACCACGCCTTCGCGGACATGCGGGCGGGTCGCTGTGATTACGCCC
TGGTTGCGGGCGTGAATCTCATCCTAAAGCCCATCTTTGCCCTCCAGTTC
CTCAGGCTGGGCATCGTGAGCCACGACGGCTCCTGCAAGACCTTCGATGC
GGCGGCCAACGGCTATGCCCGGGCGGACACCTGCGCCGTTGTGCTGCTCC
AGAGGCGTAAGGAGGCCAAGCGGGTGTACGCCAGCATCCTAAATGTTCGG
ACCAATACGGACGGATTCAAGGAGCAGGGCGTAACCTTCCCAGACGGCCG
CATGCAGCAGGCCCTGCTGGAGGAGACCTACAGCGAGATCGGCCTCAATC
CGGACGAGGTGGTCTACGTGGAGGCACACGGCAGCGGCACACCGGTGGGC
GATGACCAGGAAGCCAACATGCTGAGCAACTTCTTCTGTCGCCCCTCGCG
ATCCACTCCGCTGCTTATTGGCTCAGTGAAGTCGAACATGGGTCACGCGG
AGCCAGCCTCGGGAGTGAGTGCCCTGGCCAAGATGATCATCGCCATGGAG
GAGGGCATTATTCCGAAGAATCTGCACTATCGCACGCCCAATCCTTCGGT
TCCGGCTCTGGTCGAGGGTAAGCTTAAGGTGGTGGATCGCAATCTTCCCT
GGCAGGGTGGCATTGTGGGTCTGAACTCCTTCGGCTTTGGAGGAGCCAAT
GCCCATGTGGTACTAAAGTCGCACACTAAAGCCAAAGAGCCTAAGGCATG
CCCGAAGGCTGGGGAGGCCGAACAGTCCCTGAGTCTAGTTACCTGTTCTG
GCCGCACGGAGGATGCAGTGAATCAGTTGCTGAAAGTTGCCACCGAGCAG
AGGCACGATCAGGAGCTGCTGACCCTCATCAATGACATCCACTCACATCC
TATTCCCCTGCATCCGTTCAGGGGATACGCTGTTCTCGGTACCAGCGGAT
GCGTTAAGGAGGAGGTGCTGCCCTACGAGGAGGAGGAGCGACCCATCTGG
TTCGTCTACGCCGGCATGGGCAGTCAATGGGCCAGGATGGCTAAGGATCT
CATGCAGCTGGAGGTTTTCCGGAACTCCATACAGCACTGCGCCGAGGTTC
TGGCCCAGGTGGACTTTGATCTTATAGACGTGCTTACCCGTTCCACGGAG
CGAACCTTTGACAATATGCTCTACTCCTTTGTCTCCGTGTCCGCCGTGCA
GGTGGCGTTGACAGATCTTCTCCGGGTGCTGGACATACGACCAGATGGAA
TCATTGGCCATTCGGCTGGTGAGCTGGGGGCAGCCTACATGGACGGATGT
CTAACGGCGGAGCAAACAGTTCTGGCCGCCTATTGGCGCGGCAGGAGCGT
CCTGGACACTCCGGACTTGCCGCGCGGAAAGATGGCTGCTGTAGGTTTGA
GCTGGGAGCAGATCGGATCACAGATCCCAAAGGATTGCTATCCGGTGTGT
CACAACAGTGATGACAATTGCACGGTCTCCGGGCCACCGTCATCCATGGA
CGCGATGATAGAGGACCTCACGGCAAAGGGAATTTTCGTGAGAGAGGTTG
GCTCTGGAGGCTATGCTTTCCACAGTCCGTACATTGAAGGAGCGGCTCCC
ATGCTGCGTAGAAGTCTGGAGCGACTGATCACGGAGCCCAAGAAGAAGAG
TATTCGATGGCTTAGTACTAGTGTGAAAGAAGCGGAGTGGGACTCGGAGA
AAAACCACCTGGCATCGGCTGGCTACTTTATAAACAACCTCATATCCCCC
GTGCTCTTTCATCAAGCTGTCAAGCGGATTCCCCAAAACGCTCTCATCGT
GGAGATCGCACCCCATGGACTCTTCAGGGCGATTCTCCGATCCTTAAGTC
CGCAGATTAGCTATGTGAGTCTGATGCAGCGAGGTCATGCCAATAACTTT
GAGTTCTTGCTGAGCCAGTTGGGCAGACTCTACGCTGCCGGAGGGCAGCC
GCAGATCCTGAAGATCTCCCCTTCCATCCCCTATCCCGTTTCCCGTGGCA
CTCCCATGCTGGGCTCCTTAGTGGGCTGGGATCACACACAGAAGTGGAAC
TACCCCAAGTTCAAGGGCGGCAGACAGGCGGGACAGCTTAGTGTGGAGCT
AGATTTGGGCAAGGAGGAAAACGTCTATCTAGCGGGGCACACGATCGACG
GCAGAGTCTTGTTCCCCGCAACCGGCTACATGACCCTGGCCTGGATGAGT
CTGGCCCAACAGCAGGGATTGGACTACTTGCGCACGCCCGTGCTATTCGA
GGATGTGGTCTTCCATCGGGCCACGATCCTTAGCGTGGGCACTGTGGTAA
AACTAACACTCAACTTCTTTCCGGGCAGCAGCTCCTTTGAAATCTGTGAA
GGCACAAGCCTGGTGACATCGGGCAAGATCCGTCTGGTGAGCAATGTGCA
GCAGGAGCAGCTTCAGCTGTCATCTCTACCGGGAATCGCCGGCTCCAACA
AGCTGAGCACCAAGGACATTTACAAGGAGCTAAGACTTAGGGGCTACGAC
TACACTGGTGTTTTCCAGGGCATTTTGGAGTCGGATATTTCGGCGGTGAC
GGGTCAGCTGCAGTGGGCTGACAATTGGATCAGTTTTATGGACACCATGC
TGCAGTTTCGCATCCTGAGCAATGATATCCGAGAACTGTACGTGCCCACG
GGAATAGAGAGGGCACTGATAGATCCTCTCAAGCACCTGGAGCTGGCAAA
GAAGCACCAACAGAAGTTAACTGTCAACTGGCATCGCAACATTTCCGTAG
TCAAGTGCGGTGGAGTGGAGATACACAAGATGAAGACCGCCCAGACCCAA
AGGCGTTCTGGTGGCCAATCTCCACCCAGCTTGGAGCGCTATAGATTCTG
GCCTCATTCCCAGCACTTGGGTCAGCGGGAGGAGCAGGAAAAGTCAAGGA
GCACAGCTCTAGCGGTGGCCATTCAATTGATCATCGAGAACAGCGGTGGA
GCTGTAAAGCTCAAGGGCGTGGAACTGGCTGGATCCCGGTCCACTTTGGA
TGCGCTGAGTGCCGTCCAGCTTCTCGAGCTGATCGAAAGGGAACCGATTC
TGGTGGGCGACATGGCGGTGGTTACCAGCTCCTCCAATGAATCCGAACTG
GGTGAGCAGCTCAAGGAGCACGGTATTCGGGTGATAGTCAAGGATATCAA
AGCTGGTGCGGTGGAGCAGCAATGCCATTTCGTGTACTCTGTGAATATGC
TAGCCCAGAACTCTGTCAAGGATCTGCAGCACTGCTTGGATAGTCTGAAG
TCCGATTCGGGATTCCTGCTCCTGGAGGAAGCAGCCAGCAGGTATAACAT
TATAGGAAAGGAGAAGTTGAACAAACTTAAGCTGGTTTCAGTTTTGGAGC
AGTTCTTCGGTACAGATCGAGTGCTTGTCCTAGTCAGAAAACTATCGAAG
GTGCAATCCAGCCAAGCCCTGACACTTCACCTCACCAATAAACAGTTCAA
GTGGGTCAACGAGCTAAAAAACTCTATTGCAAAGGCCCAAGCTGAAGAGA
AAAACCTCTACTTGGTGGCCCAGGGTGAACCCAATTCAGGAGCTTTGGGC
TTGATGAACTGCCTGAAGAGGGAAGCTGGAGGGCATTTCCTACGGCTATA
CCTTATTCTGGATGAAGGTGTGCCCCAGTTCTCCCTGGACGATCCCTTCT
ACGCCGCACAGTTGGCCAAGGATCTGGTCGTCAATGTCTACAGAAATGGA
AGCTGGGGTAGCTACCGTCACCTGAAGATGGAATCCCGGCCGCCCATGCT
GCCAGTGGAGCAGGCGTATGTGAACACCCTGGTCAAGGGGGATCTCTCAT
CACTTCGCTGGATCGAGAGTCCTCGTTCCAGTCCCATCCAGTCGCAATTG
GAGCCCTGCACCGTTTACTATGCTCCGCTCAATTTCCGGGATGTGATGTT
GGCCTCCGGTAAACTGGGAGTGGATGCTCTGCCTGGGGATCTGGCCTACC
AGGACTGTGTCCTTGGTCTGGAATTCGCTGGCAGGGATTCGTGCGGCCGT
CGTGTAATGGCAATGGTTACTGCCAAATCTTTGGCCACCAACTGCTTGGC
CAACAGGAATCTCCTCTGGGAAGTCCCATCTAAGTGGACCATGGAGCAGG
CTTCGACCGTTCCCTGTGTTTATGCCACCGTTTATTACGCTTTGGTGGTC
AGGGGCCAAATGAAGGAGGGTGAAAGGATCCTCATCCACGCCGGCTCTGG
AGGAGTTGGTCAGGCGGCCATTTCGGTGGCTTTGGCTCACGGACTGACTG
TCTTCACCACTGTGGGCAGCAAGGAGAAGCGGGAGTTCCTGCTGAAGCGA
TTCCCCAAGCTGAAAGCTAAGAATATTGGCAATTCGCGAGACACCTCTTT
CGAGCAATTGATCATGAGCGAAACCCACGGAAATGGAGTGGAACTTGTGC
TGAACTCTCTCTCCGAGGAGAAGCTGCAAGCCTCCATTCGCTGTCTGGCT
TTGAATGGCCGCTTCCTGGAGATCGGCAAGTTTGACTTGAGCAACAACAC
TCCGCTAGGGATGTCGGTGTTCCTCAAGAACACCTCCTTCCACGGAATCC
TTCTGGACAGCGTGATGGAGGGGGAGGAGGAGATGCAGCTAATGGTTGCC
AAGTTGGTGGCGGAGGGTATCAAGAGTGGAGCAGTGCAGCCGCTGCCTAC
CACAGTCTTTGCAGAGCAGGAGATCGAGAAGGCGTTCCGTTTCATGGCGT
CCGGCAAACATATTGGCAAGGTGGTGATCAAGGTACGTTTGGAGGAGGAA
CAGCAGGCGGCTCTCCCGCGACTTAGGCAAATTCAGGCCATACCGCGCTC
CTACATGCACCCAGAGAAGAGCTACATCTTGGTGGGGGGACTTGGGGGAT
TCGGTCTGGAGCTGGCCAACTGGCTAGTTTCCAGAGGAGCCCGCTTTCTG
GTTCTGAGCTCTCGCTCTGGGGTGAAGAGCGGGTACCAGGCCCTGATGAT
TCGTCGCTGGCACGACCGTGGAGTTCAGGTTCAGATCGATACCAACGATG
TGACCACCGCTGTTGGCTGCCAGAGACTCCTAGAGGTTAGTAATAAGCTG
GCCCTGGTTGGAGGTATCTTTAACCTCGCGGCTGTACTACGGGATGGACT
GATCGAAGATCAAAGCCCGAAGAACTTTGAAAAGGTAAGTGCACCGAAGC
TACTGGCCACCATACACTTGGACAAGATCTCCCGGGAAATTTGTCCTGCA
CTGGAGTACTTCGTGTGCTTCTCCAGCTTGTCCTGCGGCAGGGGAAACAT
GGGACAGACCAACTATGGACTGGCGAACTCCACGATGGAAAGGATATGCG
AGCAGCGGCAGGAATATGGTTATCCGGGCACAGCGATTCAATGGGGAGCA
ATTGGGGACACCGGACTGATCATCGAGCACATGGGCAACAACGAAACAGT
TGTGGGCGGCACTCTGCCGCAGCGGATGATCAGCTGTCTGGAGACTCTGG
ACCTATTTCTGCAGCAGCCCCATCCCGTCATGGCCTCCATGGTGGTGGCG
GAAAAACGCAAGACGGAGCAGGCCAACCGGCTGAGCTTGATAGCCACGAT
CGCGAATATCATGGGACTGAGGGATGTAAAGAGTGTCTCCGATAAGACCA
CCCTCTTCGATCTTGGCATGGACTCGCTGATGAGCACAGAGATCAAGCAG
ACGTTGGAGCGTCACTTTGACCTGGTGCTGAGCGCCCAGGAGATCCGCCA
GCTAACCTTTAGCGCCCTGCGCCAGATAGACGCCCAGGAACCGCCCTCCG
CTTCAGTCTCATCGCCCTCAGCCTCTTCCACCCTATCAAGGATCAAGGAG
GAGGCCTGCGTGGAGGTCCAGCCCCAGAGCGATGAGACGCGCAAGGTATT
CGCCAAGGAAGTATTACCCCAGGAGGTGATGGTGCGCCTTCGGTCAAAGG
CGCCCGTGGCCAGCGAGGATCCGGCTGTGTTCTTCTTGGCTCCCATCGAG
GGATTCACAATAGCCGTGGAGGCGCTGGCCGCCTCGCTCACCTGCCCCGC
CTACGGGCTGCAGTGCACGGAGCAAGTGCCCCTGGACTCCATCGAGGCCT
GTGCCGCCTACTATCTGCGCCAGATCCAGAAGCTCCAGCCCCTCGGACCG
TACCACATCGTAGGCTACTCCTACGGCTGCCTGCTCGCCCACGCCATTGC
TGTGGCGCTGGAGCAGCGCCGCTTCGGGGTCAAGGTCATCATGCTGGACG
GAGCGCCCACCATGGCCAGCGGCTATGTCCAGGAGGCCAAGAAGCAGACG
GACGACCTCAACCGGCAGCAGTCCATGACGTTGGCCTACTTTGGAGCTCT
GCTCGCCGACGTGGATTACAACCAGCTACTGCAACTCCTCGATGGAGTCC
AGACATGGCCCTCCAAGCTCGACAAACTAGCAGACACTCTGGCTGGTTAC
ACGCAGCAAACCAGAGAAGTGATCAAGAAGGCCGCCTGCATGTTCAAACA
GAAGCTGCTACTTTCTGAGAGCTACAAGGGCGCCAAGCAGCTCCACAGCG
ATGTGGTCTTGATCAAGTCGGCCGAGCACAATGCGATTATGGCCCAGGAC
TATGGCCTCAAGGAGATTTGCAGTGCCCAGATCGACATGCATGTGGTGGA
GGGTACACACAGGACCTTCCTCAAGGAGCCGCACACTCTACAGATCATCG
AGCGCGTCCTGCGGAAGCGTCCCTAGTGGAAGGGAAGTAGTTCGTACGAT
TATGCTGATGAATTATCCTGTAGAACTTAATGTACATATACCCTAATCCT
ATCAATACACGTAGCAATCGCGCATTGATTGTTTAAGAATAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA

GH22259.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:46:15
Subject Length Description Subject Range Query Range Score Percent Strand
v(2)k05816-RA 8100 v(2)k05816-RA 84..7675 1..7592 37960 100 Plus
v(2)k05816.e 7853 v(2)k05816.e 264..7853 1..7590 37950 100 Plus
v(2)k05816.b 7690 v(2)k05816.b 40..7634 1..7592 37905 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:04:24
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 3049021..3054251 1895..7125 25750 99.5 Plus
chr2L 23010047 chr2L 3046595..3048076 417..1898 7260 99.3 Plus
chr2L 23010047 chr2L 3064096..3065960 4657..6518 2255 74.9 Plus
chr2L 23010047 chr2L 3045301..3045533 189..421 1165 100 Plus
chr2L 23010047 chr2L 3055002..3055228 7364..7590 1135 100 Plus
chr2L 23010047 chr2L 3043621..3043808 1..188 940 100 Plus
chr2L 23010047 chr2L 3054796..3054940 7221..7365 725 100 Plus
chr2L 23010047 chr2L 3054312..3054410 7123..7221 480 99 Plus
chr2L 23010047 chr2L 3060121..3060957 682..1521 310 69.4 Plus
chr2L 23010047 chr2L 3059683..3059769 328..414 225 83.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:02:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:04:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3049390..3054620 1895..7125 26155 100 Plus
2L 23513712 2L 3046948..3048429 417..1898 7410 100 Plus
2L 23513712 2L 3064465..3066329 4657..6518 2240 74.8 Plus
2L 23513712 2L 3045654..3045886 189..421 1165 100 Plus
2L 23513712 2L 3055375..3055603 7364..7592 1145 100 Plus
2L 23513712 2L 3043973..3044160 1..188 940 100 Plus
2L 23513712 2L 3055169..3055313 7221..7365 725 100 Plus
2L 23513712 2L 3054685..3054783 7123..7221 495 100 Plus
2L 23513712 2L 3060490..3061326 682..1521 310 69.4 Plus
2L 23513712 2L 3060052..3060138 328..414 225 83.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:43:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3049390..3054620 1895..7125 26155 100 Plus
2L 23513712 2L 3046948..3048429 417..1898 7410 100 Plus
2L 23513712 2L 3045654..3045886 189..421 1165 100 Plus
2L 23513712 2L 3055375..3055603 7364..7592 1145 100 Plus
2L 23513712 2L 3043973..3044160 1..188 940 100 Plus
2L 23513712 2L 3055169..3055313 7221..7365 725 100 Plus
2L 23513712 2L 3064690..3064920 4882..5112 645 85.2 Plus
2L 23513712 2L 3064936..3065195 5128..5387 610 82.3 Plus
2L 23513712 2L 3054685..3054783 7123..7221 495 100 Plus
2L 23513712 2L 3065398..3065621 5587..5810 415 79 Plus
2L 23513712 2L 3066220..3066329 6409..6518 280 83.6 Plus
2L 23513712 2L 3060490..3060603 682..795 270 82.4 Plus
2L 23513712 2L 3065938..3066132 6127..6321 240 74.8 Plus
2L 23513712 2L 3060052..3060138 328..414 225 83.9 Plus
2L 23513712 2L 3065766..3065923 5955..6112 220 75.9 Plus
2L 23513712 2L 3065213..3065356 5405..5548 195 75.6 Plus
2L 23513712 2L 3063143..3063236 3356..3449 185 79.7 Plus
2L 23513712 2L 3060823..3060888 1015..1080 180 84.8 Plus
2L 23513712 2L 3061231..3061326 1426..1521 165 78.1 Plus
2L 23513712 2L 3060235..3060390 424..579 165 73.7 Plus
2L 23513712 2L 3063520..3063584 3715..3779 160 83 Plus
2L 23513712 2L 3061084..3061169 1279..1364 160 79 Plus
2L 23513712 2L 3060931..3061019 1123..1211 160 78.6 Plus
2L 23513712 2L 3061585..3061651 1798..1864 155 82 Plus
2L 23513712 2L 3064314..3064394 4515..4595 150 79 Plus
Blast to na_te.dros performed 2019-03-16 01:04:23
Subject Length Description Subject Range Query Range Score Percent Strand
G2 3102 G2 G2 3102bp 2742..2798 2367..2311 123 68.4 Minus

GH22259.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:05:33 Download gff for GH22259.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 3054315..3054410 7126..7221 98 -> Plus
chr2L 3054797..3054940 7222..7365 100 -> Plus
chr2L 3043621..3043808 1..188 100 -> Plus
chr2L 3045301..3045530 189..418 100 -> Plus
chr2L 3049023..3054251 1897..7125 99 -> Plus
chr2L 3046597..3048074 419..1896 99 -> Plus
chr2L 3055004..3055228 7366..7590 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:21:10 Download gff for GH22259.complete
Subject Subject Range Query Range Percent Splice Strand
v(2)k05816-RA 1..7230 247..7476 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:26:15 Download gff for GH22259.complete
Subject Subject Range Query Range Percent Splice Strand
v(2)k05816-RA 1..7230 247..7476 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:38:58 Download gff for GH22259.complete
Subject Subject Range Query Range Percent Splice Strand
v(2)k05816-RA 1..7230 247..7476 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:21:26 Download gff for GH22259.complete
Subject Subject Range Query Range Percent Splice Strand
v(2)k05816-RA 1..7230 247..7476 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:21:08 Download gff for GH22259.complete
Subject Subject Range Query Range Percent Splice Strand
v(2)k05816-RA 1..7590 1..7590 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:26:15 Download gff for GH22259.complete
Subject Subject Range Query Range Percent Splice Strand
v(2)k05816-RA 1..7590 1..7590 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:38:58 Download gff for GH22259.complete
Subject Subject Range Query Range Percent Splice Strand
v(2)k05816-RA 1..7590 1..7590 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:21:26 Download gff for GH22259.complete
Subject Subject Range Query Range Percent Splice Strand
v(2)k05816-RA 27..7616 1..7590 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:05:33 Download gff for GH22259.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3055170..3055313 7222..7365 100 -> Plus
2L 3055377..3055601 7366..7590 100   Plus
2L 3043973..3044160 1..188 100 -> Plus
2L 3045654..3045883 189..418 100 -> Plus
2L 3046950..3048427 419..1896 100 -> Plus
2L 3049392..3054620 1897..7125 100 -> Plus
2L 3054688..3054783 7126..7221 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:05:33 Download gff for GH22259.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3055170..3055313 7222..7365 100 -> Plus
2L 3055377..3055601 7366..7590 100   Plus
2L 3043973..3044160 1..188 100 -> Plus
2L 3045654..3045883 189..418 100 -> Plus
2L 3046950..3048427 419..1896 100 -> Plus
2L 3049392..3054620 1897..7125 100 -> Plus
2L 3054688..3054783 7126..7221 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:05:33 Download gff for GH22259.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3055170..3055313 7222..7365 100 -> Plus
2L 3055377..3055601 7366..7590 100   Plus
2L 3043973..3044160 1..188 100 -> Plus
2L 3045654..3045883 189..418 100 -> Plus
2L 3046950..3048427 419..1896 100 -> Plus
2L 3049392..3054620 1897..7125 100 -> Plus
2L 3054688..3054783 7126..7221 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:38:58 Download gff for GH22259.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3055170..3055313 7222..7365 100 -> Plus
arm_2L 3049392..3054620 1897..7125 100 -> Plus
arm_2L 3054688..3054783 7126..7221 100 -> Plus
arm_2L 3043973..3044160 1..188 100 -> Plus
arm_2L 3045654..3045883 189..418 100 -> Plus
arm_2L 3046950..3048427 419..1896 100 -> Plus
arm_2L 3055377..3055601 7366..7590 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:12:55 Download gff for GH22259.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3045654..3045883 189..418 100 -> Plus
2L 3046950..3048427 419..1896 100 -> Plus
2L 3049392..3054620 1897..7125 100 -> Plus
2L 3054688..3054783 7126..7221 100 -> Plus
2L 3055170..3055313 7222..7365 100 -> Plus
2L 3055377..3055601 7366..7590 100   Plus
2L 3043973..3044160 1..188 100 -> Plus

GH22259.pep Sequence

Translation from 246 to 7475

> GH22259.pep
MPSRKKAQGESAAGEDADIVISGLSGKLPESSNIEEFKYNLLNGIDMVTD
EPRRWEAGIYGLPERMAKMKDSDLEKFDDKFFSVHQKQAELMDPCMRMLL
ELTHEAIIDAGINPVQLRGSRTGVYIGLSFVETEHEIPNMEPSSINGYCL
TGCARAMFANRISYTFDFKGPSFIVDTACSSSLVALNHAFADMRAGRCDY
ALVAGVNLILKPIFALQFLRLGIVSHDGSCKTFDAAANGYARADTCAVVL
LQRRKEAKRVYASILNVRTNTDGFKEQGVTFPDGRMQQALLEETYSEIGL
NPDEVVYVEAHGSGTPVGDDQEANMLSNFFCRPSRSTPLLIGSVKSNMGH
AEPASGVSALAKMIIAMEEGIIPKNLHYRTPNPSVPALVEGKLKVVDRNL
PWQGGIVGLNSFGFGGANAHVVLKSHTKAKEPKACPKAGEAEQSLSLVTC
SGRTEDAVNQLLKVATEQRHDQELLTLINDIHSHPIPLHPFRGYAVLGTS
GCVKEEVLPYEEEERPIWFVYAGMGSQWARMAKDLMQLEVFRNSIQHCAE
VLAQVDFDLIDVLTRSTERTFDNMLYSFVSVSAVQVALTDLLRVLDIRPD
GIIGHSAGELGAAYMDGCLTAEQTVLAAYWRGRSVLDTPDLPRGKMAAVG
LSWEQIGSQIPKDCYPVCHNSDDNCTVSGPPSSMDAMIEDLTAKGIFVRE
VGSGGYAFHSPYIEGAAPMLRRSLERLITEPKKKSIRWLSTSVKEAEWDS
EKNHLASAGYFINNLISPVLFHQAVKRIPQNALIVEIAPHGLFRAILRSL
SPQISYVSLMQRGHANNFEFLLSQLGRLYAAGGQPQILKISPSIPYPVSR
GTPMLGSLVGWDHTQKWNYPKFKGGRQAGQLSVELDLGKEENVYLAGHTI
DGRVLFPATGYMTLAWMSLAQQQGLDYLRTPVLFEDVVFHRATILSVGTV
VKLTLNFFPGSSSFEICEGTSLVTSGKIRLVSNVQQEQLQLSSLPGIAGS
NKLSTKDIYKELRLRGYDYTGVFQGILESDISAVTGQLQWADNWISFMDT
MLQFRILSNDIRELYVPTGIERALIDPLKHLELAKKHQQKLTVNWHRNIS
VVKCGGVEIHKMKTAQTQRRSGGQSPPSLERYRFWPHSQHLGQREEQEKS
RSTALAVAIQLIIENSGGAVKLKGVELAGSRSTLDALSAVQLLELIEREP
ILVGDMAVVTSSSNESELGEQLKEHGIRVIVKDIKAGAVEQQCHFVYSVN
MLAQNSVKDLQHCLDSLKSDSGFLLLEEAASRYNIIGKEKLNKLKLVSVL
EQFFGTDRVLVLVRKLSKVQSSQALTLHLTNKQFKWVNELKNSIAKAQAE
EKNLYLVAQGEPNSGALGLMNCLKREAGGHFLRLYLILDEGVPQFSLDDP
FYAAQLAKDLVVNVYRNGSWGSYRHLKMESRPPMLPVEQAYVNTLVKGDL
SSLRWIESPRSSPIQSQLEPCTVYYAPLNFRDVMLASGKLGVDALPGDLA
YQDCVLGLEFAGRDSCGRRVMAMVTAKSLATNCLANRNLLWEVPSKWTME
QASTVPCVYATVYYALVVRGQMKEGERILIHAGSGGVGQAAISVALAHGL
TVFTTVGSKEKREFLLKRFPKLKAKNIGNSRDTSFEQLIMSETHGNGVEL
VLNSLSEEKLQASIRCLALNGRFLEIGKFDLSNNTPLGMSVFLKNTSFHG
ILLDSVMEGEEEMQLMVAKLVAEGIKSGAVQPLPTTVFAEQEIEKAFRFM
ASGKHIGKVVIKVRLEEEQQAALPRLRQIQAIPRSYMHPEKSYILVGGLG
GFGLELANWLVSRGARFLVLSSRSGVKSGYQALMIRRWHDRGVQVQIDTN
DVTTAVGCQRLLEVSNKLALVGGIFNLAAVLRDGLIEDQSPKNFEKVSAP
KLLATIHLDKISREICPALEYFVCFSSLSCGRGNMGQTNYGLANSTMERI
CEQRQEYGYPGTAIQWGAIGDTGLIIEHMGNNETVVGGTLPQRMISCLET
LDLFLQQPHPVMASMVVAEKRKTEQANRLSLIATIANIMGLRDVKSVSDK
TTLFDLGMDSLMSTEIKQTLERHFDLVLSAQEIRQLTFSALRQIDAQEPP
SASVSSPSASSTLSRIKEEACVEVQPQSDETRKVFAKEVLPQEVMVRLRS
KAPVASEDPAVFFLAPIEGFTIAVEALAASLTCPAYGLQCTEQVPLDSIE
ACAAYYLRQIQKLQPLGPYHIVGYSYGCLLAHAIAVALEQRRFGVKVIML
DGAPTMASGYVQEAKKQTDDLNRQQSMTLAYFGALLADVDYNQLLQLLDG
VQTWPSKLDKLADTLAGYTQQTREVIKKAACMFKQKLLLSESYKGAKQLH
SDVVLIKSAEHNAIMAQDYGLKEICSAQIDMHVVEGTHRTFLKEPHTLQI
IERVLRKRP*

GH22259.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:09:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14400-PA 2411 GF14400-PA 1..2411 1..2409 11483 88.7 Plus
Dana\GF14401-PA 2550 GF14401-PA 149..2547 18..2407 7889 61.3 Plus
Dana\GF17575-PA 442 GF17575-PA 29..442 19..428 237 22.8 Plus
Dana\GF17576-PA 442 GF17576-PA 29..442 19..428 237 22.8 Plus
Dana\GF17574-PA 442 GF17574-PA 29..442 19..428 237 22.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:09:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24919-PA 2409 GG24919-PA 1..2409 1..2409 12299 96 Plus
Dere\GG24920-PA 2544 GG24920-PA 145..2541 18..2407 7788 60.4 Plus
Dere\GG23076-PA 1246 GG23076-PA 1..1139 928..2098 2218 41 Plus
Dere\GG12975-PA 439 GG12975-PA 164..437 156..426 215 25.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:09:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10962-PA 2427 GH10962-PA 9..2424 4..2407 9902 76.1 Plus
Dgri\GH10963-PA 2433 GH10963-PA 37..2430 16..2407 7764 60.2 Plus
Dgri\GH20680-PA 2346 GH20680-PA 1..2320 47..2401 4306 40.2 Plus
Dgri\GH19666-PA 1239 GH19666-PA 47..1223 219..1419 2049 37.2 Plus
Dgri\GH23527-PA 777 GH23527-PA 1..777 47..827 1814 44.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:06:06
Subject Length Description Subject Range Query Range Score Percent Strand
FASN2-PA 2409 CG3524-PA 1..2409 1..2409 12330 100 Plus
FASN2-PB 2410 CG3524-PB 1..2410 1..2409 12318 100 Plus
FASN1-PC 2540 CG3523-PC 141..2537 18..2407 7559 60.8 Plus
FASN1-PA 2438 CG3523-PA 39..2435 18..2407 7559 60.8 Plus
FASN3-PC 2394 CG17374-PC 20..2369 18..2402 4237 39.3 Plus
CG12170-PA 438 CG12170-PA 26..437 19..426 251 22.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:09:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10509-PA 2419 GI10509-PA 1..2416 1..2407 10079 76.7 Plus
Dmoj\GI10520-PA 2433 GI10520-PA 37..2430 16..2407 7828 61.2 Plus
Dmoj\GI23207-PA 2395 GI23207-PA 20..2369 18..2401 4582 40.6 Plus
Dmoj\GI23365-PA 434 GI23365-PA 11..432 11..427 210 24 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:09:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18554-PA 2603 GL18554-PA 199..2600 18..2407 7859 60.9 Plus
Dper\GL18552-PA 1402 GL18552-PA 1..1398 524..1955 5620 75.9 Plus
Dper\GL18551-PA 480 GL18551-PA 1..469 1..468 2288 88.9 Plus
Dper\GL12292-PA 1975 GL12292-PA 1..918 47..965 2048 43.3 Plus
Dper\GL12292-PA 1975 GL12292-PA 919..1594 1418..2098 1800 51.4 Plus
Dper\GL18553-PA 355 GL18553-PA 1..354 2058..2408 1597 87.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:09:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17498-PA 2410 GA17498-PA 1..2409 1..2408 10963 84.3 Plus
Dpse\GA17497-PA 2603 GA17497-PA 199..2600 18..2407 7848 60.8 Plus
Dpse\GA26263-PB 2367 GA26263-PB 23..2341 18..2401 4498 39.8 Plus
Dpse\GA26596-PA 440 GA26596-PA 164..439 156..428 229 27.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:09:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18393-PA 3089 GM18393-PA 690..3086 18..2407 7769 60.6 Plus
Dsec\GM18393-PA 3089 GM18393-PA 1..552 1..552 2881 97.3 Plus
Dsec\GM26679-PA 799 GM26679-PA 116..672 1539..2098 1501 51.2 Plus
Dsec\GM10827-PA 439 GM10827-PA 164..437 156..426 217 26.7 Plus
Dsec\GM26679-PA 799 GM26679-PA 1..97 928..1026 167 43.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:09:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23207-PA 2529 GD23207-PA 146..2526 18..2407 7575 59.9 Plus
Dsim\GD23205-PA 1642 GD23205-PA 1..1086 1..1064 5569 94.9 Plus
Dsim\GD23206-PA 623 GD23206-PA 1..623 1787..2409 3312 99.4 Plus
Dsim\GD23205-PA 1642 GD23205-PA 1087..1642 1129..1684 2853 97.1 Plus
Dsim\GD24136-PA 295 GD24136-PA 7..295 1682..1969 1062 73.4 Plus
Dsim\GD19804-PA 439 GD19804-PA 164..437 156..426 216 26.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:09:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21725-PA 2419 GJ21725-PA 11..2416 6..2407 9930 76.3 Plus
Dvir\GJ21736-PA 2431 GJ21736-PA 36..2428 16..2407 7777 61 Plus
Dvir\GJ22868-PA 2346 GJ22868-PA 1..2320 47..2401 4430 39.7 Plus
Dvir\GJ10359-PA 433 GJ10359-PA 19..431 19..427 229 25.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:09:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18430-PA 2372 GK18430-PA 1..2371 1..2408 10179 79.3 Plus
Dwil\GK18431-PA 2529 GK18431-PA 133..2526 18..2407 7814 60.6 Plus
Dwil\GK12914-PA 2400 GK12914-PA 24..2374 18..2401 4453 39.8 Plus
Dwil\GK18428-PA 305 GK18428-PA 1..297 1..288 1345 84.5 Plus
Dwil\GK12233-PA 437 GK12233-PA 26..437 19..427 245 24.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:09:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18209-PA 2409 GE18209-PA 1..2409 1..2409 12602 97 Plus
Dyak\GE18210-PA 2540 GE18210-PA 141..2537 18..2407 7814 60.7 Plus
Dyak\GE10150-PA 439 GE10150-PA 165..437 157..426 217 26.8 Plus

GH22259.hyp Sequence

Translation from 246 to 7475

> GH22259.hyp
MPSRKKAQGESAAGEDADIVISGLSGKLPESSNIEEFKYNLLNGIDMVTD
EPRRWEAGIYGLPERMAKMKDSDLEKFDDKFFSVHQKQAELMDPCMRMLL
ELTHEAIIDAGINPVQLRGSRTGVYIGLSFVETEHEIPNMEPSSINGYCL
TGCARAMFANRISYTFDFKGPSFIVDTACSSSLVALNHAFADMRAGRCDY
ALVAGVNLILKPIFALQFLRLGIVSHDGSCKTFDAAANGYARADTCAVVL
LQRRKEAKRVYASILNVRTNTDGFKEQGVTFPDGRMQQALLEETYSEIGL
NPDEVVYVEAHGSGTPVGDDQEANMLSNFFCRPSRSTPLLIGSVKSNMGH
AEPASGVSALAKMIIAMEEGIIPKNLHYRTPNPSVPALVEGKLKVVDRNL
PWQGGIVGLNSFGFGGANAHVVLKSHTKAKEPKACPKAGEAEQSLSLVTC
SGRTEDAVNQLLKVATEQRHDQELLTLINDIHSHPIPLHPFRGYAVLGTS
GCVKEEVLPYEEEERPIWFVYAGMGSQWARMAKDLMQLEVFRNSIQHCAE
VLAQVDFDLIDVLTRSTERTFDNMLYSFVSVSAVQVALTDLLRVLDIRPD
GIIGHSAGELGAAYMDGCLTAEQTVLAAYWRGRSVLDTPDLPRGKMAAVG
LSWEQIGSQIPKDCYPVCHNSDDNCTVSGPPSSMDAMIEDLTAKGIFVRE
VGSGGYAFHSPYIEGAAPMLRRSLERLITEPKKKSIRWLSTSVKEAEWDS
EKNHLASAGYFINNLISPVLFHQAVKRIPQNALIVEIAPHGLFRAILRSL
SPQISYVSLMQRGHANNFEFLLSQLGRLYAAGGQPQILKISPSIPYPVSR
GTPMLGSLVGWDHTQKWNYPKFKGGRQAGQLSVELDLGKEENVYLAGHTI
DGRVLFPATGYMTLAWMSLAQQQGLDYLRTPVLFEDVVFHRATILSVGTV
VKLTLNFFPGSSSFEICEGTSLVTSGKIRLVSNVQQEQLQLSSLPGIAGS
NKLSTKDIYKELRLRGYDYTGVFQGILESDISAVTGQLQWADNWISFMDT
MLQFRILSNDIRELYVPTGIERALIDPLKHLELAKKHQQKLTVNWHRNIS
VVKCGGVEIHKMKTAQTQRRSGGQSPPSLERYRFWPHSQHLGQREEQEKS
RSTALAVAIQLIIENSGGAVKLKGVELAGSRSTLDALSAVQLLELIEREP
ILVGDMAVVTSSSNESELGEQLKEHGIRVIVKDIKAGAVEQQCHFVYSVN
MLAQNSVKDLQHCLDSLKSDSGFLLLEEAASRYNIIGKEKLNKLKLVSVL
EQFFGTDRVLVLVRKLSKVQSSQALTLHLTNKQFKWVNELKNSIAKAQAE
EKNLYLVAQGEPNSGALGLMNCLKREAGGHFLRLYLILDEGVPQFSLDDP
FYAAQLAKDLVVNVYRNGSWGSYRHLKMESRPPMLPVEQAYVNTLVKGDL
SSLRWIESPRSSPIQSQLEPCTVYYAPLNFRDVMLASGKLGVDALPGDLA
YQDCVLGLEFAGRDSCGRRVMAMVTAKSLATNCLANRNLLWEVPSKWTME
QASTVPCVYATVYYALVVRGQMKEGERILIHAGSGGVGQAAISVALAHGL
TVFTTVGSKEKREFLLKRFPKLKAKNIGNSRDTSFEQLIMSETHGNGVEL
VLNSLSEEKLQASIRCLALNGRFLEIGKFDLSNNTPLGMSVFLKNTSFHG
ILLDSVMEGEEEMQLMVAKLVAEGIKSGAVQPLPTTVFAEQEIEKAFRFM
ASGKHIGKVVIKVRLEEEQQAALPRLRQIQAIPRSYMHPEKSYILVGGLG
GFGLELANWLVSRGARFLVLSSRSGVKSGYQALMIRRWHDRGVQVQIDTN
DVTTAVGCQRLLEVSNKLALVGGIFNLAAVLRDGLIEDQSPKNFEKVSAP
KLLATIHLDKISREICPALEYFVCFSSLSCGRGNMGQTNYGLANSTMERI
CEQRQEYGYPGTAIQWGAIGDTGLIIEHMGNNETVVGGTLPQRMISCLET
LDLFLQQPHPVMASMVVAEKRKTEQANRLSLIATIANIMGLRDVKSVSDK
TTLFDLGMDSLMSTEIKQTLERHFDLVLSAQEIRQLTFSALRQIDAQEPP
SASVSSPSASSTLSRIKEEACVEVQPQSDETRKVFAKEVLPQEVMVRLRS
KAPVASEDPAVFFLAPIEGFTIAVEALAASLTCPAYGLQCTEQVPLDSIE
ACAAYYLRQIQKLQPLGPYHIVGYSYGCLLAHAIAVALEQRRFGVKVIML
DGAPTMASGYVQEAKKQTDDLNRQQSMTLAYFGALLADVDYNQLLQLLDG
VQTWPSKLDKLADTLAGYTQQTREVIKKAACMFKQKLLLSESYKGAKQLH
SDVVLIKSAEHNAIMAQDYGLKEICSAQIDMHVVEGTHRTFLKEPHTLQI
IERVLRKRP*

GH22259.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:44:52
Subject Length Description Subject Range Query Range Score Percent Strand
v(2)k05816-PA 2409 CG3524-PA 1..2409 1..2409 12330 100 Plus
v(2)k05816-PB 2410 CG3524-PB 1..2410 1..2409 12318 100 Plus
CG3523-PC 2540 CG3523-PC 141..2537 18..2407 7559 60.8 Plus
CG3523-PA 2438 CG3523-PA 39..2435 18..2407 7559 60.8 Plus
CG17374-PC 2394 CG17374-PC 20..2369 18..2402 4237 39.3 Plus