BDGP Sequence Production Resources |
Search the DGRC for GH22341
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 223 |
Well: | 41 |
Vector: | pOT2 |
Associated Gene/Transcript | CG13603-RA |
Protein status: | GH22341.pep: gold |
Preliminary Size: | 1212 |
Sequenced Size: | 1088 |
Gene | Date | Evidence |
---|---|---|
CG13603 | 2001-01-01 | Release 2 assignment |
CG13603 | 2002-04-04 | Blastp of sequenced clone |
CG13603 | 2003-01-01 | Sim4 clustering to Release 3 |
CG13603 | 2008-04-29 | Release 5.5 accounting |
CG13603 | 2008-08-15 | Release 5.9 accounting |
CG13603 | 2008-12-18 | 5.12 accounting |
1088 bp (1088 high quality bases) assembled on 2002-04-04
GenBank Submission: AY095012
> GH22341.complete CTTATCGATAACACCAAAAGTGCATTGCCGTGTTTGTCTGAATATTGTGG AGTTTCATTTGTTTTTGTTGAAATCAAAAGCAAAATGGCTTTGGCCAACG TGCTGCAGCTAAGCCAGATAGCTGGCCATGTCATCCTGTTTATCCTGTCG CTGTGCATCGTCGTGCCATTGTTTATAAACCTCGACCAATTCTGTGGCCA CTGCCTGCTCTTTACAACTGGCAAATGGCGGGAGGAGGACGGCATGTTCG ATGTCCAGTGGGCTTCCAATGGCTTCTGCAACTTTCCCCTGATTACCGGG TTCTTCCTGCTAATTATTTCGGTGGTGCAGATTTATAGATACGCCCGCAT GAAGGAGGAGGCCTCGTTTATAGCTCTGTTCATTGACGTCGTTCTGGGCA TTTGGATGCTGGCTATGTCCATTTTGTCGGCTATTTTCATTACCCTGGGC TTTATTGTCTGGTGCGATTCCATGACCGAGAGATTCCCATCCTGTGCCAT TTCCGCCGGTCAGAACATTATCCACGGCGACACGGAAAAAATTAACACCT CCGGATTTTACATTGAAATGGGAACCACTCAGTTTGGCGCATGGGGTTCA TTCGCAATTTCCGTTGGCATCGCCGTCATCGCCCTTCTGAAACTGATCGA CAACCACCAGGTGCGCAACATCAAGGTTTCCATGTACTTGGAGCGACAGC GGTTGGTGAATCAGCAGCAGTACGACGGCAGGTCGACCCCGCCGATCGTT TCGAACGCATCCTCCGACACGGAACAGAACAAATAGTTGACGTTTGTGAT CAATCAGCAGCAGTTTGTAATTCTCTACGTATTTCTCATCATGTGCGTTA TAATCATTGTATGTCATTTCGTCCTCGTCCTTATCATTGAGGCAGACAAC CGGCAACACACATTATCTTTGTAGTGAAGGAAACTAGAGATATTAGCCCT ATGTATTAAGCCAACATACGTGATATGTAATGTATATATATATATATGTA TTTAATTAATTATTCCATGTTACAAATATAGTAAAACCAATTTTTTAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13603-RA | 1089 | CG13603-RA | 43..1089 | 1..1047 | 5205 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19808593..19809053 | 1040..580 | 2305 | 100 | Minus |
chr3R | 27901430 | chr3R | 19809231..19809478 | 582..335 | 1240 | 100 | Minus |
chr3R | 27901430 | chr3R | 19809751..19809944 | 194..1 | 970 | 100 | Minus |
chr3R | 27901430 | chr3R | 19809541..19809685 | 338..194 | 710 | 99.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23985211..23985679 | 1048..580 | 2315 | 99.6 | Minus |
3R | 32079331 | 3R | 23985856..23986103 | 582..335 | 1240 | 100 | Minus |
3R | 32079331 | 3R | 23986376..23986569 | 194..1 | 970 | 100 | Minus |
3R | 32079331 | 3R | 23986166..23986310 | 338..194 | 725 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23726042..23726510 | 1048..580 | 2315 | 99.5 | Minus |
3R | 31820162 | 3R | 23726687..23726934 | 582..335 | 1240 | 100 | Minus |
3R | 31820162 | 3R | 23727207..23727400 | 194..1 | 970 | 100 | Minus |
3R | 31820162 | 3R | 23726997..23727141 | 338..194 | 725 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
transib1 | 2167 | transib1 TRANSIB1 2167bp | 1910..1969 | 1041..984 | 132 | 73.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19809231..19809474 | 339..582 | 100 | <- | Minus |
chr3R | 19809541..19809684 | 195..338 | 99 | <- | Minus |
chr3R | 19809751..19809944 | 1..194 | 100 | Minus | |
chr3R | 19808587..19809050 | 583..1046 | 92 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13603-RA | 1..702 | 85..786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13603-RA | 1..702 | 85..786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13603-RA | 1..702 | 85..786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13603-RA | 1..702 | 85..786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13603-RA | 1..702 | 85..786 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13603-RA | 1..1046 | 1..1046 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13603-RA | 1..1046 | 1..1046 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13603-RA | 1..1046 | 1..1046 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13603-RA | 1..1046 | 1..1046 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13603-RA | 1..1046 | 1..1046 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23985213..23985676 | 583..1046 | 99 | <- | Minus |
3R | 23985856..23986099 | 339..582 | 100 | <- | Minus |
3R | 23986166..23986309 | 195..338 | 100 | <- | Minus |
3R | 23986376..23986569 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23985213..23985676 | 583..1046 | 99 | <- | Minus |
3R | 23985856..23986099 | 339..582 | 100 | <- | Minus |
3R | 23986166..23986309 | 195..338 | 100 | <- | Minus |
3R | 23986376..23986569 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23985213..23985676 | 583..1046 | 99 | <- | Minus |
3R | 23985856..23986099 | 339..582 | 100 | <- | Minus |
3R | 23986166..23986309 | 195..338 | 100 | <- | Minus |
3R | 23986376..23986569 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19810935..19811398 | 583..1046 | 99 | <- | Minus |
arm_3R | 19811578..19811821 | 339..582 | 100 | <- | Minus |
arm_3R | 19811888..19812031 | 195..338 | 100 | <- | Minus |
arm_3R | 19812098..19812291 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23726044..23726507 | 583..1046 | 99 | <- | Minus |
3R | 23726687..23726930 | 339..582 | 100 | <- | Minus |
3R | 23726997..23727140 | 195..338 | 100 | <- | Minus |
3R | 23727207..23727400 | 1..194 | 100 | Minus |
Translation from 0 to 785
> GH22341.hyp LIDNTKSALPCLSEYCGVSFVFVEIKSKMALANVLQLSQIAGHVILFILS LCIVVPLFINLDQFCGHCLLFTTGKWREEDGMFDVQWASNGFCNFPLITG FFLLIISVVQIYRYARMKEEASFIALFIDVVLGIWMLAMSILSAIFITLG FIVWCDSMTERFPSCAISAGQNIIHGDTEKINTSGFYIEMGTTQFGAWGS FAISVGIAVIALLKLIDNHQVRNIKVSMYLERQRLVNQQQYDGRSTPPIV SNASSDTEQNK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13603-PA | 233 | CG13603-PA | 1..233 | 29..261 | 1204 | 100 | Plus |
Translation from 84 to 785
> GH22341.pep MALANVLQLSQIAGHVILFILSLCIVVPLFINLDQFCGHCLLFTTGKWRE EDGMFDVQWASNGFCNFPLITGFFLLIISVVQIYRYARMKEEASFIALFI DVVLGIWMLAMSILSAIFITLGFIVWCDSMTERFPSCAISAGQNIIHGDT EKINTSGFYIEMGTTQFGAWGSFAISVGIAVIALLKLIDNHQVRNIKVSM YLERQRLVNQQQYDGRSTPPIVSNASSDTEQNK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17973-PA | 233 | GF17973-PA | 1..233 | 1..233 | 1180 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12385-PA | 233 | GG12385-PA | 1..233 | 1..233 | 1195 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23571-PA | 233 | GH23571-PA | 1..233 | 1..233 | 1053 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13603-PA | 233 | CG13603-PA | 1..233 | 1..233 | 1204 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23456-PA | 233 | GI23456-PA | 1..233 | 1..233 | 1105 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24158-PA | 233 | GL24158-PA | 1..233 | 1..233 | 1172 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12396-PA | 233 | GA12396-PA | 1..233 | 1..233 | 1172 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23522-PA | 233 | GM23522-PA | 1..233 | 1..233 | 1219 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18331-PA | 216 | GD18331-PA | 1..216 | 1..233 | 1054 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22577-PA | 233 | GJ22577-PA | 1..233 | 1..233 | 1118 | 89.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11600-PA | 235 | GK11600-PA | 1..235 | 1..233 | 1123 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10838-PA | 233 | GE10838-PA | 1..233 | 1..233 | 1207 | 97.4 | Plus |