BDGP Sequence Production Resources |
Search the DGRC for GH22690
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 226 |
Well: | 90 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1909-RA |
Protein status: | GH22690.pep: gold |
Preliminary Size: | 2260 |
Sequenced Size: | 2405 |
Gene | Date | Evidence |
---|---|---|
CG1909 | 2001-01-01 | Release 2 assignment |
CG1909 | 2001-07-04 | Blastp of sequenced clone |
CG1909 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1909 | 2008-04-29 | Release 5.5 accounting |
CG1909 | 2008-08-15 | Release 5.9 accounting |
CG1909 | 2008-12-18 | 5.12 accounting |
2405 bp (2405 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051576
> GH22690.complete CTCCAACAGGACTTGTAACATTGTCGGACGCGTAGTTTAAAGAAATATAT GTTCTTGCGGATTCAGCGGAGATGTAGAGTTGTAATACTGCATTCGGAAT TTTAGTAAATATCATTAACGACTATTTTAGGTACGCTCCAAAAAGATTGA AAAGAAAAGCAGCCTGCCATGTCATGGGAGAGCATTAACTCCAAGGATCT CCTTAGCATCCCACCAAGCCAGAATCTGTCTGCAACACGTTTACTTACAT CACCTGATGGATCTCGTTACCTATTGGAAAATTCAAGCGACTTGTGTCAC TTAGATGAGAGTTTTTCGCGGTTGGCGGGATATGGATCTAGTCCAGATGT AGGATCCCGTTCGGTATGGGCTAGCCAGGCGCTATTACGATCAGGTTCTG TTATCAGTTGCTTTTTGTCCTGCCAGCAAAGCCTAAGACAGTACATAGCT AAACGGAAGATCGAGCGAGGACGACGGCTATATGAACAAAACAATCAAAC GGAGGCCGTACGTACTTGGCGTAGTGCACTGAAAGGGACGTGCCAAAGAG AGGACTGCTTTCAGCTACTAGGATATTTGTATCAGGCACATATGGACTGG GGAAAATTTCGTGAGGCAATAGAATTCAGTCATCAGCAGCTCGGAATTTC AGAGGAGCTTGATTCGCCAAATATGAGAGCCGAGACGTACTTAAATCTCA GCAGGGCACACGCCAGCTTGGGAGGCTTAGAGCGATCACTGAGTTATGCC AGGCACTCACTTTACAATGAGTGCGGCACTAAATGCAGAAGTGGACTTGT CCATTTGACGGTTGCACGTGTATACCTAGAAATGGGTGGGTTCTCTAGGG CTTTGGAGGGTTTGCAGGGTGCCTACAAAATTGCTACAGCTATTGGAGAT CCATCACTGGAGTTACAAGTGTATGTCGCGCTTTCTGAGCTTTTCGGACG CCTTCAGGATAACGATAAAAGTGCAACATACGCTTCTAAAGCCTACGACT TATCACGATCCCTGCAACTCGGTGACCTAAACTCATGCCACCATAGAGCA GCTCTATTGCGAATGGCGGTTTCTCTCCGAAAGCAGGGTGAGCTTGGAGA TGCACAAGATTATTGTAAGGAGGCCACGAAGCTTTCCCTTATTTCTGGAG ACCAGGCGACTTACACGAGAAGTATTCGCGTCATGGGCGACATATACCGA AATAAAATGGACATGGATCGTGCATTCCGGCAATATGAACAAGCTATGGG TACATCGGCAAGCTTAGGGGATCGTATGGCCCAAATGGAGGCTATGGATG GAGCAGCTCGTTGCTTGGAAACACTCCGTCTACAGAACAAGATCTGCAAC TGCAGACCACTAGAATTTAACACAAGACTTCTGGAAGTTGCCAGCTCAAT TGGAGCCAAGTTTCTGGTTCGCAAAATTCGTTGCCGACTGGCATTGATCT ACCGGGCACTAGGAGACGAAGATCAATACAACACTCATTTTAGACTAGCT AATCAGACGGATGCTGCGTTAGGCTTAAATTGCGGAGCGTGTGGGGAGTT GCTTGGACTTCGTCCAGAAAACTTGGAAGCTCTACCCTGTGCACACATTC TTCATGCAAGATGCGCCTATGAAATCTTGCGACGGCGGGAGAAAAATGCC CCGCGATCATGCCCCGCCTGCAACAAGCTGATCAGCTCACGCACACATTT CTGCGGCAGCGTTCCGGTTGAAAGTGAAAGCACCGACAGGTGCGTCACAG CTGCTTCCACCTTCAATACGAATTCTTTGTCGGTCGACGGCCTCCTAGGG ATAAACTCCGACATCCTTTTACCTTCGGCTGCGTTTTGCTACGTTAAGAA TCCAGCTCTAGATACCGAAAACAGCGCTCTCCTATCTCCCAAAGTCATTT ACCACAGCAACTTATCATTGGCATCTCTAAGTATGCGTGCATCTAGCCTG ACGATCGATAGCGGCCAAAATGTGACGTCATCTGTGTGAAAGAAACAACT CCACTTTGAGCACCTAAACGTTGGACGATCGTGTTATCGTGCAATATCTG GAAGAATCCGGATTTTATCGCTTGTTATTATAGATAGATCGATTTTCTTT TGAATTATAGATTTTTGCATTTTAAATGCTAACAGAAGTTTTTGTTCTAG TTCTAAGCGTGTTACGAACAACTGAGACATAAGCATTTGAACTACTGCTT ATGCTTAAATCCTAACTTGTTTCTTTACTACAGTACCTTATCCAAACAAG TACTTGTCACGTATTGTGTATTGTCGTAGGCTAAAATTAATTCGCACTTA CATGCTAGATTGTTCTTACATTTAGAGTATGAATGTGCACACACAAAAGT TGTTTAAAATAAATCGTTACTATGTGTTATTAACACCAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1909-RA | 2556 | CG1909-RA | 141..2529 | 1..2389 | 11945 | 100 | Plus |
CG1909.a | 2473 | CG1909.a | 211..2473 | 127..2389 | 11300 | 99.9 | Plus |
CG1909-RB | 2465 | CG1909-RB | 188..2445 | 132..2389 | 11290 | 100 | Plus |
CG1909-RB | 2465 | CG1909-RB | 84..187 | 1..104 | 520 | 100 | Plus |
CG1909.a | 2473 | CG1909.a | 21..101 | 1..81 | 405 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr4 | 1351717 | chr4 | 609119..609897 | 1609..2387 | 3895 | 100 | Plus |
chr4 | 1351717 | chr4 | 605846..606322 | 644..1120 | 2385 | 100 | Plus |
chr4 | 1351717 | chr4 | 608390..608591 | 1409..1610 | 1010 | 100 | Plus |
chr4 | 1351717 | chr4 | 607451..607642 | 1219..1410 | 960 | 100 | Plus |
chr4 | 1351717 | chr4 | 605537..605723 | 458..644 | 935 | 100 | Plus |
chr4 | 1351717 | chr4 | 605310..605480 | 289..459 | 855 | 100 | Plus |
chr4 | 1351717 | chr4 | 603671..603801 | 1..131 | 655 | 100 | Plus |
chr4 | 1351717 | chr4 | 606387..606487 | 1118..1218 | 505 | 100 | Plus |
chr4 | 1351717 | chr4 | 604482..604567 | 204..289 | 430 | 100 | Plus |
chr4 | 1351717 | chr4 | 604337..604412 | 131..206 | 380 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
4 | 1348131 | 4 | 588570..589350 | 1609..2389 | 3905 | 100 | Plus |
4 | 1348131 | 4 | 585297..585773 | 644..1120 | 2385 | 100 | Plus |
4 | 1348131 | 4 | 587841..588042 | 1409..1610 | 1010 | 100 | Plus |
4 | 1348131 | 4 | 586902..587093 | 1219..1410 | 960 | 100 | Plus |
4 | 1348131 | 4 | 584988..585174 | 458..644 | 935 | 100 | Plus |
4 | 1348131 | 4 | 584761..584931 | 289..459 | 855 | 100 | Plus |
4 | 1348131 | 4 | 583122..583252 | 1..131 | 655 | 100 | Plus |
4 | 1348131 | 4 | 585838..585938 | 1118..1218 | 505 | 100 | Plus |
4 | 1348131 | 4 | 583933..584018 | 204..289 | 430 | 100 | Plus |
4 | 1348131 | 4 | 583788..583863 | 131..206 | 380 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
4 | 1331231 | 4 | 588570..589350 | 1609..2389 | 3905 | 100 | Plus |
4 | 1331231 | 4 | 585297..585773 | 644..1120 | 2385 | 100 | Plus |
4 | 1331231 | 4 | 587841..588042 | 1409..1610 | 1010 | 100 | Plus |
4 | 1331231 | 4 | 586902..587093 | 1219..1410 | 960 | 100 | Plus |
4 | 1331231 | 4 | 584988..585174 | 458..644 | 935 | 100 | Plus |
4 | 1331231 | 4 | 584761..584931 | 289..459 | 855 | 100 | Plus |
4 | 1331231 | 4 | 583122..583252 | 1..131 | 655 | 100 | Plus |
4 | 1331231 | 4 | 585838..585938 | 1118..1218 | 505 | 100 | Plus |
4 | 1331231 | 4 | 583933..584018 | 204..289 | 430 | 100 | Plus |
4 | 1331231 | 4 | 583788..583863 | 131..206 | 380 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
1360 | 3409 | 1360 1360 3409bp | 3008..3085 | 2146..2069 | 128 | 65.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr4 | 603671..603801 | 1..131 | 100 | -> | Plus |
chr4 | 604338..604412 | 132..206 | 100 | -> | Plus |
chr4 | 604485..604567 | 207..289 | 100 | -> | Plus |
chr4 | 605311..605480 | 290..459 | 100 | -> | Plus |
chr4 | 605539..605723 | 460..644 | 100 | -> | Plus |
chr4 | 605847..606321 | 645..1119 | 100 | -> | Plus |
chr4 | 606389..606487 | 1120..1218 | 100 | -> | Plus |
chr4 | 607451..607642 | 1219..1410 | 100 | -> | Plus |
chr4 | 608392..608591 | 1411..1610 | 100 | -> | Plus |
chr4 | 609121..609897 | 1611..2387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1909-RB | 1..1821 | 169..1989 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1909-RB | 1..1821 | 169..1989 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1909-RA | 1..1821 | 169..1989 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1909-RB | 1..1821 | 169..1989 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1909-RA | 1..1821 | 169..1989 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1909-RA | 12..2398 | 1..2387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1909-RA | 12..2398 | 1..2387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1909-RA | 15..2401 | 1..2387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1909-RA | 12..2398 | 1..2387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1909-RA | 15..2401 | 1..2387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 584990..585174 | 460..644 | 100 | -> | Plus |
4 | 583122..583252 | 1..131 | 100 | -> | Plus |
4 | 583789..583863 | 132..206 | 100 | -> | Plus |
4 | 583936..584018 | 207..289 | 100 | -> | Plus |
4 | 584762..584931 | 290..459 | 100 | -> | Plus |
4 | 585298..585772 | 645..1119 | 100 | -> | Plus |
4 | 585840..585938 | 1120..1218 | 100 | -> | Plus |
4 | 586902..587093 | 1219..1410 | 100 | -> | Plus |
4 | 587843..588042 | 1411..1610 | 100 | -> | Plus |
4 | 588572..589348 | 1611..2387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 584990..585174 | 460..644 | 100 | -> | Plus |
4 | 583122..583252 | 1..131 | 100 | -> | Plus |
4 | 583789..583863 | 132..206 | 100 | -> | Plus |
4 | 583936..584018 | 207..289 | 100 | -> | Plus |
4 | 584762..584931 | 290..459 | 100 | -> | Plus |
4 | 585298..585772 | 645..1119 | 100 | -> | Plus |
4 | 585840..585938 | 1120..1218 | 100 | -> | Plus |
4 | 586902..587093 | 1219..1410 | 100 | -> | Plus |
4 | 587843..588042 | 1411..1610 | 100 | -> | Plus |
4 | 588572..589348 | 1611..2387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 584990..585174 | 460..644 | 100 | -> | Plus |
4 | 583122..583252 | 1..131 | 100 | -> | Plus |
4 | 583789..583863 | 132..206 | 100 | -> | Plus |
4 | 583936..584018 | 207..289 | 100 | -> | Plus |
4 | 584762..584931 | 290..459 | 100 | -> | Plus |
4 | 585298..585772 | 645..1119 | 100 | -> | Plus |
4 | 585840..585938 | 1120..1218 | 100 | -> | Plus |
4 | 586902..587093 | 1219..1410 | 100 | -> | Plus |
4 | 587843..588042 | 1411..1610 | 100 | -> | Plus |
4 | 588572..589348 | 1611..2387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_4 | 605388..605557 | 290..459 | 100 | -> | Plus |
arm_4 | 604415..604489 | 132..206 | 100 | -> | Plus |
arm_4 | 604562..604644 | 207..289 | 100 | -> | Plus |
arm_4 | 603748..603878 | 1..131 | 100 | -> | Plus |
arm_4 | 605616..605800 | 460..644 | 100 | -> | Plus |
arm_4 | 605924..606398 | 645..1119 | 100 | -> | Plus |
arm_4 | 606466..606564 | 1120..1218 | 100 | -> | Plus |
arm_4 | 607528..607719 | 1219..1410 | 100 | -> | Plus |
arm_4 | 608469..608668 | 1411..1610 | 100 | -> | Plus |
arm_4 | 609198..609974 | 1611..2387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
4 | 585298..585772 | 645..1119 | 100 | -> | Plus |
4 | 585840..585938 | 1120..1218 | 100 | -> | Plus |
4 | 586902..587093 | 1219..1410 | 100 | -> | Plus |
4 | 587843..588042 | 1411..1610 | 100 | -> | Plus |
4 | 588572..589348 | 1611..2387 | 100 | Plus | |
4 | 583122..583252 | 1..131 | 100 | -> | Plus |
4 | 583789..583863 | 132..206 | 100 | -> | Plus |
4 | 583936..584018 | 207..289 | 100 | -> | Plus |
4 | 584762..584931 | 290..459 | 100 | -> | Plus |
4 | 584990..585174 | 460..644 | 100 | -> | Plus |
Translation from 168 to 1988
> GH22690.hyp MSWESINSKDLLSIPPSQNLSATRLLTSPDGSRYLLENSSDLCHLDESFS RLAGYGSSPDVGSRSVWASQALLRSGSVISCFLSCQQSLRQYIAKRKIER GRRLYEQNNQTEAVRTWRSALKGTCQREDCFQLLGYLYQAHMDWGKFREA IEFSHQQLGISEELDSPNMRAETYLNLSRAHASLGGLERSLSYARHSLYN ECGTKCRSGLVHLTVARVYLEMGGFSRALEGLQGAYKIATAIGDPSLELQ VYVALSELFGRLQDNDKSATYASKAYDLSRSLQLGDLNSCHHRAALLRMA VSLRKQGELGDAQDYCKEATKLSLISGDQATYTRSIRVMGDIYRNKMDMD RAFRQYEQAMGTSASLGDRMAQMEAMDGAARCLETLRLQNKICNCRPLEF NTRLLEVASSIGAKFLVRKIRCRLALIYRALGDEDQYNTHFRLANQTDAA LGLNCGACGELLGLRPENLEALPCAHILHARCAYEILRRREKNAPRSCPA CNKLISSRTHFCGSVPVESESTDRCVTAASTFNTNSLSVDGLLGINSDIL LPSAAFCYVKNPALDTENSALLSPKVIYHSNLSLASLSMRASSLTIDSGQ NVTSSV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1909-PB | 606 | CG1909-PB | 1..606 | 1..606 | 3113 | 100 | Plus |
CG1909-PA | 606 | CG1909-PA | 1..606 | 1..606 | 3113 | 100 | Plus |
CG43163-PC | 2523 | CG43163-PC | 210..622 | 101..473 | 181 | 21.8 | Plus |
CG43163-PD | 2523 | CG43163-PD | 210..622 | 101..473 | 181 | 21.8 | Plus |
Translation from 168 to 1988
> GH22690.pep MSWESINSKDLLSIPPSQNLSATRLLTSPDGSRYLLENSSDLCHLDESFS RLAGYGSSPDVGSRSVWASQALLRSGSVISCFLSCQQSLRQYIAKRKIER GRRLYEQNNQTEAVRTWRSALKGTCQREDCFQLLGYLYQAHMDWGKFREA IEFSHQQLGISEELDSPNMRAETYLNLSRAHASLGGLERSLSYARHSLYN ECGTKCRSGLVHLTVARVYLEMGGFSRALEGLQGAYKIATAIGDPSLELQ VYVALSELFGRLQDNDKSATYASKAYDLSRSLQLGDLNSCHHRAALLRMA VSLRKQGELGDAQDYCKEATKLSLISGDQATYTRSIRVMGDIYRNKMDMD RAFRQYEQAMGTSASLGDRMAQMEAMDGAARCLETLRLQNKICNCRPLEF NTRLLEVASSIGAKFLVRKIRCRLALIYRALGDEDQYNTHFRLANQTDAA LGLNCGACGELLGLRPENLEALPCAHILHARCAYEILRRREKNAPRSCPA CNKLISSRTHFCGSVPVESESTDRCVTAASTFNTNSLSVDGLLGINSDIL LPSAAFCYVKNPALDTENSALLSPKVIYHSNLSLASLSMRASSLTIDSGQ NVTSSV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22689-PA | 449 | GF22689-PA | 1..351 | 1..350 | 1614 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16394-PA | 606 | GG16394-PA | 1..606 | 1..606 | 3098 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24018-PA | 639 | GH24018-PA | 1..639 | 1..606 | 2524 | 77.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1909-PB | 606 | CG1909-PB | 1..606 | 1..606 | 3113 | 100 | Plus |
CG1909-PA | 606 | CG1909-PA | 1..606 | 1..606 | 3113 | 100 | Plus |
CG43163-PC | 2523 | CG43163-PC | 210..622 | 101..473 | 181 | 21.8 | Plus |
CG43163-PD | 2523 | CG43163-PD | 210..622 | 101..473 | 181 | 21.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14051-PA | 635 | GI14051-PA | 1..635 | 1..606 | 2481 | 77.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18145-PA | 614 | GL18145-PA | 1..614 | 1..606 | 2744 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15125-PA | 614 | GA15125-PA | 1..614 | 1..606 | 2744 | 85.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26802-PA | 606 | GM26802-PA | 1..606 | 1..606 | 3164 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24408-PA | 543 | GD24408-PA | 1..543 | 1..606 | 2549 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19847-PA | 629 | GJ19847-PA | 1..629 | 1..606 | 2523 | 78.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13691-PA | 611 | GK13691-PA | 1..611 | 1..606 | 2605 | 82.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14554-PA | 605 | GE14554-PA | 1..605 | 1..606 | 3074 | 95.7 | Plus |