BDGP Sequence Production Resources |
Search the DGRC for GH22719
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 227 |
Well: | 19 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1942-RA |
Protein status: | GH22719.pep: gold |
Preliminary Size: | 1380 |
Sequenced Size: | 1280 |
Gene | Date | Evidence |
---|---|---|
CG1942 | 2001-01-01 | Release 2 assignment |
CG1942 | 2001-11-29 | Blastp of sequenced clone |
CG1942 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1942 | 2008-04-29 | Release 5.5 accounting |
CG1942 | 2008-08-15 | Release 5.9 accounting |
CG1942 | 2008-12-18 | 5.12 accounting |
1280 bp (1280 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069178
> GH22719.complete CCGAGAGCCGATAAGGATAAGTATAAGTCTAGTACAGGGCAATTTGACCA TCGCTGGCTTCCATATCATTCAGTCGTGGGAGAACCGCCGAAAGAGCAGC TGGTGGAGTTTTTTTGGGCATTTTTGTAACACAGCAGACATGAAAATCGA GTGGGCACCACTGCGGGTTCCTCTGGAACGCCGACTGCAGATACTGGTCA CGGCCTTTTTCACCTCCATGCTGCTGATACTATTGTCAGTTTCCTTCCTT TTGGTAGCTGGATCACTGATCTACGGAGGTCTTTTGGTGCGTAGTCTGAT GGTAACTTACTTGGCCTACGTCTTTGTGCACCACAAGAAAACCCAATCCG TTGTGGATGGCAATGGCTGGATGATAACACGCACCAACCTTTTGCATCGC CACTATCGTGATTACTTTCCCGTGGAGCTGGTGAAAACAGCCGAACTGCC AGCTACTAAGAACTACATCTTGGCCAGCTTTCCCCACGGAATTCTGGGCA CAGGCATTGGCATTAACATGGGCTTGGAAATCTCCAAGTGGCTGGAGCTA TTCCCCCAAGTGCGTCCCAAACTGGGCACTCTGGATCAGCATTTCCATGT TCCGTTCATGCGTGAGGTCCTCCGCTGCTGGGGTCTGGTGTCAGTGTCCA AAGAGGCGCTGATCCGTATGCTCAGCAAGTCAAATGATCCCAAGCACAAG GATAATCGGGATGGTTTCACCTCCAATGCGGTGGCCATTCTGGTTGGCGG TGCCCAGGAAGCCATGGACTCTCATCCTGGGCAGTACATTTTAACCTTGA AGAATAGGAAAGGCTTCGTGCGAATGGCCATTAGAACGGGCTCATCGATT GTTCCTTCATTTTCCTTTGGAGAGGTGGACATTTTCGATCAGGTGGCAAA TCCCCCCAACTCGCTGCTCCGACGGTTTCAGGACTTTGTCAAGAAGCTCA CCGGAGTCTCTCCGCTGATTCCTGTGGGCCGCGGATTCTTCAACTACACC TTTGGCTTCCTCCCATTCCGACGACGCATTGTCCAAGTTGTTGGTGCTCC CATCGATGTTGTTAAGAACGAGCACCCAGACTCGGAGTATGTGGATAAAG TGCATGGACAGGTCATTGAGTCGCTGGAGAAGTTATTCGATCAGTACAAA GACAAGTACTTGGAGAATTCGAAGAGTGCCACTCTAGTTGTACACTAGTT TTAAATCATGTTGATACAAAATATTCCTATGTATTGAAATAGAAACGAGC TTTTTAATTGAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1942-RA | 1441 | CG1942-RA | 133..1394 | 1..1262 | 6310 | 100 | Plus |
CG1941-RA | 1444 | CG1941-RA | 658..1148 | 669..1159 | 895 | 78.8 | Plus |
CG1941.a | 1528 | CG1941.a | 742..1232 | 669..1159 | 895 | 78.8 | Plus |
CG1941-RA | 1444 | CG1941-RA | 386..577 | 397..588 | 375 | 79.6 | Plus |
CG1941.a | 1528 | CG1941.a | 470..661 | 397..588 | 375 | 79.6 | Plus |
CG1941-RA | 1444 | CG1941-RA | 300..360 | 311..371 | 155 | 83.6 | Plus |
CG1941.a | 1528 | CG1941.a | 384..444 | 311..371 | 155 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3600622..3600964 | 498..840 | 1700 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 3599941..3600208 | 1..268 | 1340 | 100 | Plus |
chr2R | 21145070 | chr2R | 3601280..3601500 | 1040..1260 | 1090 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 3601021..3601221 | 840..1040 | 990 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 3600424..3600556 | 366..498 | 665 | 100 | Plus |
chr2R | 21145070 | chr2R | 3600268..3600366 | 268..366 | 495 | 100 | Plus |
chr2R | 21145070 | chr2R | 3603208..3603517 | 510..819 | 485 | 77.1 | Plus |
chr2R | 21145070 | chr2R | 3598397..3598728 | 503..834 | 430 | 75.3 | Plus |
chr2R | 21145070 | chr2R | 3598799..3598994 | 845..1040 | 425 | 81.1 | Plus |
chr2R | 21145070 | chr2R | 3603601..3603796 | 845..1040 | 320 | 77.6 | Plus |
chr2R | 21145070 | chr2R | 3598197..3598298 | 397..498 | 225 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 7713304..7713646 | 498..840 | 1715 | 100 | Plus |
2R | 25286936 | 2R | 7712623..7712890 | 1..268 | 1340 | 100 | Plus |
2R | 25286936 | 2R | 7713962..7714184 | 1040..1262 | 1115 | 100 | Plus |
2R | 25286936 | 2R | 7713703..7713903 | 840..1040 | 1005 | 100 | Plus |
2R | 25286936 | 2R | 7713106..7713238 | 366..498 | 665 | 100 | Plus |
2R | 25286936 | 2R | 7712950..7713048 | 268..366 | 495 | 100 | Plus |
2R | 25286936 | 2R | 7715890..7716199 | 510..819 | 485 | 77.1 | Plus |
2R | 25286936 | 2R | 7711079..7711410 | 503..834 | 430 | 75.3 | Plus |
2R | 25286936 | 2R | 7711481..7711676 | 845..1040 | 425 | 81.1 | Plus |
2R | 25286936 | 2R | 7716283..7716478 | 845..1040 | 320 | 77.6 | Plus |
2R | 25286936 | 2R | 7710879..7710980 | 397..498 | 225 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 7714503..7714845 | 498..840 | 1715 | 100 | Plus |
2R | 25260384 | 2R | 7713822..7714089 | 1..268 | 1340 | 100 | Plus |
2R | 25260384 | 2R | 7715161..7715383 | 1040..1262 | 1115 | 100 | Plus |
2R | 25260384 | 2R | 7714902..7715102 | 840..1040 | 1005 | 100 | Plus |
2R | 25260384 | 2R | 7714305..7714437 | 366..498 | 665 | 100 | Plus |
2R | 25260384 | 2R | 7714149..7714247 | 268..366 | 495 | 100 | Plus |
2R | 25260384 | 2R | 7717250..7717398 | 671..819 | 445 | 86.5 | Plus |
2R | 25260384 | 2R | 7712680..7712875 | 845..1040 | 425 | 81.1 | Plus |
2R | 25260384 | 2R | 7712444..7712609 | 669..834 | 335 | 80.1 | Plus |
2R | 25260384 | 2R | 7717482..7717677 | 845..1040 | 320 | 77.5 | Plus |
2R | 25260384 | 2R | 7712078..7712179 | 397..498 | 225 | 81.3 | Plus |
2R | 25260384 | 2R | 7712278..7712363 | 503..588 | 160 | 79 | Plus |
2R | 25260384 | 2R | 7712941..7713060 | 1040..1159 | 150 | 75 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
jockey2 | 3428 | jockey2 JOCKEY2 3428bp | 2830..2879 | 833..784 | 115 | 70 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3600269..3600366 | 269..366 | 100 | -> | Plus |
chr2R | 3600425..3600556 | 367..498 | 100 | -> | Plus |
chr2R | 3599941..3600208 | 1..268 | 100 | -> | Plus |
chr2R | 3600623..3600964 | 499..840 | 99 | -> | Plus |
chr2R | 3601022..3601221 | 841..1040 | 99 | -> | Plus |
chr2R | 3601281..3601500 | 1041..1260 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1942-RA | 1..1059 | 140..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1942-RA | 1..1059 | 140..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1942-RA | 1..1059 | 140..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1942-RA | 1..1059 | 140..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1942-RA | 1..1059 | 140..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1942-RA | 1..1260 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1942-RA | 1..1260 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1942-RA | 46..1305 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1942-RA | 1..1260 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1942-RA | 46..1305 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7712623..7712890 | 1..268 | 100 | -> | Plus |
2R | 7712951..7713048 | 269..366 | 100 | -> | Plus |
2R | 7713107..7713238 | 367..498 | 100 | -> | Plus |
2R | 7713305..7713646 | 499..840 | 100 | -> | Plus |
2R | 7713704..7713903 | 841..1040 | 100 | -> | Plus |
2R | 7713963..7714182 | 1041..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7712623..7712890 | 1..268 | 100 | -> | Plus |
2R | 7712951..7713048 | 269..366 | 100 | -> | Plus |
2R | 7713107..7713238 | 367..498 | 100 | -> | Plus |
2R | 7713305..7713646 | 499..840 | 100 | -> | Plus |
2R | 7713704..7713903 | 841..1040 | 100 | -> | Plus |
2R | 7713963..7714182 | 1041..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7712623..7712890 | 1..268 | 100 | -> | Plus |
2R | 7712951..7713048 | 269..366 | 100 | -> | Plus |
2R | 7713107..7713238 | 367..498 | 100 | -> | Plus |
2R | 7713305..7713646 | 499..840 | 100 | -> | Plus |
2R | 7713704..7713903 | 841..1040 | 100 | -> | Plus |
2R | 7713963..7714182 | 1041..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3600456..3600553 | 269..366 | 100 | -> | Plus |
arm_2R | 3600612..3600743 | 367..498 | 100 | -> | Plus |
arm_2R | 3601209..3601408 | 841..1040 | 100 | -> | Plus |
arm_2R | 3601468..3601687 | 1041..1260 | 100 | Plus | |
arm_2R | 3600810..3601151 | 499..840 | 100 | -> | Plus |
arm_2R | 3600128..3600395 | 1..268 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7713822..7714089 | 1..268 | 100 | -> | Plus |
2R | 7714150..7714247 | 269..366 | 100 | -> | Plus |
2R | 7714306..7714437 | 367..498 | 100 | -> | Plus |
2R | 7714504..7714845 | 499..840 | 100 | -> | Plus |
2R | 7714903..7715102 | 841..1040 | 100 | -> | Plus |
2R | 7715162..7715381 | 1041..1260 | 100 | Plus |
Translation from 0 to 1197
> GH22719.hyp REPIRISISLVQGNLTIAGFHIIQSWENRRKSSWWSFFGHFCNTADMKIE WAPLRVPLERRLQILVTAFFTSMLLILLSVSFLLVAGSLIYGGLLVRSLM VTYLAYVFVHHKKTQSVVDGNGWMITRTNLLHRHYRDYFPVELVKTAELP ATKNYILASFPHGILGTGIGINMGLEISKWLELFPQVRPKLGTLDQHFHV PFMREVLRCWGLVSVSKEALIRMLSKSNDPKHKDNRDGFTSNAVAILVGG AQEAMDSHPGQYILTLKNRKGFVRMAIRTGSSIVPSFSFGEVDIFDQVAN PPNSLLRRFQDFVKKLTGVSPLIPVGRGFFNYTFGFLPFRRRIVQVVGAP IDVVKNEHPDSEYVDKVHGQVIESLEKLFDQYKDKYLENSKSATLVVH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1942-PA | 352 | CG1942-PA | 1..352 | 47..398 | 1819 | 100 | Plus |
CG1941-PD | 352 | CG1941-PD | 1..352 | 47..398 | 1376 | 73 | Plus |
CG1941-PC | 352 | CG1941-PC | 1..352 | 47..398 | 1376 | 73 | Plus |
CG1941-PB | 352 | CG1941-PB | 1..352 | 47..398 | 1376 | 73 | Plus |
CG1941-PA | 352 | CG1941-PA | 1..352 | 47..398 | 1376 | 73 | Plus |
Translation from 139 to 1197
> GH22719.pep MKIEWAPLRVPLERRLQILVTAFFTSMLLILLSVSFLLVAGSLIYGGLLV RSLMVTYLAYVFVHHKKTQSVVDGNGWMITRTNLLHRHYRDYFPVELVKT AELPATKNYILASFPHGILGTGIGINMGLEISKWLELFPQVRPKLGTLDQ HFHVPFMREVLRCWGLVSVSKEALIRMLSKSNDPKHKDNRDGFTSNAVAI LVGGAQEAMDSHPGQYILTLKNRKGFVRMAIRTGSSIVPSFSFGEVDIFD QVANPPNSLLRRFQDFVKKLTGVSPLIPVGRGFFNYTFGFLPFRRRIVQV VGAPIDVVKNEHPDSEYVDKVHGQVIESLEKLFDQYKDKYLENSKSATLV VH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13198-PA | 352 | GF13198-PA | 1..352 | 1..352 | 1622 | 86.6 | Plus |
Dana\GF13197-PA | 352 | GF13197-PA | 1..352 | 1..352 | 1403 | 72.7 | Plus |
Dana\GF13199-PA | 351 | GF13199-PA | 1..351 | 1..352 | 1251 | 65.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23299-PA | 352 | GG23299-PA | 1..352 | 1..352 | 1794 | 95.2 | Plus |
Dere\GG23298-PA | 352 | GG23298-PA | 1..352 | 1..352 | 1398 | 72.2 | Plus |
Dere\GG23300-PA | 349 | GG23300-PA | 1..349 | 1..352 | 1281 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20316-PA | 352 | GH20316-PA | 1..352 | 1..352 | 1348 | 70.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgat2-PA | 352 | CG1942-PA | 1..352 | 1..352 | 1819 | 100 | Plus |
CG1941-PD | 352 | CG1941-PD | 1..352 | 1..352 | 1376 | 73 | Plus |
CG1941-PC | 352 | CG1941-PC | 1..352 | 1..352 | 1376 | 73 | Plus |
CG1941-PB | 352 | CG1941-PB | 1..352 | 1..352 | 1376 | 73 | Plus |
CG1941-PA | 352 | CG1941-PA | 1..352 | 1..352 | 1376 | 73 | Plus |
CG1946-PA | 349 | CG1946-PA | 1..348 | 1..351 | 1255 | 67.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19988-PA | 352 | GI19988-PA | 1..352 | 1..352 | 1141 | 59.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10526-PA | 352 | GL10526-PA | 1..352 | 1..352 | 1539 | 79.5 | Plus |
Dper\GL10527-PA | 352 | GL10527-PA | 1..352 | 1..352 | 1409 | 72.7 | Plus |
Dper\GL10836-PA | 352 | GL10836-PA | 1..352 | 1..352 | 1398 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15143-PA | 352 | GA15143-PA | 1..352 | 1..352 | 1539 | 79.5 | Plus |
Dpse\GA24395-PA | 352 | GA24395-PA | 1..352 | 1..352 | 1413 | 72.7 | Plus |
Dpse\GA15142-PA | 352 | GA15142-PA | 1..352 | 1..352 | 1397 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20977-PA | 352 | GM20977-PA | 1..352 | 1..352 | 1819 | 97.2 | Plus |
Dsec\GM20976-PA | 352 | GM20976-PA | 1..352 | 1..352 | 1412 | 72.4 | Plus |
Dsec\GM20978-PA | 349 | GM20978-PA | 1..349 | 1..352 | 1277 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10505-PA | 352 | GD10505-PA | 1..352 | 1..352 | 1842 | 98.6 | Plus |
Dsim\GD10504-PA | 352 | GD10504-PA | 1..352 | 1..352 | 1405 | 72.2 | Plus |
Dsim\GD15355-PA | 349 | GD15355-PA | 1..349 | 1..352 | 1280 | 68.2 | Plus |
Dsim\GD15354-PA | 253 | GD15354-PA | 1..251 | 1..261 | 1274 | 93.5 | Plus |
Dsim\GD10506-PA | 349 | GD10506-PA | 1..349 | 1..352 | 1270 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21238-PA | 352 | GJ21238-PA | 1..352 | 1..352 | 1399 | 71.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21715-PA | 352 | GK21715-PA | 1..352 | 1..352 | 1427 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19145-PA | 352 | GE19145-PA | 1..352 | 1..352 | 1815 | 97.2 | Plus |
Dyak\GE19144-PA | 352 | GE19144-PA | 1..352 | 1..352 | 1407 | 72.4 | Plus |
Dyak\GE19146-PA | 349 | GE19146-PA | 1..349 | 1..352 | 1270 | 68.2 | Plus |